RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 ATP7AQ04656 1500 aa15.43■□□□□ 0.06
SPG11-217ENST00000559511 SUPT16HQ9Y5B9 1047 aaKnown RBP15.41■□□□□ 0.06
SPG11-217ENST00000559511 SCAPERQ9BY12 1400 aa15.41■□□□□ 0.06
SPG11-217ENST00000559511 KDM5CP41229 1560 aa15.41■□□□□ 0.06
SPG11-217ENST00000559511 CFAP74Q9C0B2 1584 aa15.41■□□□□ 0.06
SPG11-217ENST00000559511 BCORL1Q5H9F3 1711 aa15.41■□□□□ 0.06
SPG11-217ENST00000559511 ZNF326Q5BKZ1 582 aaKnown RBP15.4■□□□□ 0.06
SPG11-217ENST00000559511 UHRF1BP1Q6BDS2 1440 aa15.4■□□□□ 0.06
SPG11-217ENST00000559511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.06
SPG11-217ENST00000559511 KIF7Q2M1P5 1343 aa15.4■□□□□ 0.06
SPG11-217ENST00000559511 DEPDC5O75140 1603 aa15.39■□□□□ 0.05
SPG11-217ENST00000559511 KIDINS220Q9ULH0 1771 aa15.39■□□□□ 0.05
SPG11-217ENST00000559511 RIMBP3CA6NJZ7 1639 aa15.39■□□□□ 0.05
SPG11-217ENST00000559511 RIMBP3BA6NNM3 1639 aa15.39■□□□□ 0.05
SPG11-217ENST00000559511 RIMBP3Q9UFD9 1639 aa15.39■□□□□ 0.05
SPG11-217ENST00000559511 PELP1Q8IZL8 1130 aaKnown RBP15.38■□□□□ 0.05
SPG11-217ENST00000559511 USP47Q96K76 1375 aa15.38■□□□□ 0.05
SPG11-217ENST00000559511 RALGAPBQ86X10 1494 aa15.38■□□□□ 0.05
SPG11-217ENST00000559511 CD109Q6YHK3 1445 aa15.38■□□□□ 0.05
SPG11-217ENST00000559511 PLA2R1Q13018 1463 aa15.37■□□□□ 0.05
SPG11-217ENST00000559511 E9PCH4 1651 aa15.36■□□□□ 0.05
SPG11-217ENST00000559511 EIF2AK4Q9P2K8 1649 aaKnown RBP15.35■□□□□ 0.05
SPG11-217ENST00000559511 CCDC144AA2RUR9 1427 aa15.33■□□□□ 0.04
SPG11-217ENST00000559511 ZNF518AQ6AHZ1 1483 aa15.33■□□□□ 0.04
SPG11-217ENST00000559511 ATP10AO60312 1499 aa15.33■□□□□ 0.04
SPG11-217ENST00000559511 PRKRIP1Q9H875 184 aaPredicted RBP15.32■□□□□ 0.04
SPG11-217ENST00000559511 MAP3K4Q9Y6R4 1608 aa15.32■□□□□ 0.04
SPG11-217ENST00000559511 TET3O43151 1660 aa15.32■□□□□ 0.04
SPG11-217ENST00000559511 KDM2AQ9Y2K7 1162 aa15.32■□□□□ 0.04
SPG11-217ENST00000559511 CCDC184Q52MB2 194 aa15.31■□□□□ 0.04
SPG11-217ENST00000559511 CYB5RLQ6IPT4 315 aa15.31■□□□□ 0.04
SPG11-217ENST00000559511 DCAF11Q8TEB1 546 aa15.31■□□□□ 0.04
SPG11-217ENST00000559511 VWDEQ8N2E2 1590 aa15.31■□□□□ 0.04
SPG11-217ENST00000559511 MROH1Q8NDA8 1641 aa15.31■□□□□ 0.04
SPG11-217ENST00000559511 SPHKAPQ2M3C7 1700 aa15.31■□□□□ 0.04
SPG11-217ENST00000559511 POGZQ7Z3K3 1410 aa15.3■□□□□ 0.04
SPG11-217ENST00000559511 TRPM1Q7Z4N2 1603 aa15.3■□□□□ 0.04
SPG11-217ENST00000559511 DHX29Q7Z478 1369 aaKnown RBP15.29■□□□□ 0.04
SPG11-217ENST00000559511 MYT1LQ9UL68 1186 aa15.29■□□□□ 0.04
SPG11-217ENST00000559511 PRDM15P57071 1507 aaPredicted RBP15.29■□□□□ 0.04
SPG11-217ENST00000559511 CARD11Q9BXL7 1154 aa15.29■□□□□ 0.04
SPG11-217ENST00000559511 HECW2Q9P2P5 1572 aa15.29■□□□□ 0.04
SPG11-217ENST00000559511 NEO1Q92859 1461 aa15.28■□□□□ 0.04
SPG11-217ENST00000559511 CEP152O94986 1710 aa15.27■□□□□ 0.04
SPG11-217ENST00000559511 GLI2P10070 1586 aa15.27■□□□□ 0.03
SPG11-217ENST00000559511 HNRNPUQ00839 825 aaKnown RBP eCLIP15.26■□□□□ 0.03
SPG11-217ENST00000559511 MLH3Q9UHC1 1453 aa15.26■□□□□ 0.03
SPG11-217ENST00000559511 PRAG1Q86YV5 1406 aa15.26■□□□□ 0.03
SPG11-217ENST00000559511 RICTORQ6R327 1708 aa15.26■□□□□ 0.03
SPG11-217ENST00000559511 A2MP01023 1474 aa15.26■□□□□ 0.03
SPG11-217ENST00000559511 KIF3BO15066 747 aa15.26■□□□□ 0.03
SPG11-217ENST00000559511 ABCA6Q8N139 1617 aa15.25■□□□□ 0.03
SPG11-217ENST00000559511 RNF17Q9BXT8 1623 aaKnown RBP15.25■□□□□ 0.03
SPG11-217ENST00000559511 TRPM2O94759 1503 aa15.25■□□□□ 0.03
SPG11-217ENST00000559511 ARID4BQ4LE39 1312 aaPredicted RBP15.25■□□□□ 0.03
SPG11-217ENST00000559511 POLR3GLQ9BT43 218 aa15.25■□□□□ 0.03
SPG11-217ENST00000559511 ROCK2O75116 1388 aaKnown RBP15.24■□□□□ 0.03
SPG11-217ENST00000559511 RGL3Q3MIN7 710 aa15.24■□□□□ 0.03
SPG11-217ENST00000559511 KANK1Q14678 1352 aa15.24■□□□□ 0.03
SPG11-217ENST00000559511 FRMPD1Q5SYB0 1578 aa15.24■□□□□ 0.03
SPG11-217ENST00000559511 CLTCL1P53675 1640 aa15.23■□□□□ 0.03
SPG11-217ENST00000559511 ST20-MTHFSA0A0A6YYL1 179 aa15.23■□□□□ 0.03
SPG11-217ENST00000559511 FKBP8Q14318 412 aa15.23■□□□□ 0.03
SPG11-217ENST00000559511 MRS2Q9HD23 443 aa15.23■□□□□ 0.03
SPG11-217ENST00000559511 PTPRTO14522 1441 aa15.22■□□□□ 0.03
SPG11-217ENST00000559511 DIP2BQ9P265 1576 aa15.22■□□□□ 0.03
SPG11-217ENST00000559511 PPRC1Q5VV67 1664 aaKnown RBP15.21■□□□□ 0.03
SPG11-217ENST00000559511 TSPOAP1O95153 1857 aa15.2■□□□□ 0.02
SPG11-217ENST00000559511 EFCAB6Q5THR3 1501 aa15.2■□□□□ 0.02
SPG11-217ENST00000559511 LAMC1P11047 1609 aa15.2■□□□□ 0.02
SPG11-217ENST00000559511 FAM9BQ8IZU0 186 aa15.19■□□□□ 0.02
SPG11-217ENST00000559511 CFAP65Q6ZU64 1925 aaKnown RBP15.19■□□□□ 0.02
SPG11-217ENST00000559511 RAPGEF3O95398 923 aa15.19■□□□□ 0.02
SPG11-217ENST00000559511 NBPF1Q3BBV0 1214 aa15.19■□□□□ 0.02
SPG11-217ENST00000559511 BCANQ96GW7 911 aa15.19■□□□□ 0.02
SPG11-217ENST00000559511 LMTK2Q8IWU2 1503 aa15.18■□□□□ 0.02
SPG11-217ENST00000559511 DIP2CQ9Y2E4 1556 aa15.18■□□□□ 0.02
SPG11-217ENST00000559511 KIF1BO60333 1816 aa15.18■□□□□ 0.02
SPG11-217ENST00000559511 GPRASP1Q5JY77 1395 aa15.18■□□□□ 0.02
SPG11-217ENST00000559511 CNGB1Q14028 1251 aaPredicted RBP15.16■□□□□ 0.02
SPG11-217ENST00000559511 NEFLP07196 543 aa15.16■□□□□ 0.02
SPG11-217ENST00000559511 MADDQ8WXG6 1647 aa15.15■□□□□ 0.02
SPG11-217ENST00000559511 NEURL4Q96JN8 1562 aa15.13■□□□□ 0.01
SPG11-217ENST00000559511 UGGT1Q9NYU2 1555 aa15.13■□□□□ 0.01
SPG11-217ENST00000559511 FAM69CQ0P6D2 419 aa15.13■□□□□ 0.01
SPG11-217ENST00000559511 KIF13AQ9H1H9 1805 aa15.13■□□□□ 0.01
SPG11-217ENST00000559511 IFT172Q9UG01 1749 aa15.12■□□□□ 0.01
SPG11-217ENST00000559511 MROH2AA6NES4 1674 aa15.12■□□□□ 0.01
SPG11-217ENST00000559511 CAMSAP1Q5T5Y3 1602 aa15.12■□□□□ 0.01
SPG11-217ENST00000559511 ZBED9Q6R2W3 1325 aa15.11■□□□□ 0.01
SPG11-217ENST00000559511 ABCC3O15438 1527 aa15.1■□□□□ 0.01
SPG11-217ENST00000559511 ZMYM4Q5VZL5 1548 aa15.1■□□□□ 0.01
SPG11-217ENST00000559511 COL17A1Q9UMD9 1497 aaPredicted RBP15.1■□□□□ 0.01
SPG11-217ENST00000559511 YEATS2Q9ULM3 1422 aa15.1■□□□□ 0.01
SPG11-217ENST00000559511 GGT6Q6P531 493 aa15.1■□□□□ 0.01
SPG11-217ENST00000559511 SIGLEC1Q9BZZ2 1709 aa15.09■□□□□ 0.01
SPG11-217ENST00000559511 TESK2Q96S53 571 aa15.09■□□□□ 0.01
SPG11-217ENST00000559511 IQGAP1P46940 1657 aa15.09■□□□□ 0.01
SPG11-217ENST00000559511 NPATQ14207 1427 aa15.09■□□□□ 0.01
SPG11-217ENST00000559511 DISP3Q9P2K9 1392 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms