RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
TCF4-211ENST00000561992 DDRGK1Q96HY6 314 aa13.16□□□□□ -0.3
TCF4-211ENST00000561992 ANKRD30AQ9BXX3 1397 aa13.16□□□□□ -0.3
TCF4-211ENST00000561992 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
TCF4-211ENST00000561992 KIAA0586Q9BVV6 1533 aa13.16□□□□□ -0.3
TCF4-211ENST00000561992 PLEKHH2Q8IVE3 1493 aa13.15□□□□□ -0.3
TCF4-211ENST00000561992 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
TCF4-211ENST00000561992 BACH2Q9BYV9 841 aa13.14□□□□□ -0.31
TCF4-211ENST00000561992 RCAN3Q9UKA8 241 aa13.14□□□□□ -0.31
TCF4-211ENST00000561992 PDE4AP27815 886 aa13.13□□□□□ -0.31
TCF4-211ENST00000561992 DISP1Q96F81 1524 aa13.13□□□□□ -0.31
TCF4-211ENST00000561992 TMEM132AQ24JP5 1023 aa13.12□□□□□ -0.31
TCF4-211ENST00000561992 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
TCF4-211ENST00000561992 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
TCF4-211ENST00000561992 GPATCH8Q9UKJ3 1502 aaKnown RBP13.11□□□□□ -0.31
TCF4-211ENST00000561992 CEP170Q5SW79 1584 aa13.11□□□□□ -0.31
TCF4-211ENST00000561992 ANKRD50Q9ULJ7 1429 aa13.1□□□□□ -0.31
TCF4-211ENST00000561992 PKD2Q13563 968 aa13.1□□□□□ -0.31
TCF4-211ENST00000561992 CARD11Q9BXL7 1154 aa13.1□□□□□ -0.31
TCF4-211ENST00000561992 PTPRGP23470 1445 aa13.09□□□□□ -0.31
TCF4-211ENST00000561992 LAMC1P11047 1609 aa13.09□□□□□ -0.31
TCF4-211ENST00000561992 CFDP1Q9UEE9 299 aaPredicted RBP13.08□□□□□ -0.31
TCF4-211ENST00000561992 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.31
TCF4-211ENST00000561992 NPM3O75607 178 aaKnown RBP13.08□□□□□ -0.32
TCF4-211ENST00000561992 EXOC6Q8TAG9 804 aa13.08□□□□□ -0.32
TCF4-211ENST00000561992 BLMP54132 1417 aaPredicted RBP13.08□□□□□ -0.32
TCF4-211ENST00000561992 ZNF644Q9H582 1327 aaPredicted RBP13.08□□□□□ -0.32
TCF4-211ENST00000561992 VSIG10Q8N0Z9 540 aa13.07□□□□□ -0.32
TCF4-211ENST00000561992 NEFMP07197 916 aa13.07□□□□□ -0.32
TCF4-211ENST00000561992 IFT140Q96RY7 1462 aa13.04□□□□□ -0.32
TCF4-211ENST00000561992 GPRASP1Q5JY77 1395 aa13.04□□□□□ -0.32
TCF4-211ENST00000561992 POLR3GLQ9BT43 218 aa13.04□□□□□ -0.32
TCF4-211ENST00000561992 ARHGEF5Q12774 1597 aa13.03□□□□□ -0.32
TCF4-211ENST00000561992 MRC2Q9UBG0 1479 aa13.03□□□□□ -0.32
TCF4-211ENST00000561992 ST20-MTHFSA0A0A6YYL1 179 aa13.03□□□□□ -0.32
TCF4-211ENST00000561992 NPM2Q86SE8 214 aaKnown RBP13.03□□□□□ -0.32
TCF4-211ENST00000561992 NUP155O75694 1391 aa13.02□□□□□ -0.32
TCF4-211ENST00000561992 PRG4Q92954 1404 aaPredicted RBP13.02□□□□□ -0.32
TCF4-211ENST00000561992 TRPM1Q7Z4N2 1603 aa13.02□□□□□ -0.32
TCF4-211ENST00000561992 ZNF326Q5BKZ1 582 aaKnown RBP13.02□□□□□ -0.33
TCF4-211ENST00000561992 C9orf84Q5VXU9 1444 aa13.02□□□□□ -0.33
TCF4-211ENST00000561992 EIF4G3O43432 1585 aaKnown RBP13.01□□□□□ -0.33
TCF4-211ENST00000561992 COL17A1Q9UMD9 1497 aaPredicted RBP13.01□□□□□ -0.33
TCF4-211ENST00000561992 GRIN2AQ12879 1464 aa13□□□□□ -0.33
TCF4-211ENST00000561992 PRAG1Q86YV5 1406 aa13□□□□□ -0.33
TCF4-211ENST00000561992 CDC42BPAQ5VT25 1732 aa13□□□□□ -0.33
TCF4-211ENST00000561992 EIF2AK4Q9P2K8 1649 aaKnown RBP13□□□□□ -0.33
TCF4-211ENST00000561992 NUP160Q12769 1436 aa12.99□□□□□ -0.33
TCF4-211ENST00000561992 PER1O15534 1290 aaPredicted RBP12.99□□□□□ -0.33
TCF4-211ENST00000561992 CENPQQ7L2Z9 268 aaPredicted RBP12.99□□□□□ -0.33
TCF4-211ENST00000561992 GSE1Q14687 1217 aa12.98□□□□□ -0.33
TCF4-211ENST00000561992 C14orf37Q86TY3 774 aa12.98□□□□□ -0.33
TCF4-211ENST00000561992 ABCC10Q5T3U5 1492 aa12.98□□□□□ -0.33
TCF4-211ENST00000561992 FBLN2P98095 1184 aa12.98□□□□□ -0.33
TCF4-211ENST00000561992 PRDM15P57071 1507 aaPredicted RBP12.98□□□□□ -0.33
TCF4-211ENST00000561992 ZNF608Q9ULD9 1512 aaPredicted RBP12.98□□□□□ -0.33
TCF4-211ENST00000561992 KDM2BQ8NHM5 1336 aa12.97□□□□□ -0.33
TCF4-211ENST00000561992 CLASP1Q7Z460 1538 aa12.97□□□□□ -0.33
TCF4-211ENST00000561992 CARMIL2Q6F5E8 1435 aa12.97□□□□□ -0.33
TCF4-211ENST00000561992 EIF5BO60841 1220 aaKnown RBP12.96□□□□□ -0.33
TCF4-211ENST00000561992 RSPH4AQ5TD94 716 aa12.96□□□□□ -0.33
TCF4-211ENST00000561992 LAS1LQ9Y4W2 734 aaKnown RBP12.96□□□□□ -0.33
TCF4-211ENST00000561992 EIF3AQ14152 1382 aaKnown RBP12.96□□□□□ -0.33
TCF4-211ENST00000561992 TSPY4P0CV99 314 aa12.96□□□□□ -0.34
TCF4-211ENST00000561992 TSPY10P0CW01 314 aa12.96□□□□□ -0.34
TCF4-211ENST00000561992 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.96□□□□□ -0.34
TCF4-211ENST00000561992 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
TCF4-211ENST00000561992 DCAF11Q8TEB1 546 aa12.95□□□□□ -0.34
TCF4-211ENST00000561992 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
TCF4-211ENST00000561992 FAM135AQ9P2D6 1515 aa12.94□□□□□ -0.34
TCF4-211ENST00000561992 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
TCF4-211ENST00000561992 FAM161AQ3B820 660 aa12.94□□□□□ -0.34
TCF4-211ENST00000561992 CRBNQ96SW2 442 aa12.94□□□□□ -0.34
TCF4-211ENST00000561992 SYNJ2O15056 1496 aa12.94□□□□□ -0.34
TCF4-211ENST00000561992 CCDC144AA2RUR9 1427 aa12.93□□□□□ -0.34
TCF4-211ENST00000561992 UNC13BO14795 1591 aa12.93□□□□□ -0.34
TCF4-211ENST00000561992 CCDC141Q6ZP82 1450 aa12.92□□□□□ -0.34
TCF4-211ENST00000561992 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
TCF4-211ENST00000561992 NFKBIBQ15653 356 aa12.92□□□□□ -0.34
TCF4-211ENST00000561992 ANO8Q9HCE9 1232 aaPredicted RBP12.92□□□□□ -0.34
TCF4-211ENST00000561992 ERBINQ96RT1 1412 aa12.92□□□□□ -0.34
TCF4-211ENST00000561992 ABCA8O94911 1581 aa12.92□□□□□ -0.34
TCF4-211ENST00000561992 MAST1Q9Y2H9 1570 aa12.92□□□□□ -0.34
TCF4-211ENST00000561992 ATP10AO60312 1499 aa12.92□□□□□ -0.34
TCF4-211ENST00000561992 PLB1Q6P1J6 1458 aa12.92□□□□□ -0.34
TCF4-211ENST00000561992 PLEKHD1A6NEE1 506 aa12.91□□□□□ -0.34
TCF4-211ENST00000561992 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.34
TCF4-211ENST00000561992 ZNF777Q9ULD5 760 aaPredicted RBP12.9□□□□□ -0.34
TCF4-211ENST00000561992 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
TCF4-211ENST00000561992 TMF1P82094 1093 aa12.9□□□□□ -0.34
TCF4-211ENST00000561992 NGEFQ8N5V2 710 aa12.9□□□□□ -0.34
TCF4-211ENST00000561992 TESK2Q96S53 571 aa12.88□□□□□ -0.35
TCF4-211ENST00000561992 RNF17Q9BXT8 1623 aaKnown RBP12.88□□□□□ -0.35
TCF4-211ENST00000561992 A2MP01023 1474 aa12.88□□□□□ -0.35
TCF4-211ENST00000561992 ZNF521Q96K83 1311 aa12.87□□□□□ -0.35
TCF4-211ENST00000561992 NPC1L1Q9UHC9 1359 aa12.87□□□□□ -0.35
TCF4-211ENST00000561992 NINLQ9Y2I6 1382 aa12.87□□□□□ -0.35
TCF4-211ENST00000561992 PIK3C2GO75747 1445 aa12.87□□□□□ -0.35
TCF4-211ENST00000561992 IQGAP3Q86VI3 1631 aa12.86□□□□□ -0.35
TCF4-211ENST00000561992 STAC3Q96MF2 364 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms