RNA–Protein interactions for RNA: ENST00000558863.5

ZEB1-214, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,355 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-214ENST00000558863 MADDQ8WXG6 1647 aa36.7■■■■□ 3.47
ZEB1-214ENST00000558863 GCC2Q8IWJ2 1684 aa36.7■■■■□ 3.47
ZEB1-214ENST00000558863 NAIPQ13075 1403 aa36.7■■■■□ 3.46
ZEB1-214ENST00000558863 FER1L4A9Z1Z3 1794 aa36.69■■■■□ 3.46
ZEB1-214ENST00000558863 CNTLNQ9NXG0 1405 aa36.69■■■■□ 3.46
ZEB1-214ENST00000558863 DEPDC5O75140 1603 aa36.65■■■■□ 3.46
ZEB1-214ENST00000558863 PRDM15P57071 1507 aaPredicted RBP36.63■■■■□ 3.45
ZEB1-214ENST00000558863 MROH1Q8NDA8 1641 aa36.61■■■■□ 3.45
ZEB1-214ENST00000558863 KDM5DQ9BY66 1539 aa36.61■■■■□ 3.45
ZEB1-214ENST00000558863 RIMS1Q86UR5 1692 aaKnown RBP36.6■■■■□ 3.45
ZEB1-214ENST00000558863 KANK1Q14678 1352 aa36.6■■■■□ 3.45
ZEB1-214ENST00000558863 ZC3H13Q5T200 1668 aaKnown RBP36.58■■■■□ 3.45
ZEB1-214ENST00000558863 WASHC2CQ9Y4E1 1318 aa36.57■■■■□ 3.45
ZEB1-214ENST00000558863 TRIM26Q12899 539 aaPredicted RBP36.57■■■■□ 3.45
ZEB1-214ENST00000558863 MROH2AA6NES4 1674 aa36.57■■■■□ 3.44
ZEB1-214ENST00000558863 PTPRMP28827 1452 aa36.55■■■■□ 3.44
ZEB1-214ENST00000558863 UNC13BO14795 1591 aa36.55■■■■□ 3.44
ZEB1-214ENST00000558863 CLTCQ00610 1675 aaKnown RBP36.53■■■■□ 3.44
ZEB1-214ENST00000558863 ACIN1Q9UKV3 1341 aaKnown RBP36.53■■■■□ 3.44
ZEB1-214ENST00000558863 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.53■■■■□ 3.44
ZEB1-214ENST00000558863 ABCC3O15438 1527 aa36.51■■■■□ 3.43
ZEB1-214ENST00000558863 SETD5Q9C0A6 1442 aa36.51■■■■□ 3.43
ZEB1-214ENST00000558863 VWDEQ8N2E2 1590 aa36.5■■■■□ 3.43
ZEB1-214ENST00000558863 ZMYM3Q14202 1370 aa36.47■■■■□ 3.43
ZEB1-214ENST00000558863 LMTK2Q8IWU2 1503 aa36.46■■■■□ 3.43
ZEB1-214ENST00000558863 CEP152O94986 1710 aa36.43■■■■□ 3.42
ZEB1-214ENST00000558863 C3P01024 1663 aa36.42■■■■□ 3.42
ZEB1-214ENST00000558863 NUP155O75694 1391 aa36.41■■■■□ 3.42
ZEB1-214ENST00000558863 IQGAP3Q86VI3 1631 aa36.4■■■■□ 3.42
ZEB1-214ENST00000558863 CAMSAP1Q5T5Y3 1602 aa36.39■■■■□ 3.42
ZEB1-214ENST00000558863 ARHGAP31Q2M1Z3 1444 aa36.37■■■■□ 3.41
ZEB1-214ENST00000558863 PZPP20742 1482 aa36.37■■■■□ 3.41
ZEB1-214ENST00000558863 HRCP23327 699 aa36.35■■■■□ 3.41
ZEB1-214ENST00000558863 AEBP2Q6ZN18 517 aaPredicted RBP36.35■■■■□ 3.41
ZEB1-214ENST00000558863 RAB3GAP2Q9H2M9 1393 aa36.35■■■■□ 3.41
ZEB1-214ENST00000558863 NPATQ14207 1427 aa36.34■■■■□ 3.41
ZEB1-214ENST00000558863 TET3O43151 1660 aa36.34■■■■□ 3.41
ZEB1-214ENST00000558863 CEBPAP49715 358 aaPredicted RBP36.33■■■■□ 3.41
ZEB1-214ENST00000558863 TRIM52Q96A61 297 aa36.32■■■■□ 3.4
ZEB1-214ENST00000558863 EFCAB6Q5THR3 1501 aa36.32■■■■□ 3.4
ZEB1-214ENST00000558863 PLPPR3Q6T4P5 718 aa36.28■■■■□ 3.4
ZEB1-214ENST00000558863 RPRD2Q5VT52 1461 aaKnown RBP36.28■■■■□ 3.4
ZEB1-214ENST00000558863 SETD1BQ9UPS6 1966 aaKnown RBP36.24■■■■□ 3.39
ZEB1-214ENST00000558863 SPATA31D1Q6ZQQ2 1576 aa36.2■■■■□ 3.39
ZEB1-214ENST00000558863 ERVK-7P63135 1459 aa36.2■■■■□ 3.39
ZEB1-214ENST00000558863 FBXO31Q5XUX0 539 aaPredicted RBP36.18■■■■□ 3.38
ZEB1-214ENST00000558863 PREX1Q8TCU6 1659 aa36.18■■■■□ 3.38
ZEB1-214ENST00000558863 SLC4A1APQ9BWU0 796 aaKnown RBP36.17■■■■□ 3.38
ZEB1-214ENST00000558863 TNRQ92752 1358 aa36.16■■■■□ 3.38
ZEB1-214ENST00000558863 E9PCH4 1651 aa36.16■■■■□ 3.38
ZEB1-214ENST00000558863 UHRF1BP1Q6BDS2 1440 aa36.12■■■■□ 3.37
ZEB1-214ENST00000558863 NOS1P29475 1434 aa36.11■■■■□ 3.37
ZEB1-214ENST00000558863 MPHOSPH9Q99550 1183 aa36.1■■■■□ 3.37
ZEB1-214ENST00000558863 CFAP65Q6ZU64 1925 aaKnown RBP36.09■■■■□ 3.37
ZEB1-214ENST00000558863 NLRP1Q9C000 1473 aa36.09■■■■□ 3.37
ZEB1-214ENST00000558863 PKD2Q13563 968 aa36.08■■■■□ 3.37
ZEB1-214ENST00000558863 MYO3AQ8NEV4 1616 aa36.06■■■■□ 3.36
ZEB1-214ENST00000558863 PCGF6Q9BYE7 350 aa36.03■■■■□ 3.36
ZEB1-214ENST00000558863 ZNF142P52746 1687 aaPredicted RBP36.01■■■■□ 3.36
ZEB1-214ENST00000558863 SYNMO15061 1565 aa36.01■■■■□ 3.35
ZEB1-214ENST00000558863 PTPRTO14522 1441 aa36.01■■■■□ 3.35
ZEB1-214ENST00000558863 SLC52A1Q9NWF4 448 aa36.01■■■■□ 3.35
ZEB1-214ENST00000558863 A2ML1A8K2U0 1454 aa36■■■■□ 3.35
ZEB1-214ENST00000558863 LMTK3Q96Q04 1460 aa36■■■■□ 3.35
ZEB1-214ENST00000558863 SPHKAPQ2M3C7 1700 aa36■■■■□ 3.35
ZEB1-214ENST00000558863 CEP170BQ9Y4F5 1589 aaPredicted RBP35.99■■■■□ 3.35
ZEB1-214ENST00000558863 TRPM2O94759 1503 aa35.93■■■■□ 3.34
ZEB1-214ENST00000558863 PIK3C2BO00750 1634 aa35.91■■■■□ 3.34
ZEB1-214ENST00000558863 IDI1Q13907 227 aa35.89■■■■□ 3.34
ZEB1-214ENST00000558863 UGGT1Q9NYU2 1555 aa35.89■■■■□ 3.34
ZEB1-214ENST00000558863 KDM5AP29375 1690 aaKnown RBP35.88■■■■□ 3.34
ZEB1-214ENST00000558863 PLA2R1Q13018 1463 aa35.87■■■■□ 3.33
ZEB1-214ENST00000558863 FOXD1Q16676 465 aa35.87■■■■□ 3.33
ZEB1-214ENST00000558863 THEMISQ8N1K5 641 aaPredicted RBP35.86■■■■□ 3.33
ZEB1-214ENST00000558863 STAG3Q9UJ98 1225 aa35.83■■■■□ 3.33
ZEB1-214ENST00000558863 UBR1Q8IWV7 1749 aa35.82■■■■□ 3.33
ZEB1-214ENST00000558863 ADGRB3O60242 1522 aa35.82■■■■□ 3.32
ZEB1-214ENST00000558863 CCDC144AA2RUR9 1427 aa35.79■■■■□ 3.32
ZEB1-214ENST00000558863 CLTCL1P53675 1640 aa35.79■■■■□ 3.32
ZEB1-214ENST00000558863 HSPA2P54652 639 aa35.76■■■■□ 3.32
ZEB1-214ENST00000558863 ANKRD30BQ9BXX2 1392 aa35.76■■■■□ 3.32
ZEB1-214ENST00000558863 TMEM131LA2VDJ0 1609 aa35.74■■■■□ 3.31
ZEB1-214ENST00000558863 DHX57Q6P158 1386 aaKnown RBP35.72■■■■□ 3.31
ZEB1-214ENST00000558863 KIF1BO60333 1816 aa35.71■■■■□ 3.31
ZEB1-214ENST00000558863 CHGAP10645 457 aaKnown RBP35.7■■■■□ 3.31
ZEB1-214ENST00000558863 SLIT1O75093 1534 aa35.69■■■■□ 3.3
ZEB1-214ENST00000558863 ARHGAP23Q9P227 1491 aa35.68■■■■□ 3.3
ZEB1-214ENST00000558863 TMEM2Q9UHN6 1383 aa35.67■■■■□ 3.3
ZEB1-214ENST00000558863 ANKLE2Q86XL3 938 aa35.64■■■■□ 3.3
ZEB1-214ENST00000558863 HDGFP51858 240 aaKnown RBP35.64■■■■□ 3.3
ZEB1-214ENST00000558863 NEURL4Q96JN8 1562 aa35.63■■■■□ 3.29
ZEB1-214ENST00000558863 MYO5BQ9ULV0 1848 aa35.63■■■■□ 3.29
ZEB1-214ENST00000558863 EID1Q9Y6B2 187 aa35.63■■■■□ 3.29
ZEB1-214ENST00000558863 POLR1AO95602 1720 aaPredicted RBP35.58■■■■□ 3.29
ZEB1-214ENST00000558863 SCAF11Q99590 1463 aaKnown RBP35.58■■■■□ 3.29
ZEB1-214ENST00000558863 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.58■■■■□ 3.29
ZEB1-214ENST00000558863 STRCQ7RTU9 1775 aa35.57■■■■□ 3.29
ZEB1-214ENST00000558863 ZNF326Q5BKZ1 582 aaKnown RBP35.57■■■■□ 3.28
ZEB1-214ENST00000558863 DMRT2Q9Y5R5 561 aa35.57■■■■□ 3.28
ZEB1-214ENST00000558863 RIMS2Q9UQ26 1411 aa35.57■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms