RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 DHX29Q7Z478 1369 aaKnown RBP16.52■□□□□ 0.24
BBS4-205ENST00000562219 ZNF335Q9H4Z2 1342 aaPredicted RBP16.52■□□□□ 0.24
BBS4-205ENST00000562219 ARHGEF5Q12774 1597 aa16.51■□□□□ 0.23
BBS4-205ENST00000562219 PZPP20742 1482 aa16.5■□□□□ 0.23
BBS4-205ENST00000562219 NEURL4Q96JN8 1562 aa16.5■□□□□ 0.23
BBS4-205ENST00000562219 ILDR2Q71H61 639 aa16.49■□□□□ 0.23
BBS4-205ENST00000562219 ZC3H13Q5T200 1668 aaKnown RBP16.47■□□□□ 0.23
BBS4-205ENST00000562219 RNF17Q9BXT8 1623 aaKnown RBP16.47■□□□□ 0.23
BBS4-205ENST00000562219 TNRQ92752 1358 aa16.47■□□□□ 0.23
BBS4-205ENST00000562219 KIF3BO15066 747 aa16.45■□□□□ 0.22
BBS4-205ENST00000562219 EIF2AK4Q9P2K8 1649 aaKnown RBP16.45■□□□□ 0.22
BBS4-205ENST00000562219 MAST1Q9Y2H9 1570 aa16.44■□□□□ 0.22
BBS4-205ENST00000562219 SOCS7O14512 581 aa16.44■□□□□ 0.22
BBS4-205ENST00000562219 RSPH4AQ5TD94 716 aa16.44■□□□□ 0.22
BBS4-205ENST00000562219 DEPDC5O75140 1603 aa16.44■□□□□ 0.22
BBS4-205ENST00000562219 CPS1P31327 1500 aa16.44■□□□□ 0.22
BBS4-205ENST00000562219 NLRP1Q9C000 1473 aa16.43■□□□□ 0.22
BBS4-205ENST00000562219 UBAP1LF5GYI3 381 aa16.43■□□□□ 0.22
BBS4-205ENST00000562219 UGGT1Q9NYU2 1555 aa16.42■□□□□ 0.22
BBS4-205ENST00000562219 WASHC2CQ9Y4E1 1318 aa16.42■□□□□ 0.22
BBS4-205ENST00000562219 IQGAP1P46940 1657 aa16.41■□□□□ 0.22
BBS4-205ENST00000562219 FBXO31Q5XUX0 539 aaPredicted RBP16.41■□□□□ 0.22
BBS4-205ENST00000562219 LRRC9Q6ZRR7 1453 aa16.41■□□□□ 0.22
BBS4-205ENST00000562219 CEP152O94986 1710 aa16.4■□□□□ 0.22
BBS4-205ENST00000562219 ABCC3O15438 1527 aa16.4■□□□□ 0.22
BBS4-205ENST00000562219 VWDEQ8N2E2 1590 aa16.39■□□□□ 0.21
BBS4-205ENST00000562219 VPS8Q8N3P4 1428 aa16.39■□□□□ 0.21
BBS4-205ENST00000562219 SHANK2Q9UPX8 1470 aa16.39■□□□□ 0.21
BBS4-205ENST00000562219 CFAP65Q6ZU64 1925 aaKnown RBP16.39■□□□□ 0.21
BBS4-205ENST00000562219 MIA2Q96PC5 1412 aa16.38■□□□□ 0.21
BBS4-205ENST00000562219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.38■□□□□ 0.21
BBS4-205ENST00000562219 MROH1Q8NDA8 1641 aa16.37■□□□□ 0.21
BBS4-205ENST00000562219 CROCC2H7BZ55 1655 aa16.37■□□□□ 0.21
BBS4-205ENST00000562219 MED14O60244 1454 aa16.37■□□□□ 0.21
BBS4-205ENST00000562219 TSPY4P0CV99 314 aa16.37■□□□□ 0.21
BBS4-205ENST00000562219 TSPY10P0CW01 314 aa16.37■□□□□ 0.21
BBS4-205ENST00000562219 MAP3K1Q13233 1512 aa16.36■□□□□ 0.21
BBS4-205ENST00000562219 UBR1Q8IWV7 1749 aa16.35■□□□□ 0.21
BBS4-205ENST00000562219 STRCP1A6NGW2 1772 aa16.35■□□□□ 0.21
BBS4-205ENST00000562219 NPHP4O75161 1426 aaPredicted RBP16.35■□□□□ 0.21
BBS4-205ENST00000562219 ANKLE2Q86XL3 938 aa16.34■□□□□ 0.21
BBS4-205ENST00000562219 THEMISQ8N1K5 641 aaPredicted RBP16.34■□□□□ 0.21
BBS4-205ENST00000562219 SYNMO15061 1565 aa16.34■□□□□ 0.21
BBS4-205ENST00000562219 MYOM3Q5VTT5 1437 aa16.33■□□□□ 0.2
BBS4-205ENST00000562219 ERVK-7P63135 1459 aa16.33■□□□□ 0.2
BBS4-205ENST00000562219 MED1Q15648 1581 aaPredicted RBP16.32■□□□□ 0.2
BBS4-205ENST00000562219 DUOX2Q9NRD8 1548 aa16.32■□□□□ 0.2
BBS4-205ENST00000562219 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
BBS4-205ENST00000562219 PRDM15P57071 1507 aaPredicted RBP16.3■□□□□ 0.2
BBS4-205ENST00000562219 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
BBS4-205ENST00000562219 TOM1O60784 492 aa16.3■□□□□ 0.2
BBS4-205ENST00000562219 HSPA1LP34931 641 aa16.28■□□□□ 0.2
BBS4-205ENST00000562219 PIP4K2BP78356 416 aa16.28■□□□□ 0.2
BBS4-205ENST00000562219 PTPN23Q9H3S7 1636 aa16.27■□□□□ 0.19
BBS4-205ENST00000562219 KANK4Q5T7N3 995 aaPredicted RBP16.26■□□□□ 0.19
BBS4-205ENST00000562219 ERBINQ96RT1 1412 aa16.25■□□□□ 0.19
BBS4-205ENST00000562219 SLIT1O75093 1534 aa16.24■□□□□ 0.19
BBS4-205ENST00000562219 LRRC7Q96NW7 1537 aa16.24■□□□□ 0.19
BBS4-205ENST00000562219 KDM5AP29375 1690 aaKnown RBP16.24■□□□□ 0.19
BBS4-205ENST00000562219 XIRP1Q702N8 1843 aaKnown RBP16.24■□□□□ 0.19
BBS4-205ENST00000562219 SCAF11Q99590 1463 aaKnown RBP16.24■□□□□ 0.19
BBS4-205ENST00000562219 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
BBS4-205ENST00000562219 ARHGAP31Q2M1Z3 1444 aa16.23■□□□□ 0.19
BBS4-205ENST00000562219 KIF15Q9NS87 1388 aa16.23■□□□□ 0.19
BBS4-205ENST00000562219 ARHGAP23Q9P227 1491 aa16.22■□□□□ 0.19
BBS4-205ENST00000562219 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
BBS4-205ENST00000562219 ABCC5O15440 1437 aa16.2■□□□□ 0.18
BBS4-205ENST00000562219 DAPK1P53355 1430 aa16.19■□□□□ 0.18
BBS4-205ENST00000562219 LMTK2Q8IWU2 1503 aa16.16■□□□□ 0.18
BBS4-205ENST00000562219 FGD6Q6ZV73 1430 aa16.16■□□□□ 0.18
BBS4-205ENST00000562219 EFCAB6Q5THR3 1501 aa16.15■□□□□ 0.18
BBS4-205ENST00000562219 RRP7BPQ9NSQ0 103 aa16.15■□□□□ 0.18
BBS4-205ENST00000562219 KANK1Q14678 1352 aa16.14■□□□□ 0.17
BBS4-205ENST00000562219 LTKP29376 864 aa16.14■□□□□ 0.17
BBS4-205ENST00000562219 TXNDC2Q86VQ3 553 aa16.14■□□□□ 0.17
BBS4-205ENST00000562219 TMEM2Q9UHN6 1383 aa16.13■□□□□ 0.17
BBS4-205ENST00000562219 APLP2Q06481 763 aa16.12■□□□□ 0.17
BBS4-205ENST00000562219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
BBS4-205ENST00000562219 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
BBS4-205ENST00000562219 EID1Q9Y6B2 187 aa16.12■□□□□ 0.17
BBS4-205ENST00000562219 ADGRB3O60242 1522 aa16.12■□□□□ 0.17
BBS4-205ENST00000562219 MYO5BQ9ULV0 1848 aa16.12■□□□□ 0.17
BBS4-205ENST00000562219 ANKRD30AQ9BXX3 1397 aa16.12■□□□□ 0.17
BBS4-205ENST00000562219 TET3O43151 1660 aa16.09■□□□□ 0.17
BBS4-205ENST00000562219 ADGRL2O95490 1459 aa16.09■□□□□ 0.17
BBS4-205ENST00000562219 NWD1Q149M9 1564 aa16.09■□□□□ 0.17
BBS4-205ENST00000562219 SENP3Q9H4L4 574 aaPredicted RBP16.08■□□□□ 0.16
BBS4-205ENST00000562219 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
BBS4-205ENST00000562219 GCC2Q8IWJ2 1684 aa16.08■□□□□ 0.16
BBS4-205ENST00000562219 NOS1P29475 1434 aa16.07■□□□□ 0.16
BBS4-205ENST00000562219 ROBO1Q9Y6N7 1651 aa16.07■□□□□ 0.16
BBS4-205ENST00000562219 NKTRP30414 1462 aaKnown RBP16.05■□□□□ 0.16
BBS4-205ENST00000562219 RPRD2Q5VT52 1461 aaKnown RBP16.05■□□□□ 0.16
BBS4-205ENST00000562219 CHIC2Q9UKJ5 165 aa16.05■□□□□ 0.16
BBS4-205ENST00000562219 CHD2O14647 1828 aaKnown RBP16.04■□□□□ 0.16
BBS4-205ENST00000562219 IDI1Q13907 227 aa16.04■□□□□ 0.16
BBS4-205ENST00000562219 FAM135BQ49AJ0 1406 aa16.03■□□□□ 0.16
BBS4-205ENST00000562219 TMEM94Q12767 1356 aa16.03■□□□□ 0.16
BBS4-205ENST00000562219 UNC13BO14795 1591 aa16.02■□□□□ 0.16
BBS4-205ENST00000562219 TMEM131LA2VDJ0 1609 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms