RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 CCDC61Q9Y6R9 512 aa6.47□□□□□ -1.37
TCF4-215ENST00000562638 PTMSP20962 102 aa6.46□□□□□ -1.38
TCF4-215ENST00000562638 ATN1P54259 1190 aaPredicted RBP6.46□□□□□ -1.38
TCF4-215ENST00000562638 NBPF20Q3BBV1 942 aa6.46□□□□□ -1.38
TCF4-215ENST00000562638 CARD10Q9BWT7 1032 aa6.46□□□□□ -1.38
TCF4-215ENST00000562638 SUPT5HO00267 1087 aaKnown RBP6.45□□□□□ -1.38
TCF4-215ENST00000562638 SOX12O15370 315 aa6.45□□□□□ -1.38
TCF4-215ENST00000562638 MTERF4Q7Z6M4 381 aaKnown RBP6.45□□□□□ -1.38
TCF4-215ENST00000562638 KIF12Q96FN5 646 aa6.45□□□□□ -1.38
TCF4-215ENST00000562638 PSMD1Q99460 953 aa6.45□□□□□ -1.38
TCF4-215ENST00000562638 GTPBP4Q9BZE4 634 aaKnown RBP6.45□□□□□ -1.38
TCF4-215ENST00000562638 POTEFA5A3E0 1075 aa6.44□□□□□ -1.38
TCF4-215ENST00000562638 MAFGO15525 162 aa6.44□□□□□ -1.38
TCF4-215ENST00000562638 DNAJC2Q99543 621 aaKnown RBP6.44□□□□□ -1.38
TCF4-215ENST00000562638 GEMIN8Q9NWZ8 242 aaKnown RBP6.44□□□□□ -1.38
TCF4-215ENST00000562638 GOLGA6L3A6NEY3 463 aa6.43□□□□□ -1.38
TCF4-215ENST00000562638 VGLL3A8MV65 326 aa6.43□□□□□ -1.38
TCF4-215ENST00000562638 LETM1O95202 739 aaPredicted RBP6.43□□□□□ -1.38
TCF4-215ENST00000562638 ZSCAN20P17040 1043 aaPredicted RBP6.43□□□□□ -1.38
TCF4-215ENST00000562638 TRPC6Q9Y210 931 aa6.43□□□□□ -1.38
TCF4-215ENST00000562638 WRNQ14191 1432 aaPredicted RBP eCLIP6.42□□□□□ -1.38
TCF4-215ENST00000562638 LCE2DQ5TA82 110 aaPredicted RBP6.42□□□□□ -1.38
TCF4-215ENST00000562638 EGFL6Q8IUX8 553 aa6.42□□□□□ -1.38
TCF4-215ENST00000562638 PRDM16Q9HAZ2 1276 aa6.42□□□□□ -1.38
TCF4-215ENST00000562638 ZHX1Q9UKY1 873 aaPredicted RBP6.42□□□□□ -1.38
TCF4-215ENST00000562638 L1TD1Q5T7N2 865 aaKnown RBP6.41□□□□□ -1.38
TCF4-215ENST00000562638 MAMSTRQ6ZN01 415 aa6.41□□□□□ -1.38
TCF4-215ENST00000562638 CFAP44Q96MT7 982 aa6.41□□□□□ -1.38
TCF4-215ENST00000562638 CCER2I3L3R5 266 aa6.4□□□□□ -1.38
TCF4-215ENST00000562638 MAP3K13O43283 966 aa6.4□□□□□ -1.38
TCF4-215ENST00000562638 RALBP1Q15311 655 aa6.4□□□□□ -1.38
TCF4-215ENST00000562638 NFKBIBQ15653 356 aa6.4□□□□□ -1.38
TCF4-215ENST00000562638 NBPF11Q86T75 865 aa6.4□□□□□ -1.38
TCF4-215ENST00000562638 CERS3Q8IU89 383 aa6.4□□□□□ -1.38
TCF4-215ENST00000562638 BMP2KQ9NSY1 1161 aaPredicted RBP6.4□□□□□ -1.38
TCF4-215ENST00000562638 ZCCHC6Q5VYS8 1495 aaKnown RBP6.4□□□□□ -1.39
TCF4-215ENST00000562638 PATL2C9JE40 543 aaKnown RBP6.39□□□□□ -1.39
TCF4-215ENST00000562638 NBPF1Q3BBV0 1214 aa6.39□□□□□ -1.39
TCF4-215ENST00000562638 FAM163AQ96GL9 167 aaPredicted RBP6.39□□□□□ -1.39
TCF4-215ENST00000562638 TTC36A6NLP5 189 aa6.38□□□□□ -1.39
TCF4-215ENST00000562638 TNNT2P45379 298 aaPredicted RBP6.38□□□□□ -1.39
TCF4-215ENST00000562638 RIPK4P57078 832 aa6.38□□□□□ -1.39
TCF4-215ENST00000562638 ANAPC15P60006 121 aa6.38□□□□□ -1.39
TCF4-215ENST00000562638 RASEFQ8IZ41 740 aa6.38□□□□□ -1.39
TCF4-215ENST00000562638 PCDH10Q9P2E7 1040 aa6.38□□□□□ -1.39
TCF4-215ENST00000562638 TCERG1O14776 1098 aaKnown RBP6.37□□□□□ -1.39
TCF4-215ENST00000562638 SH3BP1Q9Y3L3 701 aa6.37□□□□□ -1.39
TCF4-215ENST00000562638 LAS1LQ9Y4W2 734 aaKnown RBP6.37□□□□□ -1.39
TCF4-215ENST00000562638 NACADO15069 1562 aa6.36□□□□□ -1.39
TCF4-215ENST00000562638 CC2D1BQ5T0F9 858 aaKnown RBP6.36□□□□□ -1.39
TCF4-215ENST00000562638 NGEFQ8N5V2 710 aa6.36□□□□□ -1.39
TCF4-215ENST00000562638 GPATCH11Q8N954 259 aa6.36□□□□□ -1.39
TCF4-215ENST00000562638 COLQQ9Y215 455 aaPredicted RBP6.36□□□□□ -1.39
TCF4-215ENST00000562638 APPP05067 770 aa6.35□□□□□ -1.39
TCF4-215ENST00000562638 TIE1P35590 1138 aa6.35□□□□□ -1.39
TCF4-215ENST00000562638 HSP90AB3PQ58FF7 597 aa6.35□□□□□ -1.39
TCF4-215ENST00000562638 DNTTIP2Q5QJE6 756 aaKnown RBP6.35□□□□□ -1.39
TCF4-215ENST00000562638 KCNH8Q96L42 1107 aa6.35□□□□□ -1.39
TCF4-215ENST00000562638 SCUBE2Q9NQ36 999 aa6.35□□□□□ -1.39
TCF4-215ENST00000562638 ZBED9Q6R2W3 1325 aa6.34□□□□□ -1.39
TCF4-215ENST00000562638 FSD2A1L4K1 749 aa6.34□□□□□ -1.39
TCF4-215ENST00000562638 NBPF9Q3BBW0 867 aa6.34□□□□□ -1.39
TCF4-215ENST00000562638 PEG3Q9GZU2 1588 aa6.33□□□□□ -1.4
TCF4-215ENST00000562638 TTLL13PA6NNM8 815 aa6.33□□□□□ -1.4
TCF4-215ENST00000562638 ESPNB1AK53 854 aa6.33□□□□□ -1.4
TCF4-215ENST00000562638 IRF6O14896 467 aa6.33□□□□□ -1.4
TCF4-215ENST00000562638 IRX5P78411 483 aaPredicted RBP6.33□□□□□ -1.4
TCF4-215ENST00000562638 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.33□□□□□ -1.4
TCF4-215ENST00000562638 CCDC94Q9BW85 323 aaPredicted RBP6.33□□□□□ -1.4
TCF4-215ENST00000562638 RAI14Q9P0K7 980 aa6.33□□□□□ -1.4
TCF4-215ENST00000562638 OFD1O75665 1012 aa6.32□□□□□ -1.4
TCF4-215ENST00000562638 NBPF10Q6P3W6 841 aaKnown RBP6.32□□□□□ -1.4
TCF4-215ENST00000562638 BSDC1Q9NW68 430 aaPredicted RBP6.32□□□□□ -1.4
TCF4-215ENST00000562638 TULP2O00295 520 aa6.31□□□□□ -1.4
TCF4-215ENST00000562638 SATB1Q01826 763 aa6.31□□□□□ -1.4
TCF4-215ENST00000562638 OS9Q13438 667 aaPredicted RBP6.31□□□□□ -1.4
TCF4-215ENST00000562638 EFCC1Q9HA90 598 aa6.31□□□□□ -1.4
TCF4-215ENST00000562638 PHLDB1Q86UU1 1377 aa6.31□□□□□ -1.4
TCF4-215ENST00000562638 SEMA3FQ13275 785 aa6.3□□□□□ -1.4
TCF4-215ENST00000562638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.3□□□□□ -1.4
TCF4-215ENST00000562638 OTUD6BQ8N6M0 293 aa6.3□□□□□ -1.4
TCF4-215ENST00000562638 TSPYL1Q9H0U9 437 aa6.3□□□□□ -1.4
TCF4-215ENST00000562638 CFAP65Q6ZU64 1925 aaKnown RBP6.3□□□□□ -1.4
TCF4-215ENST00000562638 DYNC1I1O14576 645 aa6.29□□□□□ -1.4
TCF4-215ENST00000562638 SEC24BO95487 1268 aa6.29□□□□□ -1.4
TCF4-215ENST00000562638 MS4A1P11836 297 aa6.29□□□□□ -1.4
TCF4-215ENST00000562638 NUBP1P53384 320 aa6.29□□□□□ -1.4
TCF4-215ENST00000562638 KIAA1211Q6ZU35 1233 aa6.29□□□□□ -1.4
TCF4-215ENST00000562638 MKL1Q969V6 931 aa6.29□□□□□ -1.4
TCF4-215ENST00000562638 CWC22Q9HCG8 908 aaKnown RBP6.29□□□□□ -1.4
TCF4-215ENST00000562638 TRIM35Q9UPQ4 493 aa6.29□□□□□ -1.4
TCF4-215ENST00000562638 ERBB4Q15303 1308 aa6.28□□□□□ -1.4
TCF4-215ENST00000562638 RNF123Q5XPI4 1314 aa6.28□□□□□ -1.4
TCF4-215ENST00000562638 PLEKHD1A6NEE1 506 aa6.28□□□□□ -1.4
TCF4-215ENST00000562638 MAP2K1Q02750 393 aaPredicted RBP6.28□□□□□ -1.4
TCF4-215ENST00000562638 SGIP1Q9BQI5 828 aa6.28□□□□□ -1.4
TCF4-215ENST00000562638 PCDHB13Q9Y5F0 798 aa6.28□□□□□ -1.4
TCF4-215ENST00000562638 E9PSI1 815 aa6.27□□□□□ -1.41
TCF4-215ENST00000562638 XRCC6P12956 609 aaKnown RBP eCLIP6.27□□□□□ -1.41
TCF4-215ENST00000562638 ZKSCAN8Q15776 578 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms