RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 CEP170BQ9Y4F5 1589 aaPredicted RBP29.13■■■□□ 2.25
TPM1-224ENST00000560615 MYO3AQ8NEV4 1616 aa29.13■■■□□ 2.25
TPM1-224ENST00000560615 MIA2Q96PC5 1412 aa29.11■■■□□ 2.25
TPM1-224ENST00000560615 KDM5DQ9BY66 1539 aa29.11■■■□□ 2.25
TPM1-224ENST00000560615 ZNF142P52746 1687 aaPredicted RBP29.11■■■□□ 2.25
TPM1-224ENST00000560615 IQSEC2Q5JU85 1478 aa29.1■■■□□ 2.25
TPM1-224ENST00000560615 KANK4Q5T7N3 995 aaPredicted RBP29.1■■■□□ 2.25
TPM1-224ENST00000560615 TNRQ92752 1358 aa29.1■■■□□ 2.25
TPM1-224ENST00000560615 A2ML1A8K2U0 1454 aa29.1■■■□□ 2.25
TPM1-224ENST00000560615 PZPP20742 1482 aa29.07■■■□□ 2.24
TPM1-224ENST00000560615 MYOM3Q5VTT5 1437 aa29.07■■■□□ 2.24
TPM1-224ENST00000560615 LTBP4Q8N2S1 1624 aa29.06■■■□□ 2.24
TPM1-224ENST00000560615 FBXO31Q5XUX0 539 aaPredicted RBP29.06■■■□□ 2.24
TPM1-224ENST00000560615 TCOF1Q13428 1488 aaKnown RBP29.05■■■□□ 2.24
TPM1-224ENST00000560615 THEMISQ8N1K5 641 aaPredicted RBP29.02■■■□□ 2.24
TPM1-224ENST00000560615 ZNF335Q9H4Z2 1342 aaPredicted RBP29.01■■■□□ 2.23
TPM1-224ENST00000560615 MAST1Q9Y2H9 1570 aa29.01■■■□□ 2.23
TPM1-224ENST00000560615 ANKLE2Q86XL3 938 aa28.98■■■□□ 2.23
TPM1-224ENST00000560615 DNMT1P26358 1616 aaKnown RBP28.98■■■□□ 2.23
TPM1-224ENST00000560615 NLRP1Q9C000 1473 aa28.97■■■□□ 2.23
TPM1-224ENST00000560615 UBAP1LF5GYI3 381 aa28.91■■■□□ 2.22
TPM1-224ENST00000560615 EIF2AK4Q9P2K8 1649 aaKnown RBP28.91■■■□□ 2.22
TPM1-224ENST00000560615 DUOX2Q9NRD8 1548 aa28.9■■■□□ 2.22
TPM1-224ENST00000560615 RNF17Q9BXT8 1623 aaKnown RBP28.9■■■□□ 2.22
TPM1-224ENST00000560615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.89■■■□□ 2.22
TPM1-224ENST00000560615 UGGT1Q9NYU2 1555 aa28.88■■■□□ 2.21
TPM1-224ENST00000560615 ZC3H13Q5T200 1668 aaKnown RBP28.87■■■□□ 2.21
TPM1-224ENST00000560615 ABCC3O15438 1527 aa28.87■■■□□ 2.21
TPM1-224ENST00000560615 KIF15Q9NS87 1388 aa28.86■■■□□ 2.21
TPM1-224ENST00000560615 DISP3Q9P2K9 1392 aa28.86■■■□□ 2.21
TPM1-224ENST00000560615 SHANK2Q9UPX8 1470 aa28.85■■■□□ 2.21
TPM1-224ENST00000560615 RRP7BPQ9NSQ0 103 aa28.85■■■□□ 2.21
TPM1-224ENST00000560615 ABCC5O15440 1437 aa28.83■■■□□ 2.21
TPM1-224ENST00000560615 ERBINQ96RT1 1412 aa28.83■■■□□ 2.21
TPM1-224ENST00000560615 PTPN23Q9H3S7 1636 aa28.8■■■□□ 2.2
TPM1-224ENST00000560615 SPATA31D1Q6ZQQ2 1576 aa28.8■■■□□ 2.2
TPM1-224ENST00000560615 CPS1P31327 1500 aa28.8■■■□□ 2.2
TPM1-224ENST00000560615 KANK1Q14678 1352 aa28.8■■■□□ 2.2
TPM1-224ENST00000560615 ERVK-7P63135 1459 aa28.79■■■□□ 2.2
TPM1-224ENST00000560615 NPHP4O75161 1426 aaPredicted RBP28.79■■■□□ 2.2
TPM1-224ENST00000560615 FGD6Q6ZV73 1430 aa28.79■■■□□ 2.2
TPM1-224ENST00000560615 POLR1AO95602 1720 aaPredicted RBP28.79■■■□□ 2.2
TPM1-224ENST00000560615 DAPK1P53355 1430 aa28.78■■■□□ 2.2
TPM1-224ENST00000560615 ANKRD30AQ9BXX3 1397 aa28.78■■■□□ 2.2
TPM1-224ENST00000560615 TOM1O60784 492 aa28.78■■■□□ 2.2
TPM1-224ENST00000560615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.77■■■□□ 2.21e-6■■■□□ 19
TPM1-224ENST00000560615 MED14O60244 1454 aa28.77■■■□□ 2.2
TPM1-224ENST00000560615 NEURL4Q96JN8 1562 aa28.76■■■□□ 2.19
TPM1-224ENST00000560615 ARHGAP31Q2M1Z3 1444 aa28.75■■■□□ 2.19
TPM1-224ENST00000560615 DEPDC5O75140 1603 aa28.74■■■□□ 2.19
TPM1-224ENST00000560615 MROH1Q8NDA8 1641 aa28.73■■■□□ 2.19
TPM1-224ENST00000560615 CHIC2Q9UKJ5 165 aa28.72■■■□□ 2.19
TPM1-224ENST00000560615 SCAF1Q9H7N4 1312 aaKnown RBP28.7■■■□□ 2.19
TPM1-224ENST00000560615 PRDM15P57071 1507 aaPredicted RBP28.7■■■□□ 2.19
TPM1-224ENST00000560615 CROCC2H7BZ55 1655 aa28.7■■■□□ 2.18
TPM1-224ENST00000560615 STAG3Q9UJ98 1225 aa28.68■■■□□ 2.18
TPM1-224ENST00000560615 EID1Q9Y6B2 187 aa28.68■■■□□ 2.18
TPM1-224ENST00000560615 CEP152O94986 1710 aa28.66■■■□□ 2.18
TPM1-224ENST00000560615 FAM50AQ14320 339 aaKnown RBP28.66■■■□□ 2.18
TPM1-224ENST00000560615 PIP4K2BP78356 416 aa28.65■■■□□ 2.18
TPM1-224ENST00000560615 TXNDC2Q86VQ3 553 aa28.65■■■□□ 2.18
TPM1-224ENST00000560615 IQGAP1P46940 1657 aa28.63■■■□□ 2.17
TPM1-224ENST00000560615 VWDEQ8N2E2 1590 aa28.62■■■□□ 2.17
TPM1-224ENST00000560615 SCAF11Q99590 1463 aaKnown RBP28.62■■■□□ 2.17
TPM1-224ENST00000560615 ILDR2Q71H61 639 aa28.57■■■□□ 2.16
TPM1-224ENST00000560615 LMTK2Q8IWU2 1503 aa28.57■■■□□ 2.16
TPM1-224ENST00000560615 UBR1Q8IWV7 1749 aa28.57■■■□□ 2.16
TPM1-224ENST00000560615 SLIT1O75093 1534 aa28.56■■■□□ 2.16
TPM1-224ENST00000560615 ADGRL2O95490 1459 aa28.56■■■□□ 2.16
TPM1-224ENST00000560615 ARHGAP23Q9P227 1491 aa28.55■■■□□ 2.16
TPM1-224ENST00000560615 LTKP29376 864 aa28.55■■■□□ 2.16
TPM1-224ENST00000560615 HSPA1LP34931 641 aa28.54■■■□□ 2.16
TPM1-224ENST00000560615 CFAP65Q6ZU64 1925 aaKnown RBP28.53■■■□□ 2.16
TPM1-224ENST00000560615 TMEM2Q9UHN6 1383 aa28.52■■■□□ 2.16
TPM1-224ENST00000560615 SOCS7O14512 581 aa28.52■■■□□ 2.16
TPM1-224ENST00000560615 IDI1Q13907 227 aa28.52■■■□□ 2.16
TPM1-224ENST00000560615 SLC52A1Q9NWF4 448 aa28.52■■■□□ 2.16
TPM1-224ENST00000560615 ANKRD50Q9ULJ7 1429 aa28.51■■■□□ 2.15
TPM1-224ENST00000560615 LRRC7Q96NW7 1537 aa28.48■■■□□ 2.15
TPM1-224ENST00000560615 SYNMO15061 1565 aa28.47■■■□□ 2.15
TPM1-224ENST00000560615 EFCAB6Q5THR3 1501 aa28.47■■■□□ 2.15
TPM1-224ENST00000560615 PIK3C2BO00750 1634 aa28.45■■■□□ 2.14
TPM1-224ENST00000560615 NOS1P29475 1434 aa28.44■■■□□ 2.14
TPM1-224ENST00000560615 HDGFP51858 240 aaKnown RBP28.44■■■□□ 2.14
TPM1-224ENST00000560615 RPRD2Q5VT52 1461 aaKnown RBP28.44■■■□□ 2.14
TPM1-224ENST00000560615 KDM5AP29375 1690 aaKnown RBP28.42■■■□□ 2.14
TPM1-224ENST00000560615 BCANQ96GW7 911 aa28.41■■■□□ 2.14
TPM1-224ENST00000560615 KCNA6P17658 529 aa28.37■■■□□ 2.13
TPM1-224ENST00000560615 ROCK1Q13464 1354 aa28.37■■■□□ 2.13
TPM1-224ENST00000560615 STRCP1A6NGW2 1772 aa28.35■■■□□ 2.13
TPM1-224ENST00000560615 ADGRB3O60242 1522 aa28.34■■■□□ 2.13
TPM1-224ENST00000560615 SLC26A8Q96RN1 970 aa28.34■■■□□ 2.13
TPM1-224ENST00000560615 PPP1R15AO75807 674 aaPredicted RBP28.33■■■□□ 2.13
TPM1-224ENST00000560615 PHF23Q9BUL5 403 aaPredicted RBP28.32■■■□□ 2.12
TPM1-224ENST00000560615 PROSER2Q86WR7 435 aaPredicted RBP28.31■■■□□ 2.12
TPM1-224ENST00000560615 ALKQ9UM73 1620 aa28.3■■■□□ 2.12
TPM1-224ENST00000560615 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.29■■■□□ 2.12
TPM1-224ENST00000560615 SENP3Q9H4L4 574 aaPredicted RBP28.29■■■□□ 2.12
TPM1-224ENST00000560615 TET3O43151 1660 aa28.29■■■□□ 2.12
TPM1-224ENST00000560615 TMEM94Q12767 1356 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms