RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 DAPK1P53355 1430 aa33.29■■■□□ 2.92
CRNDE-205ENST00000558952 DNMT1P26358 1616 aaKnown RBP33.28■■■□□ 2.92
CRNDE-205ENST00000558952 EIF2AK4Q9P2K8 1649 aaKnown RBP33.28■■■□□ 2.92
CRNDE-205ENST00000558952 DUOX2Q9NRD8 1548 aa33.28■■■□□ 2.92
CRNDE-205ENST00000558952 DMRT2Q9Y5R5 561 aa33.26■■■□□ 2.91
CRNDE-205ENST00000558952 KIF15Q9NS87 1388 aa33.24■■■□□ 2.91
CRNDE-205ENST00000558952 ILDR1Q86SU0 546 aaPredicted RBP33.24■■■□□ 2.91
CRNDE-205ENST00000558952 RNF17Q9BXT8 1623 aaKnown RBP33.24■■■□□ 2.91
CRNDE-205ENST00000558952 MYO3AQ8NEV4 1616 aa33.23■■■□□ 2.91
CRNDE-205ENST00000558952 RRP7BPQ9NSQ0 103 aa33.21■■■□□ 2.91
CRNDE-205ENST00000558952 STRCQ7RTU9 1775 aa33.2■■■□□ 2.91
CRNDE-205ENST00000558952 FAM50AQ14320 339 aaKnown RBP33.2■■■□□ 2.91
CRNDE-205ENST00000558952 PZPP20742 1482 aa33.19■■■□□ 2.9
CRNDE-205ENST00000558952 ERBINQ96RT1 1412 aa33.18■■■□□ 2.9
CRNDE-205ENST00000558952 ZNF142P52746 1687 aaPredicted RBP33.17■■■□□ 2.9
CRNDE-205ENST00000558952 ANKRD30AQ9BXX3 1397 aa33.17■■■□□ 2.9
CRNDE-205ENST00000558952 CEP170BQ9Y4F5 1589 aaPredicted RBP33.17■■■□□ 2.9
CRNDE-205ENST00000558952 CHIC2Q9UKJ5 165 aa33.16■■■□□ 2.9
CRNDE-205ENST00000558952 ZC3H13Q5T200 1668 aaKnown RBP33.16■■■□□ 2.9
CRNDE-205ENST00000558952 NCOA1Q15788 1441 aa33.15■■■□□ 2.9
CRNDE-205ENST00000558952 CAMSAP1Q5T5Y3 1602 aa33.15■■■□□ 2.9
CRNDE-205ENST00000558952 TNRQ92752 1358 aa33.14■■■□□ 2.9
CRNDE-205ENST00000558952 FBXO31Q5XUX0 539 aaPredicted RBP33.14■■■□□ 2.9
CRNDE-205ENST00000558952 ABCC3O15438 1527 aa33.13■■■□□ 2.89
CRNDE-205ENST00000558952 PTPRTO14522 1441 aa33.11■■■□□ 2.89
CRNDE-205ENST00000558952 MROH1Q8NDA8 1641 aa33.1■■■□□ 2.89
CRNDE-205ENST00000558952 A2ML1A8K2U0 1454 aa33.1■■■□□ 2.89
CRNDE-205ENST00000558952 FBXO41Q8TF61 875 aa33.06■■■□□ 2.88
CRNDE-205ENST00000558952 PLA2R1Q13018 1463 aa33.05■■■□□ 2.88
CRNDE-205ENST00000558952 PRDM15P57071 1507 aaPredicted RBP33.05■■■□□ 2.88
CRNDE-205ENST00000558952 ADGRL2O95490 1459 aa33.05■■■□□ 2.88
CRNDE-205ENST00000558952 CEP152O94986 1710 aa33.03■■■□□ 2.88
CRNDE-205ENST00000558952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.03■■■□□ 2.88
CRNDE-205ENST00000558952 KANK1Q14678 1352 aa33.02■■■□□ 2.88
CRNDE-205ENST00000558952 PPARGC1BQ86YN6 1023 aaKnown RBP33.02■■■□□ 2.88
CRNDE-205ENST00000558952 PKD2Q13563 968 aa33.01■■■□□ 2.87
CRNDE-205ENST00000558952 NCKAP5LQ9HCH0 1330 aa33.01■■■□□ 2.87
CRNDE-205ENST00000558952 NLRP1Q9C000 1473 aa33■■■□□ 2.87
CRNDE-205ENST00000558952 CERKQ8TCT0 537 aa32.99■■■□□ 2.87
CRNDE-205ENST00000558952 DEPDC5O75140 1603 aa32.99■■■□□ 2.87
CRNDE-205ENST00000558952 SPATA31D1Q6ZQQ2 1576 aa32.97■■■□□ 2.87
CRNDE-205ENST00000558952 ERVK-7P63135 1459 aa32.96■■■□□ 2.87
CRNDE-205ENST00000558952 THEMISQ8N1K5 641 aaPredicted RBP32.92■■■□□ 2.86
CRNDE-205ENST00000558952 ARHGAP31Q2M1Z3 1444 aa32.92■■■□□ 2.86
CRNDE-205ENST00000558952 UGGT1Q9NYU2 1555 aa32.92■■■□□ 2.86
CRNDE-205ENST00000558952 ANKRD50Q9ULJ7 1429 aa32.91■■■□□ 2.86
CRNDE-205ENST00000558952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.86■■■□□ 2.85
CRNDE-205ENST00000558952 LMTK2Q8IWU2 1503 aa32.86■■■□□ 2.85
CRNDE-205ENST00000558952 ITGAEP38570 1179 aa32.85■■■□□ 2.85
CRNDE-205ENST00000558952 ROCK1Q13464 1354 aa32.84■■■□□ 2.85
CRNDE-205ENST00000558952 VWDEQ8N2E2 1590 aa32.84■■■□□ 2.85
CRNDE-205ENST00000558952 ANKLE2Q86XL3 938 aa32.83■■■□□ 2.85
CRNDE-205ENST00000558952 POLR1AO95602 1720 aaPredicted RBP32.82■■■□□ 2.85
CRNDE-205ENST00000558952 CFAP65Q6ZU64 1925 aaKnown RBP32.81■■■□□ 2.84
CRNDE-205ENST00000558952 LTBP4Q8N2S1 1624 aa32.79■■■□□ 2.84
CRNDE-205ENST00000558952 EFCAB6Q5THR3 1501 aa32.76■■■□□ 2.83
CRNDE-205ENST00000558952 ZNF335Q9H4Z2 1342 aaPredicted RBP32.76■■■□□ 2.83
CRNDE-205ENST00000558952 NEURL4Q96JN8 1562 aa32.75■■■□□ 2.83
CRNDE-205ENST00000558952 UBR1Q8IWV7 1749 aa32.71■■■□□ 2.83
CRNDE-205ENST00000558952 RRBP1Q9P2E9 1410 aaKnown RBP32.71■■■□□ 2.83
CRNDE-205ENST00000558952 UNC13BO14795 1591 aa32.7■■■□□ 2.83
CRNDE-205ENST00000558952 NPHP4O75161 1426 aaPredicted RBP32.69■■■□□ 2.82
CRNDE-205ENST00000558952 STAG3Q9UJ98 1225 aa32.69■■■□□ 2.82
CRNDE-205ENST00000558952 MED14O60244 1454 aa32.68■■■□□ 2.82
CRNDE-205ENST00000558952 IQSEC2Q5JU85 1478 aa32.68■■■□□ 2.82
CRNDE-205ENST00000558952 RPRD2Q5VT52 1461 aaKnown RBP32.67■■■□□ 2.82
CRNDE-205ENST00000558952 PIK3C2BO00750 1634 aa32.66■■■□□ 2.82
CRNDE-205ENST00000558952 TET3O43151 1660 aa32.66■■■□□ 2.82
CRNDE-205ENST00000558952 NOS1P29475 1434 aa32.65■■■□□ 2.82
CRNDE-205ENST00000558952 SYNMO15061 1565 aa32.63■■■□□ 2.81
CRNDE-205ENST00000558952 IQGAP1P46940 1657 aa32.62■■■□□ 2.81
CRNDE-205ENST00000558952 IDI1Q13907 227 aa32.61■■■□□ 2.81
CRNDE-205ENST00000558952 SLIT1O75093 1534 aa32.61■■■□□ 2.81
CRNDE-205ENST00000558952 SCAF11Q99590 1463 aaKnown RBP32.61■■■□□ 2.81
CRNDE-205ENST00000558952 GCC2Q8IWJ2 1684 aa32.6■■■□□ 2.81
CRNDE-205ENST00000558952 SLC52A1Q9NWF4 448 aa32.59■■■□□ 2.81
CRNDE-205ENST00000558952 EID1Q9Y6B2 187 aa32.59■■■□□ 2.81
CRNDE-205ENST00000558952 ARHGAP23Q9P227 1491 aa32.59■■■□□ 2.81
CRNDE-205ENST00000558952 TXNDC2Q86VQ3 553 aa32.58■■■□□ 2.81
CRNDE-205ENST00000558952 NUP155O75694 1391 aa32.58■■■□□ 2.81
CRNDE-205ENST00000558952 KDM5AP29375 1690 aaKnown RBP32.57■■■□□ 2.8
CRNDE-205ENST00000558952 IQGAP3Q86VI3 1631 aa32.57■■■□□ 2.8
CRNDE-205ENST00000558952 CPS1P31327 1500 aa32.55■■■□□ 2.8
CRNDE-205ENST00000558952 TMEM2Q9UHN6 1383 aa32.55■■■□□ 2.8
CRNDE-205ENST00000558952 ADGRB3O60242 1522 aa32.53■■■□□ 2.8
CRNDE-205ENST00000558952 LTKP29376 864 aa32.53■■■□□ 2.8
CRNDE-205ENST00000558952 E9PCH4 1651 aa32.49■■■□□ 2.79
CRNDE-205ENST00000558952 UBAP1LF5GYI3 381 aa32.45■■■□□ 2.79
CRNDE-205ENST00000558952 NAIPQ13075 1403 aa32.44■■■□□ 2.78
CRNDE-205ENST00000558952 CHGAP10645 457 aaKnown RBP32.39■■■□□ 2.78
CRNDE-205ENST00000558952 HFM1A2PYH4 1435 aa32.38■■■□□ 2.77
CRNDE-205ENST00000558952 HDGFP51858 240 aaKnown RBP32.37■■■□□ 2.77
CRNDE-205ENST00000558952 TMEM131LA2VDJ0 1609 aa32.36■■■□□ 2.77
CRNDE-205ENST00000558952 BCANQ96GW7 911 aa32.34■■■□□ 2.77
CRNDE-205ENST00000558952 PPP1R15AO75807 674 aaPredicted RBP32.33■■■□□ 2.77
CRNDE-205ENST00000558952 RIMS2Q9UQ26 1411 aa32.32■■■□□ 2.76
CRNDE-205ENST00000558952 STRCP1A6NGW2 1772 aa32.32■■■□□ 2.76
CRNDE-205ENST00000558952 MYO5BQ9ULV0 1848 aa32.31■■■□□ 2.76
CRNDE-205ENST00000558952 TOM1O60784 492 aa32.31■■■□□ 2.76
CRNDE-205ENST00000558952 TRIM52Q96A61 297 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms