RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 ZMYM4Q5VZL5 1548 aa20.78■□□□□ 0.92
CNN2-204ENST00000562075 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
CNN2-204ENST00000562075 IQGAP3Q86VI3 1631 aa20.78■□□□□ 0.92
CNN2-204ENST00000562075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.77■□□□□ 0.92
CNN2-204ENST00000562075 DIP2CQ9Y2E4 1556 aa20.76■□□□□ 0.91
CNN2-204ENST00000562075 PKD2Q13563 968 aa20.76■□□□□ 0.91
CNN2-204ENST00000562075 FOXD1Q16676 465 aa20.76■□□□□ 0.91
CNN2-204ENST00000562075 DEPDC5O75140 1603 aa20.75■□□□□ 0.91
CNN2-204ENST00000562075 ANKRD30BQ9BXX2 1392 aa20.73■□□□□ 0.91
CNN2-204ENST00000562075 KIF3BO15066 747 aa20.73■□□□□ 0.91
CNN2-204ENST00000562075 TRHP20396 242 aaPredicted RBP20.72■□□□□ 0.91
CNN2-204ENST00000562075 TIMELESSQ9UNS1 1208 aa20.71■□□□□ 0.91
CNN2-204ENST00000562075 KANK1Q14678 1352 aa20.71■□□□□ 0.91
CNN2-204ENST00000562075 YEATS2Q9ULM3 1422 aa20.7■□□□□ 0.9
CNN2-204ENST00000562075 PRDM15P57071 1507 aaPredicted RBP20.69■□□□□ 0.9
CNN2-204ENST00000562075 RNF17Q9BXT8 1623 aaKnown RBP20.69■□□□□ 0.9
CNN2-204ENST00000562075 BCORL1Q5H9F3 1711 aa20.69■□□□□ 0.9
CNN2-204ENST00000562075 TONSLQ96HA7 1378 aa20.69■□□□□ 0.9
CNN2-204ENST00000562075 MROH1Q8NDA8 1641 aa20.68■□□□□ 0.9
CNN2-204ENST00000562075 COL17A1Q9UMD9 1497 aaPredicted RBP20.68■□□□□ 0.9
CNN2-204ENST00000562075 VWDEQ8N2E2 1590 aa20.67■□□□□ 0.9
CNN2-204ENST00000562075 ATP10AO60312 1499 aa20.64■□□□□ 0.89
CNN2-204ENST00000562075 RPRD2Q5VT52 1461 aaKnown RBP20.64■□□□□ 0.89
CNN2-204ENST00000562075 TET3O43151 1660 aa20.64■□□□□ 0.89
CNN2-204ENST00000562075 ARHGEF40Q8TER5 1519 aa20.63■□□□□ 0.89
CNN2-204ENST00000562075 REREQ9P2R6 1566 aa20.61■□□□□ 0.89
CNN2-204ENST00000562075 E9PCH4 1651 aa20.59■□□□□ 0.89
CNN2-204ENST00000562075 LMTK2Q8IWU2 1503 aa20.58■□□□□ 0.89
CNN2-204ENST00000562075 GGT6Q6P531 493 aa20.58■□□□□ 0.89
CNN2-204ENST00000562075 CEP152O94986 1710 aa20.58■□□□□ 0.88
CNN2-204ENST00000562075 AGLP35573 1532 aa20.55■□□□□ 0.88
CNN2-204ENST00000562075 EFCAB6Q5THR3 1501 aa20.55■□□□□ 0.88
CNN2-204ENST00000562075 PPP1R15AO75807 674 aaPredicted RBP20.55■□□□□ 0.88
CNN2-204ENST00000562075 CCDC144AA2RUR9 1427 aa20.54■□□□□ 0.88
CNN2-204ENST00000562075 PLA2R1Q13018 1463 aa20.54■□□□□ 0.88
CNN2-204ENST00000562075 ABCC3O15438 1527 aa20.53■□□□□ 0.88
CNN2-204ENST00000562075 ZC3H13Q5T200 1668 aaKnown RBP20.52■□□□□ 0.88
CNN2-204ENST00000562075 SPHKAPQ2M3C7 1700 aa20.52■□□□□ 0.88
CNN2-204ENST00000562075 L3MBTL2Q969R5 705 aa20.51■□□□□ 0.87
CNN2-204ENST00000562075 WASHC2CQ9Y4E1 1318 aa20.51■□□□□ 0.87
CNN2-204ENST00000562075 TRPM2O94759 1503 aa20.5■□□□□ 0.87
CNN2-204ENST00000562075 CAMSAP1Q5T5Y3 1602 aa20.49■□□□□ 0.87
CNN2-204ENST00000562075 PTPRTO14522 1441 aa20.49■□□□□ 0.87
CNN2-204ENST00000562075 SIGLEC1Q9BZZ2 1709 aa20.48■□□□□ 0.87
CNN2-204ENST00000562075 NPATQ14207 1427 aa20.44■□□□□ 0.86
CNN2-204ENST00000562075 CLTCL1P53675 1640 aa20.43■□□□□ 0.86
CNN2-204ENST00000562075 ZNF316A6NFI3 1004 aaPredicted RBP20.43■□□□□ 0.86
CNN2-204ENST00000562075 PPP6R1Q9UPN7 881 aa20.42■□□□□ 0.86
CNN2-204ENST00000562075 ARHGAP31Q2M1Z3 1444 aa20.41■□□□□ 0.86
CNN2-204ENST00000562075 ARID4BQ4LE39 1312 aaPredicted RBP20.39■□□□□ 0.85
CNN2-204ENST00000562075 MLECQ14165 292 aa20.39■□□□□ 0.85
CNN2-204ENST00000562075 CNTLNQ9NXG0 1405 aa20.38■□□□□ 0.85
CNN2-204ENST00000562075 CLTCQ00610 1675 aaKnown RBP20.38■□□□□ 0.85
CNN2-204ENST00000562075 UGGT1Q9NYU2 1555 aa20.36■□□□□ 0.85
CNN2-204ENST00000562075 SPATA31E1Q6ZUB1 1445 aa20.36■□□□□ 0.85
CNN2-204ENST00000562075 RGL3Q3MIN7 710 aa20.35■□□□□ 0.85
CNN2-204ENST00000562075 CFAP65Q6ZU64 1925 aaKnown RBP20.35■□□□□ 0.85
CNN2-204ENST00000562075 NOS1P29475 1434 aa20.35■□□□□ 0.85
CNN2-204ENST00000562075 NBPF8Q3BBV2 869 aa20.34■□□□□ 0.85
CNN2-204ENST00000562075 DCAF11Q8TEB1 546 aa20.34■□□□□ 0.85
CNN2-204ENST00000562075 UHRF1BP1Q6BDS2 1440 aa20.34■□□□□ 0.85
CNN2-204ENST00000562075 KIF1BO60333 1816 aa20.33■□□□□ 0.85
CNN2-204ENST00000562075 ZNF326Q5BKZ1 582 aaKnown RBP20.33■□□□□ 0.85
CNN2-204ENST00000562075 ESF1Q9H501 851 aaKnown RBP20.33■□□□□ 0.85
CNN2-204ENST00000562075 KDM2AQ9Y2K7 1162 aa20.33■□□□□ 0.85
CNN2-204ENST00000562075 NEURL4Q96JN8 1562 aa20.33■□□□□ 0.84
CNN2-204ENST00000562075 PREX1Q8TCU6 1659 aa20.32■□□□□ 0.84
CNN2-204ENST00000562075 SYNMO15061 1565 aa20.32■□□□□ 0.84
CNN2-204ENST00000562075 PIK3C2BO00750 1634 aa20.28■□□□□ 0.84
CNN2-204ENST00000562075 ERVK-7P63135 1459 aa20.28■□□□□ 0.84
CNN2-204ENST00000562075 MROH2AA6NES4 1674 aa20.28■□□□□ 0.84
CNN2-204ENST00000562075 ADGRB3O60242 1522 aa20.27■□□□□ 0.84
CNN2-204ENST00000562075 RALGAPBQ86X10 1494 aa20.26■□□□□ 0.83
CNN2-204ENST00000562075 PRAG1Q86YV5 1406 aa20.26■□□□□ 0.83
CNN2-204ENST00000562075 CHGAP10645 457 aaKnown RBP20.24■□□□□ 0.83
CNN2-204ENST00000562075 FBXO31Q5XUX0 539 aaPredicted RBP20.23■□□□□ 0.83
CNN2-204ENST00000562075 SPATA31D1Q6ZQQ2 1576 aa20.23■□□□□ 0.83
CNN2-204ENST00000562075 STAC3Q96MF2 364 aa20.23■□□□□ 0.83
CNN2-204ENST00000562075 SLC52A1Q9NWF4 448 aa20.23■□□□□ 0.83
CNN2-204ENST00000562075 ZMYM3Q14202 1370 aa20.22■□□□□ 0.83
CNN2-204ENST00000562075 TRPM1Q7Z4N2 1603 aa20.21■□□□□ 0.83
CNN2-204ENST00000562075 EIF4G2P78344 907 aaKnown RBP eCLIP20.21■□□□□ 0.836e-8■■■□□ 18.5
CNN2-204ENST00000562075 IFT172Q9UG01 1749 aa20.21■□□□□ 0.83
CNN2-204ENST00000562075 MADDQ8WXG6 1647 aa20.2■□□□□ 0.82
CNN2-204ENST00000562075 FER1L4A9Z1Z3 1794 aa20.2■□□□□ 0.82
CNN2-204ENST00000562075 MYOM2P54296 1465 aa20.19■□□□□ 0.82
CNN2-204ENST00000562075 HSPA5P11021 654 aaKnown RBP20.19■□□□□ 0.82
CNN2-204ENST00000562075 IDI1Q13907 227 aa20.19■□□□□ 0.82
CNN2-204ENST00000562075 HIRIP3Q9BW71 556 aaPredicted RBP20.17■□□□□ 0.82
CNN2-204ENST00000562075 ROCK2O75116 1388 aaKnown RBP20.17■□□□□ 0.82
CNN2-204ENST00000562075 RPGRIP1LQ68CZ1 1315 aa20.16■□□□□ 0.82
CNN2-204ENST00000562075 TMEM131LA2VDJ0 1609 aa20.16■□□□□ 0.82
CNN2-204ENST00000562075 PPLO60437 1756 aa20.16■□□□□ 0.82
CNN2-204ENST00000562075 DIEXFQ68CQ4 756 aaKnown RBP20.15■□□□□ 0.82
CNN2-204ENST00000562075 CARD11Q9BXL7 1154 aa20.15■□□□□ 0.82
CNN2-204ENST00000562075 USP47Q96K76 1375 aa20.14■□□□□ 0.81
CNN2-204ENST00000562075 LAMC1P11047 1609 aa20.13■□□□□ 0.81
CNN2-204ENST00000562075 TNRQ92752 1358 aa20.13■□□□□ 0.81
CNN2-204ENST00000562075 MYO5BQ9ULV0 1848 aa20.12■□□□□ 0.81
CNN2-204ENST00000562075 C3P01024 1663 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms