RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 FAM135AQ9P2D6 1515 aa21.34■■□□□ 1.01
SNRPA1-204ENST00000558020 MYOM3Q5VTT5 1437 aa21.33■■□□□ 1.01
SNRPA1-204ENST00000558020 MYO3AQ8NEV4 1616 aa21.32■■□□□ 1
SNRPA1-204ENST00000558020 PLA2R1Q13018 1463 aa21.32■■□□□ 1
SNRPA1-204ENST00000558020 CEP170BQ9Y4F5 1589 aaPredicted RBP21.31■■□□□ 1
SNRPA1-204ENST00000558020 KDM5DQ9BY66 1539 aa21.31■■□□□ 1
SNRPA1-204ENST00000558020 FBXO31Q5XUX0 539 aaPredicted RBP21.3■■□□□ 1
SNRPA1-204ENST00000558020 TNRQ92752 1358 aa21.3■■□□□ 1
SNRPA1-204ENST00000558020 ZNF142P52746 1687 aaPredicted RBP21.3■■□□□ 1
SNRPA1-204ENST00000558020 A2ML1A8K2U0 1454 aa21.29■■□□□ 1
SNRPA1-204ENST00000558020 PZPP20742 1482 aa21.27■■□□□ 1
SNRPA1-204ENST00000558020 MAST1Q9Y2H9 1570 aa21.27■□□□□ 0.99
SNRPA1-204ENST00000558020 THEMISQ8N1K5 641 aaPredicted RBP21.26■□□□□ 0.99
SNRPA1-204ENST00000558020 TCOF1Q13428 1488 aaKnown RBP21.25■□□□□ 0.99
SNRPA1-204ENST00000558020 IQSEC2Q5JU85 1478 aa21.25■□□□□ 0.99
SNRPA1-204ENST00000558020 LTBP4Q8N2S1 1624 aa21.24■□□□□ 0.99
SNRPA1-204ENST00000558020 ANKLE2Q86XL3 938 aa21.22■□□□□ 0.99
SNRPA1-204ENST00000558020 DNMT1P26358 1616 aaKnown RBP21.22■□□□□ 0.99
SNRPA1-204ENST00000558020 ZNF335Q9H4Z2 1342 aaPredicted RBP21.21■□□□□ 0.99
SNRPA1-204ENST00000558020 NLRP1Q9C000 1473 aa21.2■□□□□ 0.98
SNRPA1-204ENST00000558020 EIF2AK4Q9P2K8 1649 aaKnown RBP21.19■□□□□ 0.98
SNRPA1-204ENST00000558020 DUOX2Q9NRD8 1548 aa21.19■□□□□ 0.98
SNRPA1-204ENST00000558020 RNF17Q9BXT8 1623 aaKnown RBP21.18■□□□□ 0.98
SNRPA1-204ENST00000558020 RRP7BPQ9NSQ0 103 aa21.18■□□□□ 0.98
SNRPA1-204ENST00000558020 ZC3H13Q5T200 1668 aaKnown RBP21.16■□□□□ 0.98
SNRPA1-204ENST00000558020 KIF15Q9NS87 1388 aa21.16■□□□□ 0.98
SNRPA1-204ENST00000558020 ABCC3O15438 1527 aa21.15■□□□□ 0.98
SNRPA1-204ENST00000558020 PTPN23Q9H3S7 1636 aa21.15■□□□□ 0.98
SNRPA1-204ENST00000558020 SHANK2Q9UPX8 1470 aa21.14■□□□□ 0.98
SNRPA1-204ENST00000558020 ABCC5O15440 1437 aa21.14■□□□□ 0.98
SNRPA1-204ENST00000558020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.14■□□□□ 0.98
SNRPA1-204ENST00000558020 UBAP1LF5GYI3 381 aa21.14■□□□□ 0.97
SNRPA1-204ENST00000558020 UGGT1Q9NYU2 1555 aa21.14■□□□□ 0.97
SNRPA1-204ENST00000558020 FGD6Q6ZV73 1430 aa21.12■□□□□ 0.97
SNRPA1-204ENST00000558020 ERBINQ96RT1 1412 aa21.12■□□□□ 0.97
SNRPA1-204ENST00000558020 KANK1Q14678 1352 aa21.11■□□□□ 0.97
SNRPA1-204ENST00000558020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.11■□□□□ 0.972e-7■□□□□ 8
SNRPA1-204ENST00000558020 DAPK1P53355 1430 aa21.11■□□□□ 0.97
SNRPA1-204ENST00000558020 ANKRD30AQ9BXX3 1397 aa21.1■□□□□ 0.97
SNRPA1-204ENST00000558020 POLR1AO95602 1720 aaPredicted RBP21.1■□□□□ 0.97
SNRPA1-204ENST00000558020 CHIC2Q9UKJ5 165 aa21.09■□□□□ 0.97
SNRPA1-204ENST00000558020 SPATA31D1Q6ZQQ2 1576 aa21.08■□□□□ 0.97
SNRPA1-204ENST00000558020 ERVK-7P63135 1459 aa21.07■□□□□ 0.96
SNRPA1-204ENST00000558020 CROCC2H7BZ55 1655 aa21.07■□□□□ 0.96
SNRPA1-204ENST00000558020 MROH1Q8NDA8 1641 aa21.06■□□□□ 0.96
SNRPA1-204ENST00000558020 NPHP4O75161 1426 aaPredicted RBP21.05■□□□□ 0.96
SNRPA1-204ENST00000558020 ARHGAP31Q2M1Z3 1444 aa21.05■□□□□ 0.96
SNRPA1-204ENST00000558020 CPS1P31327 1500 aa21.05■□□□□ 0.96
SNRPA1-204ENST00000558020 FAM50AQ14320 339 aaKnown RBP21.05■□□□□ 0.96
SNRPA1-204ENST00000558020 MED14O60244 1454 aa21.05■□□□□ 0.96
SNRPA1-204ENST00000558020 NEURL4Q96JN8 1562 aa21.05■□□□□ 0.96
SNRPA1-204ENST00000558020 DEPDC5O75140 1603 aa21.04■□□□□ 0.96
SNRPA1-204ENST00000558020 TOM1O60784 492 aa21.04■□□□□ 0.96
SNRPA1-204ENST00000558020 DISP3Q9P2K9 1392 aa21.04■□□□□ 0.96
SNRPA1-204ENST00000558020 CFAP65Q6ZU64 1925 aaKnown RBP21.04■□□□□ 0.96
SNRPA1-204ENST00000558020 CEP152O94986 1710 aa21.04■□□□□ 0.96
SNRPA1-204ENST00000558020 PRDM15P57071 1507 aaPredicted RBP21.03■□□□□ 0.96
SNRPA1-204ENST00000558020 STAG3Q9UJ98 1225 aa21.01■□□□□ 0.95
SNRPA1-204ENST00000558020 EID1Q9Y6B2 187 aa21.01■□□□□ 0.95
SNRPA1-204ENST00000558020 TXNDC2Q86VQ3 553 aa20.99■□□□□ 0.95
SNRPA1-204ENST00000558020 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
SNRPA1-204ENST00000558020 IQGAP1P46940 1657 aa20.97■□□□□ 0.95
SNRPA1-204ENST00000558020 PIP4K2BP78356 416 aa20.95■□□□□ 0.94
SNRPA1-204ENST00000558020 UBR1Q8IWV7 1749 aa20.95■□□□□ 0.94
SNRPA1-204ENST00000558020 SCAF11Q99590 1463 aaKnown RBP20.94■□□□□ 0.94
SNRPA1-204ENST00000558020 VWDEQ8N2E2 1590 aa20.94■□□□□ 0.94
SNRPA1-204ENST00000558020 ADGRL2O95490 1459 aa20.94■□□□□ 0.94
SNRPA1-204ENST00000558020 LMTK2Q8IWU2 1503 aa20.93■□□□□ 0.94
SNRPA1-204ENST00000558020 LTKP29376 864 aa20.92■□□□□ 0.94
SNRPA1-204ENST00000558020 IDI1Q13907 227 aa20.92■□□□□ 0.94
SNRPA1-204ENST00000558020 SLC52A1Q9NWF4 448 aa20.92■□□□□ 0.94
SNRPA1-204ENST00000558020 SLIT1O75093 1534 aa20.91■□□□□ 0.94
SNRPA1-204ENST00000558020 ANKRD50Q9ULJ7 1429 aa20.91■□□□□ 0.94
SNRPA1-204ENST00000558020 ARHGAP23Q9P227 1491 aa20.9■□□□□ 0.94
SNRPA1-204ENST00000558020 TMEM2Q9UHN6 1383 aa20.89■□□□□ 0.93
SNRPA1-204ENST00000558020 PIK3C2BO00750 1634 aa20.86■□□□□ 0.93
SNRPA1-204ENST00000558020 HSPA1LP34931 641 aa20.86■□□□□ 0.93
SNRPA1-204ENST00000558020 EFCAB6Q5THR3 1501 aa20.85■□□□□ 0.93
SNRPA1-204ENST00000558020 HDGFP51858 240 aaKnown RBP20.85■□□□□ 0.93
SNRPA1-204ENST00000558020 KDM5AP29375 1690 aaKnown RBP20.85■□□□□ 0.93
SNRPA1-204ENST00000558020 RPRD2Q5VT52 1461 aaKnown RBP20.84■□□□□ 0.93
SNRPA1-204ENST00000558020 ILDR2Q71H61 639 aa20.84■□□□□ 0.93
SNRPA1-204ENST00000558020 NOS1P29475 1434 aa20.84■□□□□ 0.93
SNRPA1-204ENST00000558020 LRRC7Q96NW7 1537 aa20.83■□□□□ 0.93
SNRPA1-204ENST00000558020 BCANQ96GW7 911 aa20.82■□□□□ 0.92
SNRPA1-204ENST00000558020 ROCK1Q13464 1354 aa20.82■□□□□ 0.92
SNRPA1-204ENST00000558020 SYNMO15061 1565 aa20.81■□□□□ 0.92
SNRPA1-204ENST00000558020 SOCS7O14512 581 aa20.8■□□□□ 0.92
SNRPA1-204ENST00000558020 STRCP1A6NGW2 1772 aa20.79■□□□□ 0.92
SNRPA1-204ENST00000558020 ITGAEP38570 1179 aa20.78■□□□□ 0.92
SNRPA1-204ENST00000558020 KCNA6P17658 529 aa20.77■□□□□ 0.92
SNRPA1-204ENST00000558020 SLC26A8Q96RN1 970 aa20.77■□□□□ 0.92
SNRPA1-204ENST00000558020 ADGRB3O60242 1522 aa20.76■□□□□ 0.91
SNRPA1-204ENST00000558020 TET3O43151 1660 aa20.76■□□□□ 0.91
SNRPA1-204ENST00000558020 PPP1R15AO75807 674 aaPredicted RBP20.75■□□□□ 0.91
SNRPA1-204ENST00000558020 PPARGC1BQ86YN6 1023 aaKnown RBP20.75■□□□□ 0.91
SNRPA1-204ENST00000558020 PROSER2Q86WR7 435 aaPredicted RBP20.74■□□□□ 0.91
SNRPA1-204ENST00000558020 CHGAP10645 457 aaKnown RBP20.73■□□□□ 0.91
SNRPA1-204ENST00000558020 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.73■□□□□ 0.91
SNRPA1-204ENST00000558020 NUP155O75694 1391 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 432.7 ms