RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 C9orf84Q5VXU9 1444 aa15.84■□□□□ 0.13
PSMA4-207ENST00000558635 ATP10AO60312 1499 aa15.84■□□□□ 0.13
PSMA4-207ENST00000558635 DNMT1P26358 1616 aaKnown RBP15.83■□□□□ 0.13
PSMA4-207ENST00000558635 KIDINS220Q9ULH0 1771 aa15.83■□□□□ 0.12
PSMA4-207ENST00000558635 ITGAEP38570 1179 aa15.83■□□□□ 0.12
PSMA4-207ENST00000558635 CHIC2Q9UKJ5 165 aa15.83■□□□□ 0.12
PSMA4-207ENST00000558635 INO80Q9ULG1 1556 aaPredicted RBP15.83■□□□□ 0.12
PSMA4-207ENST00000558635 DIP2CQ9Y2E4 1556 aa15.82■□□□□ 0.12
PSMA4-207ENST00000558635 ABCA6Q8N139 1617 aa15.81■□□□□ 0.12
PSMA4-207ENST00000558635 MAST1Q9Y2H9 1570 aa15.8■□□□□ 0.12
PSMA4-207ENST00000558635 SHANK2Q9UPX8 1470 aa15.8■□□□□ 0.12
PSMA4-207ENST00000558635 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
PSMA4-207ENST00000558635 ARID4BQ4LE39 1312 aaPredicted RBP15.8■□□□□ 0.12
PSMA4-207ENST00000558635 RRP7BPQ9NSQ0 103 aa15.78■□□□□ 0.12
PSMA4-207ENST00000558635 CROCC2H7BZ55 1655 aa15.78■□□□□ 0.12
PSMA4-207ENST00000558635 A2MP01023 1474 aa15.77■□□□□ 0.11
PSMA4-207ENST00000558635 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
PSMA4-207ENST00000558635 ANKRD30AQ9BXX3 1397 aa15.76■□□□□ 0.11
PSMA4-207ENST00000558635 NCOA1Q15788 1441 aa15.75■□□□□ 0.11
PSMA4-207ENST00000558635 REREQ9P2R6 1566 aa15.75■□□□□ 0.11
PSMA4-207ENST00000558635 KIF15Q9NS87 1388 aa15.75■□□□□ 0.11
PSMA4-207ENST00000558635 ADGRL2O95490 1459 aa15.74■□□□□ 0.11
PSMA4-207ENST00000558635 MLECQ14165 292 aa15.73■□□□□ 0.11
PSMA4-207ENST00000558635 PLXNC1O60486 1568 aa15.73■□□□□ 0.11
PSMA4-207ENST00000558635 SIGLEC1Q9BZZ2 1709 aa15.73■□□□□ 0.11
PSMA4-207ENST00000558635 ADGBQ8N7X0 1667 aa15.72■□□□□ 0.11
PSMA4-207ENST00000558635 ROCK1Q13464 1354 aa15.72■□□□□ 0.11
PSMA4-207ENST00000558635 AGLP35573 1532 aa15.71■□□□□ 0.11
PSMA4-207ENST00000558635 DUOX2Q9NRD8 1548 aa15.7■□□□□ 0.1
PSMA4-207ENST00000558635 KIF3BO15066 747 aa15.7■□□□□ 0.1
PSMA4-207ENST00000558635 KDM4FA0A1W2PPD8 638 aa15.69■□□□□ 0.1
PSMA4-207ENST00000558635 GGT6Q6P531 493 aa15.67■□□□□ 0.1
PSMA4-207ENST00000558635 ERBINQ96RT1 1412 aa15.66■□□□□ 0.1
PSMA4-207ENST00000558635 BCORL1Q5H9F3 1711 aa15.65■□□□□ 0.1
PSMA4-207ENST00000558635 ANKRD50Q9ULJ7 1429 aa15.65■□□□□ 0.1
PSMA4-207ENST00000558635 NAIPQ13075 1403 aa15.62■□□□□ 0.09
PSMA4-207ENST00000558635 ADAMTSL3P82987 1691 aa15.62■□□□□ 0.09
PSMA4-207ENST00000558635 EIF2AK4Q9P2K8 1649 aaKnown RBP15.61■□□□□ 0.09
PSMA4-207ENST00000558635 HFM1A2PYH4 1435 aa15.61■□□□□ 0.09
PSMA4-207ENST00000558635 ESF1Q9H501 851 aaKnown RBP15.61■□□□□ 0.09
PSMA4-207ENST00000558635 MADDQ8WXG6 1647 aa15.6■□□□□ 0.09
PSMA4-207ENST00000558635 TRIM26Q12899 539 aaPredicted RBP15.59■□□□□ 0.09
PSMA4-207ENST00000558635 WASHC2CQ9Y4E1 1318 aa15.58■□□□□ 0.08
PSMA4-207ENST00000558635 RNF17Q9BXT8 1623 aaKnown RBP15.57■□□□□ 0.08
PSMA4-207ENST00000558635 MROH1Q8NDA8 1641 aa15.56■□□□□ 0.08
PSMA4-207ENST00000558635 CNTLNQ9NXG0 1405 aa15.55■□□□□ 0.08
PSMA4-207ENST00000558635 KANK1Q14678 1352 aa15.55■□□□□ 0.08
PSMA4-207ENST00000558635 FER1L4A9Z1Z3 1794 aa15.54■□□□□ 0.08
PSMA4-207ENST00000558635 RIMS1Q86UR5 1692 aaKnown RBP15.54■□□□□ 0.08
PSMA4-207ENST00000558635 GCC2Q8IWJ2 1684 aa15.54■□□□□ 0.08
PSMA4-207ENST00000558635 PTPRMP28827 1452 aa15.54■□□□□ 0.08
PSMA4-207ENST00000558635 SETD5Q9C0A6 1442 aa15.54■□□□□ 0.08
PSMA4-207ENST00000558635 CEBPAP49715 358 aaPredicted RBP15.54■□□□□ 0.08
PSMA4-207ENST00000558635 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
PSMA4-207ENST00000558635 DEPDC5O75140 1603 aa15.54■□□□□ 0.08
PSMA4-207ENST00000558635 PRDM15P57071 1507 aaPredicted RBP15.53■□□□□ 0.08
PSMA4-207ENST00000558635 KDM5DQ9BY66 1539 aa15.53■□□□□ 0.08
PSMA4-207ENST00000558635 ZMYM3Q14202 1370 aa15.52■□□□□ 0.08
PSMA4-207ENST00000558635 ABCC3O15438 1527 aa15.52■□□□□ 0.07
PSMA4-207ENST00000558635 FAM135AQ9P2D6 1515 aa15.52■□□□□ 0.07
PSMA4-207ENST00000558635 NUP155O75694 1391 aa15.51■□□□□ 0.07
PSMA4-207ENST00000558635 CLTCQ00610 1675 aaKnown RBP15.51■□□□□ 0.07
PSMA4-207ENST00000558635 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
PSMA4-207ENST00000558635 TRIM52Q96A61 297 aa15.51■□□□□ 0.07
PSMA4-207ENST00000558635 UNC13BO14795 1591 aa15.5■□□□□ 0.07
PSMA4-207ENST00000558635 RAB3GAP2Q9H2M9 1393 aa15.49■□□□□ 0.07
PSMA4-207ENST00000558635 VWDEQ8N2E2 1590 aa15.49■□□□□ 0.07
PSMA4-207ENST00000558635 MROH2AA6NES4 1674 aa15.48■□□□□ 0.07
PSMA4-207ENST00000558635 CEP152O94986 1710 aa15.47■□□□□ 0.07
PSMA4-207ENST00000558635 FBXO31Q5XUX0 539 aaPredicted RBP15.47■□□□□ 0.07
PSMA4-207ENST00000558635 ZC3H13Q5T200 1668 aaKnown RBP15.47■□□□□ 0.07
PSMA4-207ENST00000558635 LMTK2Q8IWU2 1503 aa15.47■□□□□ 0.07
PSMA4-207ENST00000558635 C3P01024 1663 aa15.45■□□□□ 0.06
PSMA4-207ENST00000558635 POTEHQ6S545 545 aa15.45■□□□□ 0.06
PSMA4-207ENST00000558635 PZPP20742 1482 aa15.45■□□□□ 0.06
PSMA4-207ENST00000558635 ARHGAP31Q2M1Z3 1444 aa15.44■□□□□ 0.06
PSMA4-207ENST00000558635 HRCP23327 699 aa15.44■□□□□ 0.06
PSMA4-207ENST00000558635 ACIN1Q9UKV3 1341 aaKnown RBP15.43■□□□□ 0.06
PSMA4-207ENST00000558635 CAMSAP1Q5T5Y3 1602 aa15.43■□□□□ 0.06
PSMA4-207ENST00000558635 IQGAP3Q86VI3 1631 aa15.43■□□□□ 0.06
PSMA4-207ENST00000558635 NPATQ14207 1427 aa15.43■□□□□ 0.06
PSMA4-207ENST00000558635 EFCAB6Q5THR3 1501 aa15.42■□□□□ 0.06
PSMA4-207ENST00000558635 SPDYE2BA6NHP3 402 aa15.41■□□□□ 0.06
PSMA4-207ENST00000558635 SPDYE6P0CI01 402 aa15.41■□□□□ 0.06
PSMA4-207ENST00000558635 SPDYE2Q495Y8 402 aa15.41■□□□□ 0.06
PSMA4-207ENST00000558635 PCGF6Q9BYE7 350 aa15.41■□□□□ 0.06
PSMA4-207ENST00000558635 TET3O43151 1660 aa15.41■□□□□ 0.06
PSMA4-207ENST00000558635 MPHOSPH9Q99550 1183 aa15.4■□□□□ 0.06
PSMA4-207ENST00000558635 ERVK-7P63135 1459 aa15.4■□□□□ 0.06
PSMA4-207ENST00000558635 TNRQ92752 1358 aa15.39■□□□□ 0.05
PSMA4-207ENST00000558635 PKD2Q13563 968 aa15.39■□□□□ 0.05
PSMA4-207ENST00000558635 REM2Q8IYK8 340 aaPredicted RBP15.39■□□□□ 0.05
PSMA4-207ENST00000558635 RPRD2Q5VT52 1461 aaKnown RBP15.38■□□□□ 0.05
PSMA4-207ENST00000558635 CHRDL2Q6WN34 429 aa15.37■□□□□ 0.05
PSMA4-207ENST00000558635 SPATA31D1Q6ZQQ2 1576 aa15.36■□□□□ 0.05
PSMA4-207ENST00000558635 NOS1P29475 1434 aa15.35■□□□□ 0.05
PSMA4-207ENST00000558635 E9PCH4 1651 aa15.35■□□□□ 0.05
PSMA4-207ENST00000558635 PREX1Q8TCU6 1659 aa15.35■□□□□ 0.05
PSMA4-207ENST00000558635 UHRF1BP1Q6BDS2 1440 aa15.34■□□□□ 0.05
PSMA4-207ENST00000558635 CFAP65Q6ZU64 1925 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms