RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 VPS8Q8N3P4 1428 aa10.75□□□□□ -0.69
MARK3-212ENST00000558223 EFCAB3Q8N7B9 438 aa10.75□□□□□ -0.69
MARK3-212ENST00000558223 NECTIN2Q92692 538 aa10.75□□□□□ -0.69
MARK3-212ENST00000558223 L3MBTL3Q96JM7 780 aaPredicted RBP10.75□□□□□ -0.69
MARK3-212ENST00000558223 KDM4CQ9H3R0 1056 aa10.75□□□□□ -0.69
MARK3-212ENST00000558223 RAPGEF2Q9Y4G8 1499 aa10.74□□□□□ -0.69
MARK3-212ENST00000558223 LAMC3Q9Y6N6 1575 aa10.74□□□□□ -0.69
MARK3-212ENST00000558223 KRI1Q8N9T8 703 aaKnown RBP10.74□□□□□ -0.69
MARK3-212ENST00000558223 FANCD2Q9BXW9 1451 aa10.74□□□□□ -0.69
MARK3-212ENST00000558223 PDS5BQ9NTI5 1447 aa10.72□□□□□ -0.69
MARK3-212ENST00000558223 SNPHO15079 494 aa10.71□□□□□ -0.69
MARK3-212ENST00000558223 TMEM121BQ9BXQ6 578 aaPredicted RBP10.7□□□□□ -0.7
MARK3-212ENST00000558223 DNMBPQ6XZF7 1577 aa10.69□□□□□ -0.7
MARK3-212ENST00000558223 IGF1RP08069 1367 aa10.69□□□□□ -0.7
MARK3-212ENST00000558223 FLIIQ13045 1269 aa10.69□□□□□ -0.7
MARK3-212ENST00000558223 MARVELD3Q96A59 401 aa10.69□□□□□ -0.7
MARK3-212ENST00000558223 CUX2O14529 1486 aa10.68□□□□□ -0.7
MARK3-212ENST00000558223 KCTD17Q8N5Z5 321 aa10.68□□□□□ -0.7
MARK3-212ENST00000558223 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
MARK3-212ENST00000558223 CARMIL1Q5VZK9 1371 aa10.67□□□□□ -0.7
MARK3-212ENST00000558223 C3orf67Q6ZVT6 689 aa10.67□□□□□ -0.7
MARK3-212ENST00000558223 BOLA1Q9Y3E2 137 aa10.66□□□□□ -0.7
MARK3-212ENST00000558223 ABCA10Q8WWZ4 1543 aa10.66□□□□□ -0.7
MARK3-212ENST00000558223 CCDC82Q8N4S0 544 aa10.65□□□□□ -0.7
MARK3-212ENST00000558223 TOPBP1Q92547 1522 aa10.63□□□□□ -0.71
MARK3-212ENST00000558223 SOX12O15370 315 aa10.63□□□□□ -0.71
MARK3-212ENST00000558223 RAD21O60216 631 aa10.63□□□□□ -0.71
MARK3-212ENST00000558223 PDE4DQ08499 809 aa10.63□□□□□ -0.71
MARK3-212ENST00000558223 ZNF316A6NFI3 1004 aaPredicted RBP10.62□□□□□ -0.71
MARK3-212ENST00000558223 SPNS2Q8IVW8 549 aa10.62□□□□□ -0.71
MARK3-212ENST00000558223 TRIM66O15016 1216 aa10.61□□□□□ -0.71
MARK3-212ENST00000558223 MS4A4AQ96JQ5 239 aa10.61□□□□□ -0.71
MARK3-212ENST00000558223 PHF8Q9UPP1 1060 aa10.61□□□□□ -0.71
MARK3-212ENST00000558223 MAP3K1Q13233 1512 aa10.61□□□□□ -0.71
MARK3-212ENST00000558223 MMRN1Q13201 1228 aa10.6□□□□□ -0.71
MARK3-212ENST00000558223 GPIHBP1Q8IV16 184 aa10.6□□□□□ -0.71
MARK3-212ENST00000558223 CCER1Q8TC90 406 aaPredicted RBP10.6□□□□□ -0.71
MARK3-212ENST00000558223 FHAD1B1AJZ9 1412 aa10.59□□□□□ -0.71
MARK3-212ENST00000558223 G3V3G9 751 aa10.59□□□□□ -0.71
MARK3-212ENST00000558223 POLA1P09884 1462 aaPredicted RBP10.59□□□□□ -0.71
MARK3-212ENST00000558223 PPARGC1BQ86YN6 1023 aaKnown RBP10.58□□□□□ -0.72
MARK3-212ENST00000558223 TRAIPQ9BWF2 469 aa10.58□□□□□ -0.72
MARK3-212ENST00000558223 CUL7Q14999 1698 aa10.57□□□□□ -0.72
MARK3-212ENST00000558223 ARAP1Q96P48 1450 aa10.57□□□□□ -0.72
MARK3-212ENST00000558223 POTEB3A0JP26 581 aa10.57□□□□□ -0.72
MARK3-212ENST00000558223 POTEBQ6S5H4 581 aa10.57□□□□□ -0.72
MARK3-212ENST00000558223 AEBP1Q8IUX7 1158 aa10.57□□□□□ -0.72
MARK3-212ENST00000558223 TRAK2O60296 914 aa10.56□□□□□ -0.72
MARK3-212ENST00000558223 EMP3P54852 163 aa10.56□□□□□ -0.72
MARK3-212ENST00000558223 A6NJR5 290 aa10.55□□□□□ -0.72
MARK3-212ENST00000558223 FAM117AQ9C073 453 aa10.55□□□□□ -0.72
MARK3-212ENST00000558223 CLSPNQ9HAW4 1339 aa10.55□□□□□ -0.72
MARK3-212ENST00000558223 ARHGAP35Q9NRY4 1499 aa10.55□□□□□ -0.72
MARK3-212ENST00000558223 EFCAB5A4FU69 1503 aa10.54□□□□□ -0.72
MARK3-212ENST00000558223 MICALL2Q8IY33 904 aa10.54□□□□□ -0.72
MARK3-212ENST00000558223 NESP48681 1621 aa10.54□□□□□ -0.72
MARK3-212ENST00000558223 FBXO22Q8NEZ5 403 aa10.53□□□□□ -0.72
MARK3-212ENST00000558223 DDRGK1Q96HY6 314 aa10.53□□□□□ -0.72
MARK3-212ENST00000558223 URB2Q14146 1524 aaKnown RBP10.53□□□□□ -0.72
MARK3-212ENST00000558223 RBM26Q5T8P6 1007 aaKnown RBP10.52□□□□□ -0.73
MARK3-212ENST00000558223 HS3ST6Q96QI5 342 aa10.52□□□□□ -0.73
MARK3-212ENST00000558223 FAM205CA6NFA0 338 aa10.51□□□□□ -0.73
MARK3-212ENST00000558223 NLRP6P59044 892 aa10.51□□□□□ -0.73
MARK3-212ENST00000558223 TMCO4Q5TGY1 634 aa10.51□□□□□ -0.73
MARK3-212ENST00000558223 TMEM92Q6UXU6 159 aa10.51□□□□□ -0.73
MARK3-212ENST00000558223 MFRPQ9BY79 579 aa10.51□□□□□ -0.73
MARK3-212ENST00000558223 AQRO60306 1485 aaKnown RBP eCLIP10.5□□□□□ -0.732e-6■■■■□ 25.8
MARK3-212ENST00000558223 GAPVD1Q14C86 1478 aa10.5□□□□□ -0.73
MARK3-212ENST00000558223 RAD54L2Q9Y4B4 1467 aa10.5□□□□□ -0.73
MARK3-212ENST00000558223 RGS22Q8NE09 1264 aa10.5□□□□□ -0.73
MARK3-212ENST00000558223 CLUAP1Q96AJ1 413 aa10.5□□□□□ -0.73
MARK3-212ENST00000558223 KRTAP3-3Q9BYR6 98 aa10.5□□□□□ -0.73
MARK3-212ENST00000558223 KRTAP3-2Q9BYR7 98 aa10.5□□□□□ -0.73
MARK3-212ENST00000558223 WDR97A6NE52 1622 aa10.5□□□□□ -0.73
MARK3-212ENST00000558223 HOXB3P14651 431 aaPredicted RBP10.49□□□□□ -0.73
MARK3-212ENST00000558223 FMN1Q68DA7 1419 aa10.49□□□□□ -0.73
MARK3-212ENST00000558223 RRBP1Q9P2E9 1410 aaKnown RBP10.49□□□□□ -0.73
MARK3-212ENST00000558223 MRC2Q9UBG0 1479 aa10.49□□□□□ -0.73
MARK3-212ENST00000558223 MYT1Q01538 1121 aa10.48□□□□□ -0.73
MARK3-212ENST00000558223 MTMR7Q9Y216 660 aa10.48□□□□□ -0.73
MARK3-212ENST00000558223 IGSF3O75054 1194 aa10.46□□□□□ -0.73
MARK3-212ENST00000558223 ARIH1Q9Y4X5 557 aaPredicted RBP10.46□□□□□ -0.73
MARK3-212ENST00000558223 ABCA5Q8WWZ7 1642 aa10.46□□□□□ -0.74
MARK3-212ENST00000558223 IFT140Q96RY7 1462 aa10.45□□□□□ -0.74
MARK3-212ENST00000558223 PLEKHG3A1L390 1219 aa10.45□□□□□ -0.74
MARK3-212ENST00000558223 CCDC97Q96F63 343 aaPredicted RBP10.45□□□□□ -0.74
MARK3-212ENST00000558223 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
MARK3-212ENST00000558223 FYCO1Q9BQS8 1478 aa10.44□□□□□ -0.74
MARK3-212ENST00000558223 CASKIN1Q8WXD9 1431 aa10.44□□□□□ -0.74
MARK3-212ENST00000558223 CCNB3Q8WWL7 1395 aa10.44□□□□□ -0.74
MARK3-212ENST00000558223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.44□□□□□ -0.74
MARK3-212ENST00000558223 TTBK1Q5TCY1 1321 aaPredicted RBP10.44□□□□□ -0.74
MARK3-212ENST00000558223 ONECUT3O60422 494 aaPredicted RBP10.44□□□□□ -0.74
MARK3-212ENST00000558223 PPP1R37O75864 691 aa10.44□□□□□ -0.74
MARK3-212ENST00000558223 HMGB1P09429 215 aaKnown RBP10.44□□□□□ -0.74
MARK3-212ENST00000558223 PDE4AP27815 886 aa10.44□□□□□ -0.74
MARK3-212ENST00000558223 RBM25P49756 843 aaKnown RBP10.44□□□□□ -0.74
MARK3-212ENST00000558223 SERPINA10Q9UK55 444 aa10.44□□□□□ -0.74
MARK3-212ENST00000558223 MFAP1P55081 439 aaKnown RBP10.43□□□□□ -0.74
MARK3-212ENST00000558223 TDRD9Q8NDG6 1382 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms