RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 MYT1LQ9UL68 1186 aa18.13■□□□□ 0.49
USP3-213ENST00000559711 KIDINS220Q9ULH0 1771 aa18.11■□□□□ 0.49
USP3-213ENST00000559711 RAPGEF3O95398 923 aa18.09■□□□□ 0.49
USP3-213ENST00000559711 ATP10AO60312 1499 aa18.09■□□□□ 0.49
USP3-213ENST00000559711 PLA2R1Q13018 1463 aa18.09■□□□□ 0.49
USP3-213ENST00000559711 KIF3BO15066 747 aa18.09■□□□□ 0.49
USP3-213ENST00000559711 DEPDC5O75140 1603 aa18.08■□□□□ 0.49
USP3-213ENST00000559711 A2MP01023 1474 aa18.08■□□□□ 0.49
USP3-213ENST00000559711 EIF2AK4Q9P2K8 1649 aaKnown RBP18.08■□□□□ 0.48
USP3-213ENST00000559711 HECW2Q9P2P5 1572 aa18.07■□□□□ 0.48
USP3-213ENST00000559711 KANK1Q14678 1352 aa18.06■□□□□ 0.48
USP3-213ENST00000559711 VWDEQ8N2E2 1590 aa18.06■□□□□ 0.48
USP3-213ENST00000559711 NBPF8Q3BBV2 869 aa18.05■□□□□ 0.48
USP3-213ENST00000559711 CCDC144AA2RUR9 1427 aa18.04■□□□□ 0.48
USP3-213ENST00000559711 PRDM15P57071 1507 aaPredicted RBP18.03■□□□□ 0.48
USP3-213ENST00000559711 FRMPD1Q5SYB0 1578 aa18.02■□□□□ 0.47
USP3-213ENST00000559711 MROH1Q8NDA8 1641 aa18.01■□□□□ 0.47
USP3-213ENST00000559711 RICTORQ6R327 1708 aa18■□□□□ 0.47
USP3-213ENST00000559711 PTPRTO14522 1441 aa18■□□□□ 0.47
USP3-213ENST00000559711 UHRF1BP1Q6BDS2 1440 aa18■□□□□ 0.47
USP3-213ENST00000559711 ABCA6Q8N139 1617 aa17.99■□□□□ 0.47
USP3-213ENST00000559711 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
USP3-213ENST00000559711 LMTK2Q8IWU2 1503 aa17.98■□□□□ 0.47
USP3-213ENST00000559711 RNF17Q9BXT8 1623 aaKnown RBP17.98■□□□□ 0.47
USP3-213ENST00000559711 TET3O43151 1660 aa17.97■□□□□ 0.47
USP3-213ENST00000559711 DIP2CQ9Y2E4 1556 aa17.97■□□□□ 0.47
USP3-213ENST00000559711 ZMYM4Q5VZL5 1548 aa17.97■□□□□ 0.47
USP3-213ENST00000559711 EIF4G2P78344 907 aaKnown RBP eCLIP17.96■□□□□ 0.47
USP3-213ENST00000559711 BCORL1Q5H9F3 1711 aa17.96■□□□□ 0.47
USP3-213ENST00000559711 HIRIP3Q9BW71 556 aaPredicted RBP17.96■□□□□ 0.47
USP3-213ENST00000559711 YEATS2Q9ULM3 1422 aa17.95■□□□□ 0.46
USP3-213ENST00000559711 E9PCH4 1651 aa17.95■□□□□ 0.46
USP3-213ENST00000559711 HSPA5P11021 654 aaKnown RBP17.95■□□□□ 0.46
USP3-213ENST00000559711 TRPM2O94759 1503 aa17.93■□□□□ 0.46
USP3-213ENST00000559711 DCAF11Q8TEB1 546 aa17.93■□□□□ 0.46
USP3-213ENST00000559711 MIER1Q8N108 512 aa17.93■□□□□ 0.46
USP3-213ENST00000559711 GGT6Q6P531 493 aa17.92■□□□□ 0.46
USP3-213ENST00000559711 SPATA31E1Q6ZUB1 1445 aa17.91■□□□□ 0.46
USP3-213ENST00000559711 EFCAB6Q5THR3 1501 aa17.91■□□□□ 0.46
USP3-213ENST00000559711 KIF13AQ9H1H9 1805 aa17.91■□□□□ 0.46
USP3-213ENST00000559711 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
USP3-213ENST00000559711 KDM2AQ9Y2K7 1162 aa17.9■□□□□ 0.46
USP3-213ENST00000559711 AEBP2Q6ZN18 517 aaPredicted RBP17.9■□□□□ 0.46
USP3-213ENST00000559711 RALGAPBQ86X10 1494 aa17.89■□□□□ 0.45
USP3-213ENST00000559711 TSPOAP1O95153 1857 aa17.89■□□□□ 0.45
USP3-213ENST00000559711 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
USP3-213ENST00000559711 WASHC2CQ9Y4E1 1318 aa17.88■□□□□ 0.45
USP3-213ENST00000559711 PRAG1Q86YV5 1406 aa17.87■□□□□ 0.45
USP3-213ENST00000559711 COL17A1Q9UMD9 1497 aaPredicted RBP17.87■□□□□ 0.45
USP3-213ENST00000559711 DDX10Q13206 875 aaKnown RBP17.87■□□□□ 0.45
USP3-213ENST00000559711 STAC3Q96MF2 364 aa17.87■□□□□ 0.45
USP3-213ENST00000559711 ABCC3O15438 1527 aa17.86■□□□□ 0.45
USP3-213ENST00000559711 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
USP3-213ENST00000559711 REREQ9P2R6 1566 aa17.85■□□□□ 0.45
USP3-213ENST00000559711 NPATQ14207 1427 aa17.84■□□□□ 0.45
USP3-213ENST00000559711 NEURL4Q96JN8 1562 aa17.84■□□□□ 0.45
USP3-213ENST00000559711 CLTCL1P53675 1640 aa17.83■□□□□ 0.45
USP3-213ENST00000559711 ARHGAP31Q2M1Z3 1444 aa17.82■□□□□ 0.44
USP3-213ENST00000559711 AGLP35573 1532 aa17.82■□□□□ 0.44
USP3-213ENST00000559711 USP47Q96K76 1375 aa17.82■□□□□ 0.44
USP3-213ENST00000559711 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
USP3-213ENST00000559711 CEP152O94986 1710 aa17.81■□□□□ 0.44
USP3-213ENST00000559711 CARD11Q9BXL7 1154 aa17.81■□□□□ 0.44
USP3-213ENST00000559711 PPP6R1Q9UPN7 881 aa17.81■□□□□ 0.44
USP3-213ENST00000559711 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
USP3-213ENST00000559711 GPRASP1Q5JY77 1395 aa17.8■□□□□ 0.44
USP3-213ENST00000559711 NOS1P29475 1434 aa17.79■□□□□ 0.44
USP3-213ENST00000559711 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
USP3-213ENST00000559711 C11orf95C9JLR9 678 aaPredicted RBP17.78■□□□□ 0.44
USP3-213ENST00000559711 CCDC7Q96M83 1385 aa17.77■□□□□ 0.43
USP3-213ENST00000559711 ZC3H13Q5T200 1668 aaKnown RBP17.76■□□□□ 0.43
USP3-213ENST00000559711 UGGT1Q9NYU2 1555 aa17.76■□□□□ 0.43
USP3-213ENST00000559711 CAMSAP1Q5T5Y3 1602 aa17.76■□□□□ 0.43
USP3-213ENST00000559711 NBPF1Q3BBV0 1214 aa17.75■□□□□ 0.43
USP3-213ENST00000559711 TRPM1Q7Z4N2 1603 aa17.75■□□□□ 0.43
USP3-213ENST00000559711 ARHGEF40Q8TER5 1519 aa17.75■□□□□ 0.43
USP3-213ENST00000559711 ARID4BQ4LE39 1312 aaPredicted RBP17.73■□□□□ 0.43
USP3-213ENST00000559711 KIF7Q2M1P5 1343 aa17.73■□□□□ 0.43
USP3-213ENST00000559711 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
USP3-213ENST00000559711 ST20-MTHFSA0A0A6YYL1 179 aa17.71■□□□□ 0.42
USP3-213ENST00000559711 SLC52A1Q9NWF4 448 aa17.71■□□□□ 0.42
USP3-213ENST00000559711 ADGRB3O60242 1522 aa17.7■□□□□ 0.42
USP3-213ENST00000559711 LAMC1P11047 1609 aa17.7■□□□□ 0.42
USP3-213ENST00000559711 MYOM2P54296 1465 aa17.7■□□□□ 0.42
USP3-213ENST00000559711 MADDQ8WXG6 1647 aa17.7■□□□□ 0.42
USP3-213ENST00000559711 RPGRIP1LQ68CZ1 1315 aa17.69■□□□□ 0.42
USP3-213ENST00000559711 SYNMO15061 1565 aa17.68■□□□□ 0.42
USP3-213ENST00000559711 SIGLEC1Q9BZZ2 1709 aa17.67■□□□□ 0.42
USP3-213ENST00000559711 KIF1BO60333 1816 aa17.67■□□□□ 0.42
USP3-213ENST00000559711 ANP32CO43423 234 aa17.67■□□□□ 0.42
USP3-213ENST00000559711 NRXN1Q9ULB1 1477 aa17.67■□□□□ 0.42
USP3-213ENST00000559711 PIK3C2BO00750 1634 aa17.67■□□□□ 0.42
USP3-213ENST00000559711 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
USP3-213ENST00000559711 IDI1Q13907 227 aa17.66■□□□□ 0.42
USP3-213ENST00000559711 ADGRF5Q8IZF2 1346 aa17.65■□□□□ 0.42
USP3-213ENST00000559711 CHGAP10645 457 aaKnown RBP17.65■□□□□ 0.42
USP3-213ENST00000559711 MROH2AA6NES4 1674 aa17.63■□□□□ 0.41
USP3-213ENST00000559711 FBXO31Q5XUX0 539 aaPredicted RBP17.63■□□□□ 0.41
USP3-213ENST00000559711 ERVK-7P63135 1459 aa17.63■□□□□ 0.41
USP3-213ENST00000559711 MLECQ14165 292 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms