RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 NUTM2FA1L443 756 aa11.29□□□□□ -0.6
USP8-218ENST00000561330 C6orf132Q5T0Z8 1188 aa11.29□□□□□ -0.6
USP8-218ENST00000561330 KCNH8Q96L42 1107 aa11.29□□□□□ -0.6
USP8-218ENST00000561330 PTPREP23469 700 aa11.28□□□□□ -0.6
USP8-218ENST00000561330 TSR1Q2NL82 804 aaKnown RBP11.28□□□□□ -0.6
USP8-218ENST00000561330 PBX2P40425 430 aa11.27□□□□□ -0.61
USP8-218ENST00000561330 KCNK17Q96T54 332 aa11.27□□□□□ -0.61
USP8-218ENST00000561330 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
USP8-218ENST00000561330 ARHGAP33O14559 1287 aa11.26□□□□□ -0.61
USP8-218ENST00000561330 GPIHBP1Q8IV16 184 aa11.25□□□□□ -0.61
USP8-218ENST00000561330 AXIN2Q9Y2T1 843 aa11.24□□□□□ -0.61
USP8-218ENST00000561330 CDHR5Q9HBB8 845 aa11.23□□□□□ -0.61
USP8-218ENST00000561330 PSEN2P49810 448 aa11.22□□□□□ -0.61
USP8-218ENST00000561330 POTEEQ6S8J3 1075 aa11.22□□□□□ -0.61
USP8-218ENST00000561330 CERKQ8TCT0 537 aa11.22□□□□□ -0.61
USP8-218ENST00000561330 PPP1R3GB7ZBB8 358 aa11.21□□□□□ -0.61
USP8-218ENST00000561330 FCHSD2O94868 740 aa11.21□□□□□ -0.61
USP8-218ENST00000561330 COL9A1P20849 921 aa11.2□□□□□ -0.62
USP8-218ENST00000561330 PTGDRQ13258 359 aa11.2□□□□□ -0.62
USP8-218ENST00000561330 NPDC1Q9NQX5 325 aaPredicted RBP11.19□□□□□ -0.62
USP8-218ENST00000561330 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
USP8-218ENST00000561330 GPR37O15354 613 aa11.16□□□□□ -0.62
USP8-218ENST00000561330 HIC1Q14526 733 aa11.16□□□□□ -0.62
USP8-218ENST00000561330 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
USP8-218ENST00000561330 ZC3H15Q8WU90 426 aaKnown RBP11.16□□□□□ -0.62
USP8-218ENST00000561330 PRSS12P56730 875 aa11.15□□□□□ -0.62
USP8-218ENST00000561330 LSM11P83369 360 aaKnown RBP eCLIP11.15□□□□□ -0.62
USP8-218ENST00000561330 GNPATO15228 680 aa11.14□□□□□ -0.63
USP8-218ENST00000561330 CDCA7LQ96GN5 454 aa11.14□□□□□ -0.63
USP8-218ENST00000561330 ZBED2Q9BTP6 218 aa11.14□□□□□ -0.63
USP8-218ENST00000561330 SLC4A5Q9BY07 1137 aa11.13□□□□□ -0.63
USP8-218ENST00000561330 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
USP8-218ENST00000561330 KRTAP3-2Q9BYR7 98 aa11.13□□□□□ -0.63
USP8-218ENST00000561330 ANKRD13DQ6ZTN6 518 aa11.12□□□□□ -0.63
USP8-218ENST00000561330 RBM27Q9P2N5 1060 aaKnown RBP11.12□□□□□ -0.63
USP8-218ENST00000561330 TK2O00142 265 aa11.11□□□□□ -0.63
USP8-218ENST00000561330 PROX2Q3B8N5 592 aa11.11□□□□□ -0.63
USP8-218ENST00000561330 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
USP8-218ENST00000561330 ONECUT3O60422 494 aaPredicted RBP11.1□□□□□ -0.63
USP8-218ENST00000561330 ZMYND10O75800 440 aa11.1□□□□□ -0.63
USP8-218ENST00000561330 PADI6Q6TGC4 694 aa11.1□□□□□ -0.63
USP8-218ENST00000561330 VPS9D1Q9Y2B5 631 aa11.1□□□□□ -0.63
USP8-218ENST00000561330 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
USP8-218ENST00000561330 ADGRD1Q6QNK2 874 aa11.08□□□□□ -0.64
USP8-218ENST00000561330 PACS2Q86VP3 889 aa11.08□□□□□ -0.64
USP8-218ENST00000561330 TSKSQ9UJT2 592 aa11.08□□□□□ -0.64
USP8-218ENST00000561330 FECHP22830 423 aa11.07□□□□□ -0.64
USP8-218ENST00000561330 BARGINQ6ZT62 677 aa11.07□□□□□ -0.64
USP8-218ENST00000561330 TTC13Q8NBP0 860 aa11.07□□□□□ -0.64
USP8-218ENST00000561330 KIAA1468Q9P260 1216 aa11.07□□□□□ -0.64
USP8-218ENST00000561330 KRI1Q8N9T8 703 aaKnown RBP11.06□□□□□ -0.64
USP8-218ENST00000561330 FAM198AQ9UFP1 575 aa11.06□□□□□ -0.64
USP8-218ENST00000561330 RABGEF1Q9UJ41 708 aa11.06□□□□□ -0.64
USP8-218ENST00000561330 MAP2K5Q13163 448 aa11.04□□□□□ -0.64
USP8-218ENST00000561330 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
USP8-218ENST00000561330 NBPF3Q9H094 633 aa11.03□□□□□ -0.64
USP8-218ENST00000561330 MINK1Q8N4C8 1332 aaPredicted RBP11.03□□□□□ -0.64
USP8-218ENST00000561330 STAC3Q96MF2 364 aa11.02□□□□□ -0.65
USP8-218ENST00000561330 IRF6O14896 467 aa11.01□□□□□ -0.65
USP8-218ENST00000561330 TATDN2Q93075 761 aa11.01□□□□□ -0.65
USP8-218ENST00000561330 PNMA3Q9UL41 463 aa11.01□□□□□ -0.65
USP8-218ENST00000561330 ADGRG1Q9Y653 693 aa11.01□□□□□ -0.65
USP8-218ENST00000561330 HRO43593 1189 aa11□□□□□ -0.65
USP8-218ENST00000561330 OATP04181 439 aa11□□□□□ -0.65
USP8-218ENST00000561330 FAM161AQ3B820 660 aa11□□□□□ -0.65
USP8-218ENST00000561330 NUDT18Q6ZVK8 323 aa11□□□□□ -0.65
USP8-218ENST00000561330 RBM46Q8TBY0 533 aaKnown RBP11□□□□□ -0.65
USP8-218ENST00000561330 BHMG1C9JSJ3 638 aaPredicted RBP10.99□□□□□ -0.65
USP8-218ENST00000561330 SMAPO00193 183 aa10.98□□□□□ -0.65
USP8-218ENST00000561330 PRKCSHP14314 528 aaPredicted RBP10.98□□□□□ -0.65
USP8-218ENST00000561330 MRPL50Q8N5N7 158 aaKnown RBP10.98□□□□□ -0.65
USP8-218ENST00000561330 SEPT9Q9UHD8 586 aaPredicted RBP10.98□□□□□ -0.65
USP8-218ENST00000561330 C3orf80F5H4A9 247 aa10.97□□□□□ -0.65
USP8-218ENST00000561330 CCDC102AQ96A19 550 aa10.97□□□□□ -0.65
USP8-218ENST00000561330 LAPTM4BQ86VI4 370 aa10.96□□□□□ -0.65
USP8-218ENST00000561330 AK7Q96M32 723 aa10.96□□□□□ -0.65
USP8-218ENST00000561330 EYA1Q99502 592 aa10.96□□□□□ -0.65
USP8-218ENST00000561330 SLC24A3Q9HC58 644 aa10.96□□□□□ -0.65
USP8-218ENST00000561330 FAM98CQ17RN3 349 aaKnown RBP10.95□□□□□ -0.66
USP8-218ENST00000561330 METTL3Q86U44 580 aaKnown RBP10.94□□□□□ -0.66
USP8-218ENST00000561330 PXYLP1Q8TE99 480 aa10.94□□□□□ -0.66
USP8-218ENST00000561330 GOLGA8CPA6NN73 597 aa10.93□□□□□ -0.66
USP8-218ENST00000561330 RCCD1A6NED2 376 aa10.91□□□□□ -0.66
USP8-218ENST00000561330 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.9□□□□□ -0.66
USP8-218ENST00000561330 DNAJB2P25686 324 aa10.9□□□□□ -0.66
USP8-218ENST00000561330 ZFRQ96KR1 1074 aaKnown RBP10.9□□□□□ -0.66
USP8-218ENST00000561330 HDGFP51858 240 aaKnown RBP10.89□□□□□ -0.67
USP8-218ENST00000561330 SPNS2Q8IVW8 549 aa10.89□□□□□ -0.67
USP8-218ENST00000561330 PHOX2BQ99453 314 aa10.89□□□□□ -0.67
USP8-218ENST00000561330 TRIM66O15016 1216 aa10.88□□□□□ -0.67
USP8-218ENST00000561330 ANKK1Q8NFD2 765 aa10.87□□□□□ -0.67
USP8-218ENST00000561330 MYT1LQ9UL68 1186 aa10.87□□□□□ -0.67
USP8-218ENST00000561330 NLRP7Q8WX94 980 aa10.86□□□□□ -0.67
USP8-218ENST00000561330 TMEM134Q9H6X4 195 aa10.86□□□□□ -0.67
USP8-218ENST00000561330 WNT2BQ93097 391 aa10.85□□□□□ -0.67
USP8-218ENST00000561330 MDM2Q00987 491 aaPredicted RBP10.84□□□□□ -0.67
USP8-218ENST00000561330 AMHR2Q16671 573 aa10.84□□□□□ -0.67
USP8-218ENST00000561330 SWT1Q5T5J6 900 aaKnown RBP10.84□□□□□ -0.67
USP8-218ENST00000561330 SAMD7Q7Z3H4 446 aa10.84□□□□□ -0.67
USP8-218ENST00000561330 LRCH3Q96II8 777 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms