RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SETD5Q9C0A6 1442 aa31.8■■■□□ 2.68
CASC4-204ENST00000557945 PPP6R1Q9UPN7 881 aa31.77■■■□□ 2.68
CASC4-204ENST00000557945 ADAMTSL3P82987 1691 aa31.76■■■□□ 2.68
CASC4-204ENST00000557945 KDM4FA0A1W2PPD8 638 aa31.76■■■□□ 2.67
CASC4-204ENST00000557945 WASHC2CQ9Y4E1 1318 aa31.76■■■□□ 2.67
CASC4-204ENST00000557945 KANK1Q14678 1352 aa31.75■■■□□ 2.67
CASC4-204ENST00000557945 MROH1Q8NDA8 1641 aa31.74■■■□□ 2.67
CASC4-204ENST00000557945 DEPDC5O75140 1603 aa31.74■■■□□ 2.67
CASC4-204ENST00000557945 MADDQ8WXG6 1647 aa31.74■■■□□ 2.67
CASC4-204ENST00000557945 FER1L4A9Z1Z3 1794 aa31.72■■■□□ 2.67
CASC4-204ENST00000557945 PRDM15P57071 1507 aaPredicted RBP31.72■■■□□ 2.67
CASC4-204ENST00000557945 TRIM52Q96A61 297 aa31.71■■■□□ 2.67
CASC4-204ENST00000557945 PCGF6Q9BYE7 350 aa31.71■■■□□ 2.67
CASC4-204ENST00000557945 RAB3GAP2Q9H2M9 1393 aa31.71■■■□□ 2.67
CASC4-204ENST00000557945 NUP155O75694 1391 aa31.69■■■□□ 2.66
CASC4-204ENST00000557945 UNC13BO14795 1591 aa31.69■■■□□ 2.66
CASC4-204ENST00000557945 KDM5DQ9BY66 1539 aa31.68■■■□□ 2.66
CASC4-204ENST00000557945 CNTLNQ9NXG0 1405 aa31.68■■■□□ 2.66
CASC4-204ENST00000557945 RIMS1Q86UR5 1692 aaKnown RBP31.67■■■□□ 2.66
CASC4-204ENST00000557945 CLTCQ00610 1675 aaKnown RBP31.66■■■□□ 2.66
CASC4-204ENST00000557945 ABCC3O15438 1527 aa31.65■■■□□ 2.66
CASC4-204ENST00000557945 PLPPR3Q6T4P5 718 aa31.65■■■□□ 2.66
CASC4-204ENST00000557945 FAM135AQ9P2D6 1515 aa31.65■■■□□ 2.66
CASC4-204ENST00000557945 VWDEQ8N2E2 1590 aa31.62■■■□□ 2.65
CASC4-204ENST00000557945 CEP152O94986 1710 aa31.62■■■□□ 2.65
CASC4-204ENST00000557945 ZMYM3Q14202 1370 aa31.61■■■□□ 2.65
CASC4-204ENST00000557945 ZC3H13Q5T200 1668 aaKnown RBP31.61■■■□□ 2.65
CASC4-204ENST00000557945 ACIN1Q9UKV3 1341 aaKnown RBP31.6■■■□□ 2.65
CASC4-204ENST00000557945 PTPRMP28827 1452 aa31.59■■■□□ 2.65
CASC4-204ENST00000557945 CEBPAP49715 358 aaPredicted RBP31.58■■■□□ 2.65
CASC4-204ENST00000557945 HRCP23327 699 aa31.57■■■□□ 2.64
CASC4-204ENST00000557945 IQGAP3Q86VI3 1631 aa31.57■■■□□ 2.64
CASC4-204ENST00000557945 MROH2AA6NES4 1674 aa31.56■■■□□ 2.64
CASC4-204ENST00000557945 LMTK2Q8IWU2 1503 aa31.56■■■□□ 2.64
CASC4-204ENST00000557945 CAMSAP1Q5T5Y3 1602 aa31.54■■■□□ 2.64
CASC4-204ENST00000557945 SLC4A1APQ9BWU0 796 aaKnown RBP31.52■■■□□ 2.64
CASC4-204ENST00000557945 C3P01024 1663 aa31.5■■■□□ 2.63
CASC4-204ENST00000557945 PZPP20742 1482 aa31.5■■■□□ 2.63
CASC4-204ENST00000557945 TET3O43151 1660 aa31.49■■■□□ 2.63
CASC4-204ENST00000557945 EFCAB6Q5THR3 1501 aa31.48■■■□□ 2.63
CASC4-204ENST00000557945 MPHOSPH9Q99550 1183 aa31.47■■■□□ 2.63
CASC4-204ENST00000557945 ARHGAP31Q2M1Z3 1444 aa31.47■■■□□ 2.63
CASC4-204ENST00000557945 FBXO31Q5XUX0 539 aaPredicted RBP31.46■■■□□ 2.63
CASC4-204ENST00000557945 NPATQ14207 1427 aa31.46■■■□□ 2.63
CASC4-204ENST00000557945 PKD2Q13563 968 aa31.43■■■□□ 2.62
CASC4-204ENST00000557945 RPRD2Q5VT52 1461 aaKnown RBP31.4■■■□□ 2.62
CASC4-204ENST00000557945 CFAP65Q6ZU64 1925 aaKnown RBP31.4■■■□□ 2.62
CASC4-204ENST00000557945 E9PCH4 1651 aa31.39■■■□□ 2.62
CASC4-204ENST00000557945 ERVK-7P63135 1459 aa31.38■■■□□ 2.61
CASC4-204ENST00000557945 FOXD1Q16676 465 aa31.36■■■□□ 2.61
CASC4-204ENST00000557945 AEBP2Q6ZN18 517 aaPredicted RBP31.36■■■□□ 2.61
CASC4-204ENST00000557945 TNRQ92752 1358 aa31.35■■■□□ 2.61
CASC4-204ENST00000557945 PREX1Q8TCU6 1659 aa31.34■■■□□ 2.61
CASC4-204ENST00000557945 SPATA31D1Q6ZQQ2 1576 aa31.32■■■□□ 2.61
CASC4-204ENST00000557945 NOS1P29475 1434 aa31.3■■■□□ 2.6
CASC4-204ENST00000557945 SETD1BQ9UPS6 1966 aaKnown RBP31.26■■■□□ 2.59
CASC4-204ENST00000557945 SYNMO15061 1565 aa31.24■■■□□ 2.59
CASC4-204ENST00000557945 PTPRTO14522 1441 aa31.24■■■□□ 2.59
CASC4-204ENST00000557945 SPHKAPQ2M3C7 1700 aa31.23■■■□□ 2.59
CASC4-204ENST00000557945 UHRF1BP1Q6BDS2 1440 aa31.22■■■□□ 2.59
CASC4-204ENST00000557945 DHX57Q6P158 1386 aaKnown RBP31.2■■■□□ 2.59
CASC4-204ENST00000557945 SLC52A1Q9NWF4 448 aa31.2■■■□□ 2.59
CASC4-204ENST00000557945 MYO3AQ8NEV4 1616 aa31.2■■■□□ 2.58
CASC4-204ENST00000557945 PLA2R1Q13018 1463 aa31.2■■■□□ 2.58
CASC4-204ENST00000557945 NLRP1Q9C000 1473 aa31.2■■■□□ 2.58
CASC4-204ENST00000557945 IDI1Q13907 227 aa31.19■■■□□ 2.58
CASC4-204ENST00000557945 UGGT1Q9NYU2 1555 aa31.17■■■□□ 2.58
CASC4-204ENST00000557945 TRPM2O94759 1503 aa31.17■■■□□ 2.58
CASC4-204ENST00000557945 STAG3Q9UJ98 1225 aa31.15■■■□□ 2.58
CASC4-204ENST00000557945 A2ML1A8K2U0 1454 aa31.14■■■□□ 2.58
CASC4-204ENST00000557945 CHGAP10645 457 aaKnown RBP31.13■■■□□ 2.57
CASC4-204ENST00000557945 ANKRD30BQ9BXX2 1392 aa31.13■■■□□ 2.57
CASC4-204ENST00000557945 CEP170BQ9Y4F5 1589 aaPredicted RBP31.12■■■□□ 2.57
CASC4-204ENST00000557945 CCDC144AA2RUR9 1427 aa31.11■■■□□ 2.57
CASC4-204ENST00000557945 PIK3C2BO00750 1634 aa31.1■■■□□ 2.57
CASC4-204ENST00000557945 CLTCL1P53675 1640 aa31.1■■■□□ 2.57
CASC4-204ENST00000557945 LMTK3Q96Q04 1460 aa31.09■■■□□ 2.57
CASC4-204ENST00000557945 ZNF142P52746 1687 aaPredicted RBP31.08■■■□□ 2.57
CASC4-204ENST00000557945 HSPA2P54652 639 aa31.05■■■□□ 2.56
CASC4-204ENST00000557945 THEMISQ8N1K5 641 aaPredicted RBP31.05■■■□□ 2.56
CASC4-204ENST00000557945 ADGRB3O60242 1522 aa31.03■■■□□ 2.56
CASC4-204ENST00000557945 UBR1Q8IWV7 1749 aa31.01■■■□□ 2.56
CASC4-204ENST00000557945 CCER1Q8TC90 406 aaPredicted RBP30.99■■■□□ 2.55
CASC4-204ENST00000557945 TMEM131LA2VDJ0 1609 aa30.99■■■□□ 2.55
CASC4-204ENST00000557945 ZNF326Q5BKZ1 582 aaKnown RBP30.97■■■□□ 2.55
CASC4-204ENST00000557945 KIF1BO60333 1816 aa30.97■■■□□ 2.55
CASC4-204ENST00000557945 KDM5AP29375 1690 aaKnown RBP30.96■■■□□ 2.55
CASC4-204ENST00000557945 SIN3AQ96ST3 1273 aa30.94■■■□□ 2.54
CASC4-204ENST00000557945 RGL3Q3MIN7 710 aa30.93■■■□□ 2.54
CASC4-204ENST00000557945 MYO5BQ9ULV0 1848 aa30.93■■■□□ 2.54
CASC4-204ENST00000557945 NEUROD1Q13562 356 aa30.92■■■□□ 2.54
CASC4-204ENST00000557945 TMEM2Q9UHN6 1383 aa30.92■■■□□ 2.54
CASC4-204ENST00000557945 SPATA31E1Q6ZUB1 1445 aa30.89■■■□□ 2.54
CASC4-204ENST00000557945 ANKLE2Q86XL3 938 aa30.88■■■□□ 2.53
CASC4-204ENST00000557945 EID1Q9Y6B2 187 aa30.88■■■□□ 2.53
CASC4-204ENST00000557945 TXNDC2Q86VQ3 553 aa30.87■■■□□ 2.53
CASC4-204ENST00000557945 RIMS2Q9UQ26 1411 aa30.86■■■□□ 2.53
CASC4-204ENST00000557945 SLIT1O75093 1534 aa30.86■■■□□ 2.53
CASC4-204ENST00000557945 HDGFP51858 240 aaKnown RBP30.86■■■□□ 2.53
CASC4-204ENST00000557945 ARHGAP23Q9P227 1491 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms