RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 YEATS2Q9ULM3 1422 aa14.14□□□□□ -0.15
HERC1-206ENST00000559996 ANKRD30AQ9BXX3 1397 aa14.13□□□□□ -0.15
HERC1-206ENST00000559996 PLXNC1O60486 1568 aa14.13□□□□□ -0.15
HERC1-206ENST00000559996 KDM6BO15054 1643 aa14.12□□□□□ -0.15
HERC1-206ENST00000559996 SETD5Q9C0A6 1442 aa14.12□□□□□ -0.15
HERC1-206ENST00000559996 MAGI2Q86UL8 1455 aa14.12□□□□□ -0.15
HERC1-206ENST00000559996 ADGBQ8N7X0 1667 aa14.11□□□□□ -0.15
HERC1-206ENST00000559996 HECW2Q9P2P5 1572 aa14.11□□□□□ -0.15
HERC1-206ENST00000559996 DHX29Q7Z478 1369 aaKnown RBP14.1□□□□□ -0.15
HERC1-206ENST00000559996 KIF15Q9NS87 1388 aa14.1□□□□□ -0.15
HERC1-206ENST00000559996 HRCP23327 699 aa14.1□□□□□ -0.15
HERC1-206ENST00000559996 ABCA6Q8N139 1617 aa14.1□□□□□ -0.15
HERC1-206ENST00000559996 DIP2CQ9Y2E4 1556 aa14.09□□□□□ -0.15
HERC1-206ENST00000559996 RAB3GAP2Q9H2M9 1393 aa14.09□□□□□ -0.15
HERC1-206ENST00000559996 GCC2Q8IWJ2 1684 aa14.07□□□□□ -0.16
HERC1-206ENST00000559996 ANKRD50Q9ULJ7 1429 aa14.07□□□□□ -0.16
HERC1-206ENST00000559996 DUOX2Q9NRD8 1548 aa14.07□□□□□ -0.16
HERC1-206ENST00000559996 ATP10AO60312 1499 aa14.06□□□□□ -0.16
HERC1-206ENST00000559996 SIGLEC1Q9BZZ2 1709 aa14.06□□□□□ -0.16
HERC1-206ENST00000559996 A2MP01023 1474 aa14.06□□□□□ -0.16
HERC1-206ENST00000559996 MYT1LQ9UL68 1186 aa14.05□□□□□ -0.16
HERC1-206ENST00000559996 ERBINQ96RT1 1412 aa14.04□□□□□ -0.16
HERC1-206ENST00000559996 REREQ9P2R6 1566 aa14.03□□□□□ -0.16
HERC1-206ENST00000559996 ARHGEF40Q8TER5 1519 aa14.02□□□□□ -0.16
HERC1-206ENST00000559996 KIF3BO15066 747 aa14□□□□□ -0.17
HERC1-206ENST00000559996 BCORL1Q5H9F3 1711 aa14□□□□□ -0.17
HERC1-206ENST00000559996 AGLP35573 1532 aa14□□□□□ -0.17
HERC1-206ENST00000559996 MROH1Q8NDA8 1641 aa13.98□□□□□ -0.17
HERC1-206ENST00000559996 EIF2AK4Q9P2K8 1649 aaKnown RBP13.98□□□□□ -0.17
HERC1-206ENST00000559996 ABCB7O75027 752 aa13.98□□□□□ -0.17
HERC1-206ENST00000559996 DEPDC5O75140 1603 aa13.97□□□□□ -0.17
HERC1-206ENST00000559996 VWDEQ8N2E2 1590 aa13.96□□□□□ -0.17
HERC1-206ENST00000559996 PZPP20742 1482 aa13.96□□□□□ -0.17
HERC1-206ENST00000559996 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
HERC1-206ENST00000559996 UNC13BO14795 1591 aa13.96□□□□□ -0.18
HERC1-206ENST00000559996 DHX57Q6P158 1386 aaKnown RBP13.96□□□□□ -0.18
HERC1-206ENST00000559996 RNF17Q9BXT8 1623 aaKnown RBP13.95□□□□□ -0.18
HERC1-206ENST00000559996 NUP155O75694 1391 aa13.95□□□□□ -0.18
HERC1-206ENST00000559996 KDM5DQ9BY66 1539 aa13.95□□□□□ -0.18
HERC1-206ENST00000559996 GGT6Q6P531 493 aa13.94□□□□□ -0.18
HERC1-206ENST00000559996 TRIM52Q96A61 297 aa13.93□□□□□ -0.18
HERC1-206ENST00000559996 MPHOSPH9Q99550 1183 aa13.93□□□□□ -0.18
HERC1-206ENST00000559996 ACIN1Q9UKV3 1341 aaKnown RBP13.92□□□□□ -0.18
HERC1-206ENST00000559996 PRDM15P57071 1507 aaPredicted RBP13.92□□□□□ -0.18
HERC1-206ENST00000559996 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.18
HERC1-206ENST00000559996 IQGAP3Q86VI3 1631 aa13.9□□□□□ -0.18
HERC1-206ENST00000559996 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
HERC1-206ENST00000559996 LMTK2Q8IWU2 1503 aa13.89□□□□□ -0.19
HERC1-206ENST00000559996 MLECQ14165 292 aa13.88□□□□□ -0.19
HERC1-206ENST00000559996 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
HERC1-206ENST00000559996 ABCC3O15438 1527 aa13.87□□□□□ -0.19
HERC1-206ENST00000559996 PKD2Q13563 968 aa13.87□□□□□ -0.19
HERC1-206ENST00000559996 ARID4BQ4LE39 1312 aaPredicted RBP13.87□□□□□ -0.19
HERC1-206ENST00000559996 WASHC2CQ9Y4E1 1318 aa13.86□□□□□ -0.19
HERC1-206ENST00000559996 PLA2R1Q13018 1463 aa13.85□□□□□ -0.19
HERC1-206ENST00000559996 KANK1Q14678 1352 aa13.84□□□□□ -0.19
HERC1-206ENST00000559996 ANKRD30BQ9BXX2 1392 aa13.84□□□□□ -0.19
HERC1-206ENST00000559996 CEP152O94986 1710 aa13.84□□□□□ -0.19
HERC1-206ENST00000559996 E9PCH4 1651 aa13.83□□□□□ -0.2
HERC1-206ENST00000559996 TET3O43151 1660 aa13.83□□□□□ -0.2
HERC1-206ENST00000559996 NPATQ14207 1427 aa13.82□□□□□ -0.2
HERC1-206ENST00000559996 ARHGAP31Q2M1Z3 1444 aa13.82□□□□□ -0.2
HERC1-206ENST00000559996 ADAMTSL3P82987 1691 aa13.82□□□□□ -0.2
HERC1-206ENST00000559996 ZMYM3Q14202 1370 aa13.81□□□□□ -0.2
HERC1-206ENST00000559996 PTPRTO14522 1441 aa13.81□□□□□ -0.2
HERC1-206ENST00000559996 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
HERC1-206ENST00000559996 CLTCQ00610 1675 aaKnown RBP13.8□□□□□ -0.2
HERC1-206ENST00000559996 ZC3H13Q5T200 1668 aaKnown RBP13.8□□□□□ -0.2
HERC1-206ENST00000559996 CAMSAP1Q5T5Y3 1602 aa13.79□□□□□ -0.2
HERC1-206ENST00000559996 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
HERC1-206ENST00000559996 CCER1Q8TC90 406 aaPredicted RBP13.79□□□□□ -0.2
HERC1-206ENST00000559996 SIN3AQ96ST3 1273 aa13.79□□□□□ -0.2
HERC1-206ENST00000559996 CLSPNQ9HAW4 1339 aa13.78□□□□□ -0.2
HERC1-206ENST00000559996 NOS1P29475 1434 aa13.78□□□□□ -0.2
HERC1-206ENST00000559996 KDM4FA0A1W2PPD8 638 aa13.77□□□□□ -0.21
HERC1-206ENST00000559996 CEBPAP49715 358 aaPredicted RBP13.77□□□□□ -0.21
HERC1-206ENST00000559996 RPRD2Q5VT52 1461 aaKnown RBP13.77□□□□□ -0.21
HERC1-206ENST00000559996 CNTLNQ9NXG0 1405 aa13.77□□□□□ -0.21
HERC1-206ENST00000559996 CFAP65Q6ZU64 1925 aaKnown RBP13.76□□□□□ -0.21
HERC1-206ENST00000559996 MADDQ8WXG6 1647 aa13.76□□□□□ -0.21
HERC1-206ENST00000559996 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
HERC1-206ENST00000559996 POTEHQ6S545 545 aa13.75□□□□□ -0.21
HERC1-206ENST00000559996 MROH2AA6NES4 1674 aa13.75□□□□□ -0.21
HERC1-206ENST00000559996 FER1L4A9Z1Z3 1794 aa13.74□□□□□ -0.21
HERC1-206ENST00000559996 ERVK-7P63135 1459 aa13.73□□□□□ -0.21
HERC1-206ENST00000559996 C3P01024 1663 aa13.72□□□□□ -0.21
HERC1-206ENST00000559996 SYNMO15061 1565 aa13.72□□□□□ -0.21
HERC1-206ENST00000559996 SPATA31D1Q6ZQQ2 1576 aa13.72□□□□□ -0.21
HERC1-206ENST00000559996 ESF1Q9H501 851 aaKnown RBP13.72□□□□□ -0.21
HERC1-206ENST00000559996 PREX1Q8TCU6 1659 aa13.72□□□□□ -0.21
HERC1-206ENST00000559996 TRPM2O94759 1503 aa13.71□□□□□ -0.21
HERC1-206ENST00000559996 SPHKAPQ2M3C7 1700 aa13.71□□□□□ -0.21
HERC1-206ENST00000559996 IDI1Q13907 227 aa13.71□□□□□ -0.21
HERC1-206ENST00000559996 RIMS1Q86UR5 1692 aaKnown RBP13.71□□□□□ -0.21
HERC1-206ENST00000559996 UGGT1Q9NYU2 1555 aa13.71□□□□□ -0.22
HERC1-206ENST00000559996 PIK3C2BO00750 1634 aa13.69□□□□□ -0.22
HERC1-206ENST00000559996 NEUROD1Q13562 356 aa13.69□□□□□ -0.22
HERC1-206ENST00000559996 CLTCL1P53675 1640 aa13.68□□□□□ -0.22
HERC1-206ENST00000559996 PTPRMP28827 1452 aa13.68□□□□□ -0.22
HERC1-206ENST00000559996 SPATA31E1Q6ZUB1 1445 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms