RNA–Protein interactions for RNA: ENST00000559476.2

ZEB1-215, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 1,205 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-215ENST00000559476 KCTD12Q96CX2 325 aaKnown RBP10.15□□□□□ -0.78
ZEB1-215ENST00000559476 NBPF3Q9H094 633 aa10.15□□□□□ -0.78
ZEB1-215ENST00000559476 MRPL50Q8N5N7 158 aaKnown RBP10.13□□□□□ -0.79
ZEB1-215ENST00000559476 GOLGA8CPA6NN73 597 aa10.12□□□□□ -0.79
ZEB1-215ENST00000559476 SPDYE16A6NNV3 312 aaPredicted RBP10.12□□□□□ -0.79
ZEB1-215ENST00000559476 WDR70Q9NW82 654 aa10.12□□□□□ -0.79
ZEB1-215ENST00000559476 ONECUT3O60422 494 aaPredicted RBP10.1□□□□□ -0.79
ZEB1-215ENST00000559476 PDIA6Q15084 440 aa10.1□□□□□ -0.79
ZEB1-215ENST00000559476 E2F4Q16254 413 aa10.1□□□□□ -0.79
ZEB1-215ENST00000559476 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
ZEB1-215ENST00000559476 RABGEF1Q9UJ41 708 aa10.1□□□□□ -0.79
ZEB1-215ENST00000559476 ARIH1Q9Y4X5 557 aaPredicted RBP10.09□□□□□ -0.79
ZEB1-215ENST00000559476 ZCCHC6Q5VYS8 1495 aaKnown RBP10.08□□□□□ -0.8
ZEB1-215ENST00000559476 C6orf132Q5T0Z8 1188 aa10.07□□□□□ -0.8
ZEB1-215ENST00000559476 WNT2BQ93097 391 aa10.07□□□□□ -0.8
ZEB1-215ENST00000559476 THSD4Q6ZMP0 1018 aa10.06□□□□□ -0.8
ZEB1-215ENST00000559476 COL9A1P20849 921 aa10.05□□□□□ -0.8
ZEB1-215ENST00000559476 LAPTM4BQ86VI4 370 aa10.05□□□□□ -0.8
ZEB1-215ENST00000559476 DDX12PQ92771 950 aa10.04□□□□□ -0.8
ZEB1-215ENST00000559476 PROX2Q3B8N5 592 aa10.03□□□□□ -0.8
ZEB1-215ENST00000559476 PTPN5P54829 565 aa10.02□□□□□ -0.81
ZEB1-215ENST00000559476 EN1Q05925 392 aaPredicted RBP10.02□□□□□ -0.81
ZEB1-215ENST00000559476 NBR1Q14596 966 aa10.01□□□□□ -0.81
ZEB1-215ENST00000559476 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
ZEB1-215ENST00000559476 RBM33Q96EV2 1170 aaKnown RBP10.01□□□□□ -0.81
ZEB1-215ENST00000559476 TRIM6-TRIM34B2RNG4 842 aa10□□□□□ -0.81
ZEB1-215ENST00000559476 KIAA1468Q9P260 1216 aa10□□□□□ -0.81
ZEB1-215ENST00000559476 MAP3K7O43318 606 aa9.99□□□□□ -0.81
ZEB1-215ENST00000559476 IFFO2Q5TF58 517 aa9.99□□□□□ -0.81
ZEB1-215ENST00000559476 CERKQ8TCT0 537 aa9.98□□□□□ -0.81
ZEB1-215ENST00000559476 NYAP1Q6ZVC0 841 aa9.96□□□□□ -0.82
ZEB1-215ENST00000559476 DCAF1Q9Y4B6 1507 aa9.96□□□□□ -0.82
ZEB1-215ENST00000559476 PACS2Q86VP3 889 aa9.95□□□□□ -0.82
ZEB1-215ENST00000559476 ZFRQ96KR1 1074 aaKnown RBP9.95□□□□□ -0.82
ZEB1-215ENST00000559476 SOWAHBA6NEL2 793 aa9.94□□□□□ -0.82
ZEB1-215ENST00000559476 FAM98CQ17RN3 349 aaKnown RBP9.94□□□□□ -0.82
ZEB1-215ENST00000559476 TSHZ2Q9NRE2 1034 aa9.94□□□□□ -0.82
ZEB1-215ENST00000559476 TSR1Q2NL82 804 aaKnown RBP9.93□□□□□ -0.82
ZEB1-215ENST00000559476 GRXCR2A6NFK2 248 aa9.92□□□□□ -0.82
ZEB1-215ENST00000559476 PLCB2Q00722 1185 aa9.91□□□□□ -0.82
ZEB1-215ENST00000559476 RGS20O76081 388 aa9.9□□□□□ -0.82
ZEB1-215ENST00000559476 ARHGEF1Q92888 912 aaKnown RBP9.9□□□□□ -0.82
ZEB1-215ENST00000559476 SEPT9Q9UHD8 586 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-215ENST00000559476 ABCC9O60706 1549 aa9.89□□□□□ -0.83
ZEB1-215ENST00000559476 PRSS12P56730 875 aa9.89□□□□□ -0.83
ZEB1-215ENST00000559476 CDCA7LQ96GN5 454 aa9.89□□□□□ -0.83
ZEB1-215ENST00000559476 OSBPP22059 807 aa9.88□□□□□ -0.83
ZEB1-215ENST00000559476 BCAMP50895 628 aa9.88□□□□□ -0.83
ZEB1-215ENST00000559476 LRCH3Q96II8 777 aa9.88□□□□□ -0.83
ZEB1-215ENST00000559476 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
ZEB1-215ENST00000559476 TSKSQ9UJT2 592 aa9.88□□□□□ -0.83
ZEB1-215ENST00000559476 P3H3Q8IVL6 736 aa9.87□□□□□ -0.83
ZEB1-215ENST00000559476 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.87□□□□□ -0.83
ZEB1-215ENST00000559476 TSR3Q9UJK0 312 aaKnown RBP9.86□□□□□ -0.83
ZEB1-215ENST00000559476 NBPF26B4DH59 902 aa9.85□□□□□ -0.83
ZEB1-215ENST00000559476 ITGBL1O95965 494 aaPredicted RBP9.85□□□□□ -0.83
ZEB1-215ENST00000559476 MYO15BQ96JP2 1530 aa9.84□□□□□ -0.83
ZEB1-215ENST00000559476 PRIM1P49642 420 aaKnown RBP9.84□□□□□ -0.83
ZEB1-215ENST00000559476 A0A0G2JS52 829 aa9.83□□□□□ -0.84
ZEB1-215ENST00000559476 WBP1LQ9NX94 342 aa9.83□□□□□ -0.84
ZEB1-215ENST00000559476 TATDN2Q93075 761 aa9.82□□□□□ -0.84
ZEB1-215ENST00000559476 HPS5Q9UPZ3 1129 aa9.82□□□□□ -0.84
ZEB1-215ENST00000559476 NACADO15069 1562 aa9.81□□□□□ -0.84
ZEB1-215ENST00000559476 CDHR5Q9HBB8 845 aa9.8□□□□□ -0.84
ZEB1-215ENST00000559476 PNMA3Q9UL41 463 aa9.8□□□□□ -0.84
ZEB1-215ENST00000559476 HDGFP51858 240 aaKnown RBP9.79□□□□□ -0.84
ZEB1-215ENST00000559476 PPP4CP60510 307 aa9.79□□□□□ -0.84
ZEB1-215ENST00000559476 KCNV2Q8TDN2 545 aa9.79□□□□□ -0.84
ZEB1-215ENST00000559476 FAM198AQ9UFP1 575 aa9.79□□□□□ -0.84
ZEB1-215ENST00000559476 KCNC4Q03721 635 aa9.78□□□□□ -0.84
ZEB1-215ENST00000559476 TTC13Q8NBP0 860 aa9.78□□□□□ -0.84
ZEB1-215ENST00000559476 NECTIN2Q92692 538 aa9.77□□□□□ -0.85
ZEB1-215ENST00000559476 SMAPO00193 183 aa9.76□□□□□ -0.85
ZEB1-215ENST00000559476 SAMD7Q7Z3H4 446 aa9.76□□□□□ -0.85
ZEB1-215ENST00000559476 NPDC1Q9NQX5 325 aaPredicted RBP9.76□□□□□ -0.85
ZEB1-215ENST00000559476 RB1CC1Q8TDY2 1594 aa9.75□□□□□ -0.85
ZEB1-215ENST00000559476 HAP1P54257 671 aaPredicted RBP9.75□□□□□ -0.85
ZEB1-215ENST00000559476 NUDT18Q6ZVK8 323 aa9.75□□□□□ -0.85
ZEB1-215ENST00000559476 PADI6Q6TGC4 694 aa9.74□□□□□ -0.85
ZEB1-215ENST00000559476 SLC4A3P48751 1232 aa9.73□□□□□ -0.85
ZEB1-215ENST00000559476 MLLT3P42568 568 aaPredicted RBP9.72□□□□□ -0.85
ZEB1-215ENST00000559476 C3orf80F5H4A9 247 aa9.71□□□□□ -0.86
ZEB1-215ENST00000559476 SLF2Q8IX21 1173 aa9.7□□□□□ -0.86
ZEB1-215ENST00000559476 PTGDRQ13258 359 aa9.68□□□□□ -0.86
ZEB1-215ENST00000559476 SCRIBQ14160 1630 aa9.67□□□□□ -0.86
ZEB1-215ENST00000559476 EYA1Q99502 592 aa9.67□□□□□ -0.86
ZEB1-215ENST00000559476 UNC13AQ9UPW8 1703 aa9.67□□□□□ -0.86
ZEB1-215ENST00000559476 SHROOM4Q9ULL8 1493 aa9.66□□□□□ -0.86
ZEB1-215ENST00000559476 RNF40O75150 1001 aa9.66□□□□□ -0.86
ZEB1-215ENST00000559476 SMYD5Q6GMV2 418 aa9.66□□□□□ -0.86
ZEB1-215ENST00000559476 IRX2Q9BZI1 471 aaPredicted RBP9.66□□□□□ -0.86
ZEB1-215ENST00000559476 IL21Q9HBE4 155 aa9.66□□□□□ -0.86
ZEB1-215ENST00000559476 TJAP1Q5JTD0 557 aa9.65□□□□□ -0.86
ZEB1-215ENST00000559476 SWT1Q5T5J6 900 aaKnown RBP9.65□□□□□ -0.86
ZEB1-215ENST00000559476 RBM46Q8TBY0 533 aaKnown RBP9.65□□□□□ -0.86
ZEB1-215ENST00000559476 PRR14Q9BWN1 585 aa9.65□□□□□ -0.86
ZEB1-215ENST00000559476 NUTM2FA1L443 756 aa9.64□□□□□ -0.87
ZEB1-215ENST00000559476 FCHSD2O94868 740 aa9.64□□□□□ -0.87
ZEB1-215ENST00000559476 VSIG10Q8N0Z9 540 aa9.64□□□□□ -0.87
ZEB1-215ENST00000559476 DNAJB2P25686 324 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms