RNA–Protein interactions for RNA: ENST00000562261.1

KLHDC4-208, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-208ENST00000562261 APLP2Q06481 763 aa23.89■■□□□ 1.41
KLHDC4-208ENST00000562261 ZNF142P52746 1687 aaPredicted RBP23.88■■□□□ 1.41
KLHDC4-208ENST00000562261 FAM135AQ9P2D6 1515 aa23.88■■□□□ 1.41
KLHDC4-208ENST00000562261 PTPRTO14522 1441 aa23.87■■□□□ 1.41
KLHDC4-208ENST00000562261 NCOA1Q15788 1441 aa23.87■■□□□ 1.41
KLHDC4-208ENST00000562261 KDM5DQ9BY66 1539 aa23.86■■□□□ 1.41
KLHDC4-208ENST00000562261 CAMSAP1Q5T5Y3 1602 aa23.86■■□□□ 1.41
KLHDC4-208ENST00000562261 CEP170BQ9Y4F5 1589 aaPredicted RBP23.84■■□□□ 1.41
KLHDC4-208ENST00000562261 LTBP4Q8N2S1 1624 aa23.82■■□□□ 1.4
KLHDC4-208ENST00000562261 PTPN23Q9H3S7 1636 aa23.81■■□□□ 1.4
KLHDC4-208ENST00000562261 RNF17Q9BXT8 1623 aaKnown RBP23.8■■□□□ 1.4
KLHDC4-208ENST00000562261 WASHC2CQ9Y4E1 1318 aa23.8■■□□□ 1.4
KLHDC4-208ENST00000562261 EIF2AK4Q9P2K8 1649 aaKnown RBP23.79■■□□□ 1.4
KLHDC4-208ENST00000562261 PZPP20742 1482 aa23.79■■□□□ 1.4
KLHDC4-208ENST00000562261 PLA2R1Q13018 1463 aa23.78■■□□□ 1.4
KLHDC4-208ENST00000562261 CROCC2H7BZ55 1655 aa23.77■■□□□ 1.4
KLHDC4-208ENST00000562261 A2ML1A8K2U0 1454 aa23.76■■□□□ 1.39
KLHDC4-208ENST00000562261 IQSEC2Q5JU85 1478 aa23.76■■□□□ 1.39
KLHDC4-208ENST00000562261 SHANK2Q9UPX8 1470 aa23.75■■□□□ 1.39
KLHDC4-208ENST00000562261 TNRQ92752 1358 aa23.75■■□□□ 1.39
KLHDC4-208ENST00000562261 ABCC5O15440 1437 aa23.75■■□□□ 1.39
KLHDC4-208ENST00000562261 FGD6Q6ZV73 1430 aa23.75■■□□□ 1.39
KLHDC4-208ENST00000562261 DUOX2Q9NRD8 1548 aa23.74■■□□□ 1.39
KLHDC4-208ENST00000562261 FBXO31Q5XUX0 539 aaPredicted RBP23.74■■□□□ 1.39
KLHDC4-208ENST00000562261 DNMT1P26358 1616 aaKnown RBP23.73■■□□□ 1.39
KLHDC4-208ENST00000562261 ZC3H13Q5T200 1668 aaKnown RBP23.73■■□□□ 1.39
KLHDC4-208ENST00000562261 NCKAP5LQ9HCH0 1330 aa23.73■■□□□ 1.39
KLHDC4-208ENST00000562261 TCOF1Q13428 1488 aaKnown RBP23.73■■□□□ 1.39
KLHDC4-208ENST00000562261 MROH1Q8NDA8 1641 aa23.71■■□□□ 1.39
KLHDC4-208ENST00000562261 ABCC3O15438 1527 aa23.71■■□□□ 1.39
KLHDC4-208ENST00000562261 DAPK1P53355 1430 aa23.71■■□□□ 1.39
KLHDC4-208ENST00000562261 UBAP1LF5GYI3 381 aa23.71■■□□□ 1.39
KLHDC4-208ENST00000562261 PKD2Q13563 968 aa23.71■■□□□ 1.39
KLHDC4-208ENST00000562261 KIF15Q9NS87 1388 aa23.69■■□□□ 1.38
KLHDC4-208ENST00000562261 ERBINQ96RT1 1412 aa23.67■■□□□ 1.38
KLHDC4-208ENST00000562261 NLRP1Q9C000 1473 aa23.66■■□□□ 1.38
KLHDC4-208ENST00000562261 ZNF335Q9H4Z2 1342 aaPredicted RBP23.65■■□□□ 1.38
KLHDC4-208ENST00000562261 CEP152O94986 1710 aa23.65■■□□□ 1.38
KLHDC4-208ENST00000562261 RRP7BPQ9NSQ0 103 aa23.64■■□□□ 1.37
KLHDC4-208ENST00000562261 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.37
KLHDC4-208ENST00000562261 POLR1AO95602 1720 aaPredicted RBP23.62■■□□□ 1.37
KLHDC4-208ENST00000562261 ERVK-7P63135 1459 aa23.61■■□□□ 1.37
KLHDC4-208ENST00000562261 UGGT1Q9NYU2 1555 aa23.61■■□□□ 1.37
KLHDC4-208ENST00000562261 DEPDC5O75140 1603 aa23.59■■□□□ 1.37
KLHDC4-208ENST00000562261 ANKRD30AQ9BXX3 1397 aa23.59■■□□□ 1.37
KLHDC4-208ENST00000562261 NEURL4Q96JN8 1562 aa23.58■■□□□ 1.37
KLHDC4-208ENST00000562261 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.57■■□□□ 1.36
KLHDC4-208ENST00000562261 THEMISQ8N1K5 641 aaPredicted RBP23.57■■□□□ 1.36
KLHDC4-208ENST00000562261 CHIC2Q9UKJ5 165 aa23.57■■□□□ 1.36
KLHDC4-208ENST00000562261 CFAP65Q6ZU64 1925 aaKnown RBP23.55■■□□□ 1.36
KLHDC4-208ENST00000562261 ARHGAP31Q2M1Z3 1444 aa23.54■■□□□ 1.36
KLHDC4-208ENST00000562261 ADGRL2O95490 1459 aa23.54■■□□□ 1.36
KLHDC4-208ENST00000562261 SCAF1Q9H7N4 1312 aaKnown RBP23.54■■□□□ 1.36
KLHDC4-208ENST00000562261 FAM50AQ14320 339 aaKnown RBP23.53■■□□□ 1.36
KLHDC4-208ENST00000562261 ANKLE2Q86XL3 938 aa23.53■■□□□ 1.36
KLHDC4-208ENST00000562261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.52■■□□□ 1.362e-6■■■□□ 15.9
KLHDC4-208ENST00000562261 KANK1Q14678 1352 aa23.52■■□□□ 1.36
KLHDC4-208ENST00000562261 HSPA1LP34931 641 aa23.5■■□□□ 1.35
KLHDC4-208ENST00000562261 MED14O60244 1454 aa23.49■■□□□ 1.35
KLHDC4-208ENST00000562261 PIP4K2BP78356 416 aa23.49■■□□□ 1.35
KLHDC4-208ENST00000562261 LMTK2Q8IWU2 1503 aa23.49■■□□□ 1.35
KLHDC4-208ENST00000562261 VWDEQ8N2E2 1590 aa23.48■■□□□ 1.35
KLHDC4-208ENST00000562261 UBR1Q8IWV7 1749 aa23.48■■□□□ 1.35
KLHDC4-208ENST00000562261 NPHP4O75161 1426 aaPredicted RBP23.47■■□□□ 1.35
KLHDC4-208ENST00000562261 MED1Q15648 1581 aaPredicted RBP23.47■■□□□ 1.35
KLHDC4-208ENST00000562261 IQGAP1P46940 1657 aa23.45■■□□□ 1.34
KLHDC4-208ENST00000562261 ANKRD50Q9ULJ7 1429 aa23.43■■□□□ 1.34
KLHDC4-208ENST00000562261 CPS1P31327 1500 aa23.43■■□□□ 1.34
KLHDC4-208ENST00000562261 EFCAB6Q5THR3 1501 aa23.4■■□□□ 1.34
KLHDC4-208ENST00000562261 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
KLHDC4-208ENST00000562261 PIK3C2BO00750 1634 aa23.4■■□□□ 1.34
KLHDC4-208ENST00000562261 SLIT1O75093 1534 aa23.39■■□□□ 1.34
KLHDC4-208ENST00000562261 TOM1O60784 492 aa23.39■■□□□ 1.33
KLHDC4-208ENST00000562261 ARHGAP23Q9P227 1491 aa23.38■■□□□ 1.33
KLHDC4-208ENST00000562261 SCAF11Q99590 1463 aaKnown RBP23.37■■□□□ 1.33
KLHDC4-208ENST00000562261 SYNMO15061 1565 aa23.36■■□□□ 1.33
KLHDC4-208ENST00000562261 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
KLHDC4-208ENST00000562261 NOS1P29475 1434 aa23.34■■□□□ 1.33
KLHDC4-208ENST00000562261 ROCK1Q13464 1354 aa23.34■■□□□ 1.33
KLHDC4-208ENST00000562261 LTKP29376 864 aa23.33■■□□□ 1.33
KLHDC4-208ENST00000562261 UNC13BO14795 1591 aa23.32■■□□□ 1.32
KLHDC4-208ENST00000562261 RPRD2Q5VT52 1461 aaKnown RBP23.32■■□□□ 1.32
KLHDC4-208ENST00000562261 IDI1Q13907 227 aa23.32■■□□□ 1.32
KLHDC4-208ENST00000562261 TXNDC2Q86VQ3 553 aa23.32■■□□□ 1.32
KLHDC4-208ENST00000562261 PPARGC1BQ86YN6 1023 aaKnown RBP23.32■■□□□ 1.32
KLHDC4-208ENST00000562261 STAG3Q9UJ98 1225 aa23.32■■□□□ 1.32
KLHDC4-208ENST00000562261 TET3O43151 1660 aa23.32■■□□□ 1.32
KLHDC4-208ENST00000562261 TMEM2Q9UHN6 1383 aa23.31■■□□□ 1.32
KLHDC4-208ENST00000562261 STRCP1A6NGW2 1772 aa23.31■■□□□ 1.32
KLHDC4-208ENST00000562261 EID1Q9Y6B2 187 aa23.3■■□□□ 1.32
KLHDC4-208ENST00000562261 GCC2Q8IWJ2 1684 aa23.28■■□□□ 1.32
KLHDC4-208ENST00000562261 ADGRB3O60242 1522 aa23.28■■□□□ 1.32
KLHDC4-208ENST00000562261 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
KLHDC4-208ENST00000562261 SLC52A1Q9NWF4 448 aa23.26■■□□□ 1.31
KLHDC4-208ENST00000562261 ITGAEP38570 1179 aa23.25■■□□□ 1.31
KLHDC4-208ENST00000562261 LRRC7Q96NW7 1537 aa23.24■■□□□ 1.31
KLHDC4-208ENST00000562261 IQGAP3Q86VI3 1631 aa23.23■■□□□ 1.31
KLHDC4-208ENST00000562261 E9PCH4 1651 aa23.22■■□□□ 1.31
KLHDC4-208ENST00000562261 ALKQ9UM73 1620 aa23.19■■□□□ 1.3
KLHDC4-208ENST00000562261 RRBP1Q9P2E9 1410 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms