RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 UBE2Q2Q8WVN8 375 aa6.73□□□□□ -1.33
HMG20A-204ENST00000558288 PTPN23Q9H3S7 1636 aa6.73□□□□□ -1.33
HMG20A-204ENST00000558288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.73□□□□□ -1.33
HMG20A-204ENST00000558288 HNRNPMP52272 730 aaKnown RBP eCLIP6.73□□□□□ -1.33
HMG20A-204ENST00000558288 ZNF326Q5BKZ1 582 aaKnown RBP6.73□□□□□ -1.33
HMG20A-204ENST00000558288 EXOC6Q8TAG9 804 aa6.73□□□□□ -1.33
HMG20A-204ENST00000558288 CERKQ8TCT0 537 aa6.73□□□□□ -1.33
HMG20A-204ENST00000558288 NAIPQ13075 1403 aa6.72□□□□□ -1.33
HMG20A-204ENST00000558288 NCOA1Q15788 1441 aa6.72□□□□□ -1.33
HMG20A-204ENST00000558288 GSE1Q14687 1217 aa6.72□□□□□ -1.33
HMG20A-204ENST00000558288 CFDP1Q9UEE9 299 aaPredicted RBP6.72□□□□□ -1.33
HMG20A-204ENST00000558288 CDK13Q14004 1512 aaKnown RBP6.72□□□□□ -1.33
HMG20A-204ENST00000558288 MAGI3Q5TCQ9 1506 aa6.72□□□□□ -1.33
HMG20A-204ENST00000558288 YEATS2Q9ULM3 1422 aa6.71□□□□□ -1.33
HMG20A-204ENST00000558288 CTTNBP2Q8WZ74 1663 aa6.71□□□□□ -1.33
HMG20A-204ENST00000558288 UBAP1LF5GYI3 381 aa6.71□□□□□ -1.33
HMG20A-204ENST00000558288 DMRT2Q9Y5R5 561 aa6.71□□□□□ -1.34
HMG20A-204ENST00000558288 SLC4A3P48751 1232 aa6.7□□□□□ -1.34
HMG20A-204ENST00000558288 DDRGK1Q96HY6 314 aa6.7□□□□□ -1.34
HMG20A-204ENST00000558288 MPHOSPH9Q99550 1183 aa6.7□□□□□ -1.34
HMG20A-204ENST00000558288 WASHC2CQ9Y4E1 1318 aa6.7□□□□□ -1.34
HMG20A-204ENST00000558288 FYCO1Q9BQS8 1478 aa6.7□□□□□ -1.34
HMG20A-204ENST00000558288 ABCA8O94911 1581 aa6.7□□□□□ -1.34
HMG20A-204ENST00000558288 ARHGAP5Q13017 1502 aa6.7□□□□□ -1.34
HMG20A-204ENST00000558288 MAP3K4Q9Y6R4 1608 aa6.7□□□□□ -1.34
HMG20A-204ENST00000558288 RRP1P56182 461 aaKnown RBP6.7□□□□□ -1.34
HMG20A-204ENST00000558288 NBPF8Q3BBV2 869 aa6.7□□□□□ -1.34
HMG20A-204ENST00000558288 BACH2Q9BYV9 841 aa6.7□□□□□ -1.34
HMG20A-204ENST00000558288 SPAG9O60271 1321 aaKnown RBP6.7□□□□□ -1.34
HMG20A-204ENST00000558288 RNF123Q5XPI4 1314 aa6.7□□□□□ -1.34
HMG20A-204ENST00000558288 NUP153P49790 1475 aaKnown RBP6.69□□□□□ -1.34
HMG20A-204ENST00000558288 LMTK3Q96Q04 1460 aa6.69□□□□□ -1.34
HMG20A-204ENST00000558288 CASKIN1Q8WXD9 1431 aa6.69□□□□□ -1.34
HMG20A-204ENST00000558288 RAPGEF6Q8TEU7 1601 aa6.69□□□□□ -1.34
HMG20A-204ENST00000558288 FRAT1Q92837 279 aaPredicted RBP6.69□□□□□ -1.34
HMG20A-204ENST00000558288 NFKBIBQ15653 356 aa6.69□□□□□ -1.34
HMG20A-204ENST00000558288 PPRC1Q5VV67 1664 aaKnown RBP6.69□□□□□ -1.34
HMG20A-204ENST00000558288 SKAP1Q86WV1 359 aa6.68□□□□□ -1.34
HMG20A-204ENST00000558288 STAG3Q9UJ98 1225 aa6.68□□□□□ -1.34
HMG20A-204ENST00000558288 RCAN3Q9UKA8 241 aa6.68□□□□□ -1.34
HMG20A-204ENST00000558288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.68□□□□□ -1.34
HMG20A-204ENST00000558288 NEO1Q92859 1461 aa6.67□□□□□ -1.34
HMG20A-204ENST00000558288 MYOM3Q5VTT5 1437 aa6.67□□□□□ -1.34
HMG20A-204ENST00000558288 MS4A1P11836 297 aa6.67□□□□□ -1.34
HMG20A-204ENST00000558288 KIF3BO15066 747 aa6.67□□□□□ -1.34
HMG20A-204ENST00000558288 NCKAP5LQ9HCH0 1330 aa6.66□□□□□ -1.34
HMG20A-204ENST00000558288 UHRF1BP1Q6BDS2 1440 aa6.66□□□□□ -1.34
HMG20A-204ENST00000558288 MADDQ8WXG6 1647 aa6.66□□□□□ -1.34
HMG20A-204ENST00000558288 PNISRQ8TF01 805 aaKnown RBP6.66□□□□□ -1.34
HMG20A-204ENST00000558288 RIMS1Q86UR5 1692 aaKnown RBP6.66□□□□□ -1.34
HMG20A-204ENST00000558288 PLIN1O60240 522 aa6.66□□□□□ -1.34
HMG20A-204ENST00000558288 SLC4A1APQ9BWU0 796 aaKnown RBP6.66□□□□□ -1.34
HMG20A-204ENST00000558288 ARAP3Q8WWN8 1544 aa6.66□□□□□ -1.34
HMG20A-204ENST00000558288 ZFYVE16Q7Z3T8 1539 aa6.65□□□□□ -1.34
HMG20A-204ENST00000558288 TSPY4P0CV99 314 aa6.65□□□□□ -1.35
HMG20A-204ENST00000558288 TSPY10P0CW01 314 aa6.65□□□□□ -1.35
HMG20A-204ENST00000558288 RSPH6AQ9H0K4 717 aa6.64□□□□□ -1.35
HMG20A-204ENST00000558288 DHX29Q7Z478 1369 aaKnown RBP6.64□□□□□ -1.35
HMG20A-204ENST00000558288 EFCAB5A4FU69 1503 aa6.63□□□□□ -1.35
HMG20A-204ENST00000558288 PLCH2O75038 1416 aa6.63□□□□□ -1.35
HMG20A-204ENST00000558288 ZNF644Q9H582 1327 aaPredicted RBP6.63□□□□□ -1.35
HMG20A-204ENST00000558288 FRAT2O75474 233 aaPredicted RBP6.63□□□□□ -1.35
HMG20A-204ENST00000558288 CRBNQ96SW2 442 aa6.63□□□□□ -1.35
HMG20A-204ENST00000558288 USP47Q96K76 1375 aa6.63□□□□□ -1.35
HMG20A-204ENST00000558288 ARXQ96QS3 562 aa6.63□□□□□ -1.35
HMG20A-204ENST00000558288 HECW1Q76N89 1606 aa6.63□□□□□ -1.35
HMG20A-204ENST00000558288 ATP10AO60312 1499 aa6.63□□□□□ -1.35
HMG20A-204ENST00000558288 ZNF335Q9H4Z2 1342 aaPredicted RBP6.62□□□□□ -1.35
HMG20A-204ENST00000558288 CHGAP10645 457 aaKnown RBP6.62□□□□□ -1.35
HMG20A-204ENST00000558288 CDCA7LQ96GN5 454 aa6.62□□□□□ -1.35
HMG20A-204ENST00000558288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.62□□□□□ -1.35
HMG20A-204ENST00000558288 PPP6R1Q9UPN7 881 aa6.62□□□□□ -1.35
HMG20A-204ENST00000558288 TROQ12816 1431 aaPredicted RBP6.62□□□□□ -1.35
HMG20A-204ENST00000558288 ABCA9Q8IUA7 1624 aa6.62□□□□□ -1.35
HMG20A-204ENST00000558288 C9orf84Q5VXU9 1444 aa6.61□□□□□ -1.35
HMG20A-204ENST00000558288 SUPT6HQ7KZ85 1726 aaKnown RBP6.61□□□□□ -1.35
HMG20A-204ENST00000558288 RGS3P49796 1198 aa6.61□□□□□ -1.35
HMG20A-204ENST00000558288 C14orf37Q86TY3 774 aa6.61□□□□□ -1.35
HMG20A-204ENST00000558288 FAM43AQ8N2R8 423 aa6.61□□□□□ -1.35
HMG20A-204ENST00000558288 SPATA31E1Q6ZUB1 1445 aa6.61□□□□□ -1.35
HMG20A-204ENST00000558288 TTC37Q6PGP7 1564 aa6.61□□□□□ -1.35
HMG20A-204ENST00000558288 MYBBP1AQ9BQG0 1328 aaKnown RBP6.61□□□□□ -1.35
HMG20A-204ENST00000558288 FBXO31Q5XUX0 539 aaPredicted RBP6.61□□□□□ -1.35
HMG20A-204ENST00000558288 ILDR2Q71H61 639 aa6.61□□□□□ -1.35
HMG20A-204ENST00000558288 ANKRD30BQ9BXX2 1392 aa6.61□□□□□ -1.35
HMG20A-204ENST00000558288 KIF15Q9NS87 1388 aa6.61□□□□□ -1.35
HMG20A-204ENST00000558288 RPRD2Q5VT52 1461 aaKnown RBP6.61□□□□□ -1.35
HMG20A-204ENST00000558288 ZNF518AQ6AHZ1 1483 aa6.6□□□□□ -1.35
HMG20A-204ENST00000558288 GLIPR1L2Q4G1C9 344 aa6.6□□□□□ -1.35
HMG20A-204ENST00000558288 CARD11Q9BXL7 1154 aa6.6□□□□□ -1.35
HMG20A-204ENST00000558288 TRAPPC8Q9Y2L5 1435 aa6.6□□□□□ -1.35
HMG20A-204ENST00000558288 DCAF11Q8TEB1 546 aa6.6□□□□□ -1.35
HMG20A-204ENST00000558288 PKNOX2Q96KN3 472 aa6.6□□□□□ -1.35
HMG20A-204ENST00000558288 KDM2AQ9Y2K7 1162 aa6.59□□□□□ -1.35
HMG20A-204ENST00000558288 EHBP1L1Q8N3D4 1523 aa6.59□□□□□ -1.35
HMG20A-204ENST00000558288 MIA2Q96PC5 1412 aa6.59□□□□□ -1.35
HMG20A-204ENST00000558288 PDE3BQ13370 1112 aa6.59□□□□□ -1.35
HMG20A-204ENST00000558288 KIF14Q15058 1648 aa6.59□□□□□ -1.35
HMG20A-204ENST00000558288 BRD4O60885 1362 aaPredicted RBP6.59□□□□□ -1.35
HMG20A-204ENST00000558288 TOM1O60784 492 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms