RNA–Protein interactions for RNA: ENST00000559948.5

PSMA4-216, Transcript of proteasome subunit alpha 4, humanhuman

TSL 5

Gene PSMA4, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-216ENST00000559948 PLA2R1Q13018 1463 aa14.01□□□□□ -0.17
PSMA4-216ENST00000559948 TCOF1Q13428 1488 aaKnown RBP14.01□□□□□ -0.17
PSMA4-216ENST00000559948 LRRC9Q6ZRR7 1453 aa14.01□□□□□ -0.17
PSMA4-216ENST00000559948 VPS8Q8N3P4 1428 aa14.01□□□□□ -0.17
PSMA4-216ENST00000559948 TSPY4P0CV99 314 aa14.01□□□□□ -0.17
PSMA4-216ENST00000559948 TSPY10P0CW01 314 aa14.01□□□□□ -0.17
PSMA4-216ENST00000559948 ZNF335Q9H4Z2 1342 aaPredicted RBP14□□□□□ -0.17
PSMA4-216ENST00000559948 WASHC2CQ9Y4E1 1318 aa13.99□□□□□ -0.17
PSMA4-216ENST00000559948 CEP170BQ9Y4F5 1589 aaPredicted RBP13.98□□□□□ -0.17
PSMA4-216ENST00000559948 MYO3AQ8NEV4 1616 aa13.97□□□□□ -0.17
PSMA4-216ENST00000559948 A2ML1A8K2U0 1454 aa13.97□□□□□ -0.17
PSMA4-216ENST00000559948 IQSEC2Q5JU85 1478 aa13.97□□□□□ -0.17
PSMA4-216ENST00000559948 ARHGEF5Q12774 1597 aa13.96□□□□□ -0.17
PSMA4-216ENST00000559948 MAP3K1Q13233 1512 aa13.96□□□□□ -0.17
PSMA4-216ENST00000559948 ZNF142P52746 1687 aaPredicted RBP13.96□□□□□ -0.17
PSMA4-216ENST00000559948 PZPP20742 1482 aa13.96□□□□□ -0.17
PSMA4-216ENST00000559948 TNRQ92752 1358 aa13.96□□□□□ -0.18
PSMA4-216ENST00000559948 DNMT1P26358 1616 aaKnown RBP13.95□□□□□ -0.18
PSMA4-216ENST00000559948 MIA2Q96PC5 1412 aa13.95□□□□□ -0.18
PSMA4-216ENST00000559948 KDM5DQ9BY66 1539 aa13.93□□□□□ -0.18
PSMA4-216ENST00000559948 FAM135AQ9P2D6 1515 aa13.93□□□□□ -0.18
PSMA4-216ENST00000559948 ILDR2Q71H61 639 aa13.92□□□□□ -0.18
PSMA4-216ENST00000559948 THEMISQ8N1K5 641 aaPredicted RBP13.92□□□□□ -0.18
PSMA4-216ENST00000559948 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
PSMA4-216ENST00000559948 ANKLE2Q86XL3 938 aa13.91□□□□□ -0.18
PSMA4-216ENST00000559948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.91□□□□□ -0.181e-6■■□□□ 12.1
PSMA4-216ENST00000559948 MAST1Q9Y2H9 1570 aa13.91□□□□□ -0.18
PSMA4-216ENST00000559948 DISP3Q9P2K9 1392 aa13.89□□□□□ -0.19
PSMA4-216ENST00000559948 UBAP1LF5GYI3 381 aa13.89□□□□□ -0.19
PSMA4-216ENST00000559948 NLRP1Q9C000 1473 aa13.88□□□□□ -0.19
PSMA4-216ENST00000559948 NEURL4Q96JN8 1562 aa13.88□□□□□ -0.19
PSMA4-216ENST00000559948 ABCC3O15438 1527 aa13.87□□□□□ -0.19
PSMA4-216ENST00000559948 ABCC5O15440 1437 aa13.87□□□□□ -0.19
PSMA4-216ENST00000559948 MED14O60244 1454 aa13.87□□□□□ -0.19
PSMA4-216ENST00000559948 RNF17Q9BXT8 1623 aaKnown RBP13.86□□□□□ -0.19
PSMA4-216ENST00000559948 UGGT1Q9NYU2 1555 aa13.85□□□□□ -0.19
PSMA4-216ENST00000559948 RRP7BPQ9NSQ0 103 aa13.85□□□□□ -0.19
PSMA4-216ENST00000559948 MROH1Q8NDA8 1641 aa13.85□□□□□ -0.19
PSMA4-216ENST00000559948 SHANK2Q9UPX8 1470 aa13.85□□□□□ -0.19
PSMA4-216ENST00000559948 SPATA31D1Q6ZQQ2 1576 aa13.83□□□□□ -0.19
PSMA4-216ENST00000559948 DUOX2Q9NRD8 1548 aa13.83□□□□□ -0.2
PSMA4-216ENST00000559948 NPHP4O75161 1426 aaPredicted RBP13.82□□□□□ -0.2
PSMA4-216ENST00000559948 ERVK-7P63135 1459 aa13.82□□□□□ -0.2
PSMA4-216ENST00000559948 EIF2AK4Q9P2K8 1649 aaKnown RBP13.82□□□□□ -0.2
PSMA4-216ENST00000559948 KIF15Q9NS87 1388 aa13.82□□□□□ -0.2
PSMA4-216ENST00000559948 ARHGAP31Q2M1Z3 1444 aa13.81□□□□□ -0.2
PSMA4-216ENST00000559948 VWDEQ8N2E2 1590 aa13.81□□□□□ -0.2
PSMA4-216ENST00000559948 LTKP29376 864 aa13.81□□□□□ -0.2
PSMA4-216ENST00000559948 APLP2Q06481 763 aa13.81□□□□□ -0.2
PSMA4-216ENST00000559948 CPS1P31327 1500 aa13.8□□□□□ -0.2
PSMA4-216ENST00000559948 SOCS7O14512 581 aa13.8□□□□□ -0.2
PSMA4-216ENST00000559948 DEPDC5O75140 1603 aa13.79□□□□□ -0.2
PSMA4-216ENST00000559948 TOM1O60784 492 aa13.79□□□□□ -0.2
PSMA4-216ENST00000559948 HSPA1LP34931 641 aa13.79□□□□□ -0.2
PSMA4-216ENST00000559948 DAPK1P53355 1430 aa13.79□□□□□ -0.2
PSMA4-216ENST00000559948 FGD6Q6ZV73 1430 aa13.79□□□□□ -0.2
PSMA4-216ENST00000559948 ERBINQ96RT1 1412 aa13.79□□□□□ -0.2
PSMA4-216ENST00000559948 ZC3H13Q5T200 1668 aaKnown RBP13.79□□□□□ -0.2
PSMA4-216ENST00000559948 POLR1AO95602 1720 aaPredicted RBP13.78□□□□□ -0.2
PSMA4-216ENST00000559948 PIP4K2BP78356 416 aa13.78□□□□□ -0.2
PSMA4-216ENST00000559948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.2
PSMA4-216ENST00000559948 CHIC2Q9UKJ5 165 aa13.78□□□□□ -0.2
PSMA4-216ENST00000559948 PTPN23Q9H3S7 1636 aa13.77□□□□□ -0.21
PSMA4-216ENST00000559948 ARHGAP23Q9P227 1491 aa13.76□□□□□ -0.21
PSMA4-216ENST00000559948 IDI1Q13907 227 aa13.76□□□□□ -0.21
PSMA4-216ENST00000559948 TXNDC2Q86VQ3 553 aa13.76□□□□□ -0.21
PSMA4-216ENST00000559948 ALKQ9UM73 1620 aa13.75□□□□□ -0.21
PSMA4-216ENST00000559948 PRDM15P57071 1507 aaPredicted RBP13.75□□□□□ -0.21
PSMA4-216ENST00000559948 ANKRD30AQ9BXX3 1397 aa13.74□□□□□ -0.21
PSMA4-216ENST00000559948 SLIT1O75093 1534 aa13.74□□□□□ -0.21
PSMA4-216ENST00000559948 LRRC7Q96NW7 1537 aa13.74□□□□□ -0.21
PSMA4-216ENST00000559948 CEP152O94986 1710 aa13.73□□□□□ -0.21
PSMA4-216ENST00000559948 UBR1Q8IWV7 1749 aa13.73□□□□□ -0.21
PSMA4-216ENST00000559948 IQGAP1P46940 1657 aa13.72□□□□□ -0.21
PSMA4-216ENST00000559948 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
PSMA4-216ENST00000559948 LMTK2Q8IWU2 1503 aa13.72□□□□□ -0.21
PSMA4-216ENST00000559948 SCAF11Q99590 1463 aaKnown RBP13.72□□□□□ -0.21
PSMA4-216ENST00000559948 TMEM2Q9UHN6 1383 aa13.71□□□□□ -0.21
PSMA4-216ENST00000559948 STRCP1A6NGW2 1772 aa13.71□□□□□ -0.21
PSMA4-216ENST00000559948 CROCC2H7BZ55 1655 aa13.71□□□□□ -0.21
PSMA4-216ENST00000559948 KANK1Q14678 1352 aa13.71□□□□□ -0.22
PSMA4-216ENST00000559948 EID1Q9Y6B2 187 aa13.7□□□□□ -0.22
PSMA4-216ENST00000559948 NOS1P29475 1434 aa13.7□□□□□ -0.22
PSMA4-216ENST00000559948 CFAP65Q6ZU64 1925 aaKnown RBP13.7□□□□□ -0.22
PSMA4-216ENST00000559948 ADGRL2O95490 1459 aa13.69□□□□□ -0.22
PSMA4-216ENST00000559948 FAM50AQ14320 339 aaKnown RBP13.68□□□□□ -0.22
PSMA4-216ENST00000559948 SLC52A1Q9NWF4 448 aa13.68□□□□□ -0.22
PSMA4-216ENST00000559948 MAPK8IP2Q13387 824 aaPredicted RBP13.67□□□□□ -0.22
PSMA4-216ENST00000559948 PPP4R3CPQ6ZMV5 832 aa13.67□□□□□ -0.22
PSMA4-216ENST00000559948 PIK3C2BO00750 1634 aa13.66□□□□□ -0.22
PSMA4-216ENST00000559948 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
PSMA4-216ENST00000559948 ANKRD50Q9ULJ7 1429 aa13.65□□□□□ -0.22
PSMA4-216ENST00000559948 KCNA6P17658 529 aa13.65□□□□□ -0.22
PSMA4-216ENST00000559948 SLC26A8Q96RN1 970 aa13.65□□□□□ -0.22
PSMA4-216ENST00000559948 SYNMO15061 1565 aa13.65□□□□□ -0.22
PSMA4-216ENST00000559948 TET3O43151 1660 aa13.65□□□□□ -0.22
PSMA4-216ENST00000559948 EFCAB6Q5THR3 1501 aa13.64□□□□□ -0.23
PSMA4-216ENST00000559948 KDM5AP29375 1690 aaKnown RBP13.62□□□□□ -0.23
PSMA4-216ENST00000559948 RBM33Q96EV2 1170 aaKnown RBP13.61□□□□□ -0.23
PSMA4-216ENST00000559948 MED1Q15648 1581 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms