RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 WASHC2CQ9Y4E1 1318 aa16.39■□□□□ 0.21
RDH11-210ENST00000557331 CPS1P31327 1500 aa16.39■□□□□ 0.21
RDH11-210ENST00000557331 TNRQ92752 1358 aa16.38■□□□□ 0.21
RDH11-210ENST00000557331 KIF3BO15066 747 aa16.38■□□□□ 0.21
RDH11-210ENST00000557331 EHBP1L1Q8N3D4 1523 aa16.38■□□□□ 0.21
RDH11-210ENST00000557331 TSPY4P0CV99 314 aa16.37■□□□□ 0.21
RDH11-210ENST00000557331 TSPY10P0CW01 314 aa16.37■□□□□ 0.21
RDH11-210ENST00000557331 ZNF644Q9H582 1327 aaPredicted RBP16.37■□□□□ 0.21
RDH11-210ENST00000557331 PZPP20742 1482 aa16.36■□□□□ 0.21
RDH11-210ENST00000557331 DNMT1P26358 1616 aaKnown RBP16.36■□□□□ 0.21
RDH11-210ENST00000557331 NLRP1Q9C000 1473 aa16.35■□□□□ 0.21
RDH11-210ENST00000557331 CCDC141Q6ZP82 1450 aa16.35■□□□□ 0.21
RDH11-210ENST00000557331 SHANK2Q9UPX8 1470 aa16.35■□□□□ 0.21
RDH11-210ENST00000557331 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
RDH11-210ENST00000557331 KDM5DQ9BY66 1539 aa16.34■□□□□ 0.21
RDH11-210ENST00000557331 MIA2Q96PC5 1412 aa16.33■□□□□ 0.2
RDH11-210ENST00000557331 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
RDH11-210ENST00000557331 FBXO31Q5XUX0 539 aaPredicted RBP16.31■□□□□ 0.2
RDH11-210ENST00000557331 MED14O60244 1454 aa16.3■□□□□ 0.2
RDH11-210ENST00000557331 HSPA1LP34931 641 aa16.3■□□□□ 0.2
RDH11-210ENST00000557331 POLR1AO95602 1720 aaPredicted RBP16.3■□□□□ 0.2
RDH11-210ENST00000557331 PIP4K2BP78356 416 aa16.29■□□□□ 0.2
RDH11-210ENST00000557331 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.27■□□□□ 0.2
RDH11-210ENST00000557331 UGGT1Q9NYU2 1555 aa16.27■□□□□ 0.2
RDH11-210ENST00000557331 NCOA2Q15596 1464 aa16.27■□□□□ 0.19
RDH11-210ENST00000557331 NPHP4O75161 1426 aaPredicted RBP16.27■□□□□ 0.19
RDH11-210ENST00000557331 DEPDC5O75140 1603 aa16.27■□□□□ 0.19
RDH11-210ENST00000557331 ARHGEF5Q12774 1597 aa16.26■□□□□ 0.19
RDH11-210ENST00000557331 CAMSAP2Q08AD1 1489 aa16.26■□□□□ 0.19
RDH11-210ENST00000557331 NEURL4Q96JN8 1562 aa16.26■□□□□ 0.19
RDH11-210ENST00000557331 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
RDH11-210ENST00000557331 VWDEQ8N2E2 1590 aa16.21■□□□□ 0.19
RDH11-210ENST00000557331 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.18
RDH11-210ENST00000557331 ZC3H13Q5T200 1668 aaKnown RBP16.2■□□□□ 0.18
RDH11-210ENST00000557331 RNF17Q9BXT8 1623 aaKnown RBP16.18■□□□□ 0.18
RDH11-210ENST00000557331 IQGAP1P46940 1657 aa16.18■□□□□ 0.18
RDH11-210ENST00000557331 EID1Q9Y6B2 187 aa16.17■□□□□ 0.18
RDH11-210ENST00000557331 ABCC3O15438 1527 aa16.17■□□□□ 0.18
RDH11-210ENST00000557331 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
RDH11-210ENST00000557331 EIF2AK4Q9P2K8 1649 aaKnown RBP16.16■□□□□ 0.18
RDH11-210ENST00000557331 ERVK-7P63135 1459 aa16.15■□□□□ 0.18
RDH11-210ENST00000557331 LRRC7Q96NW7 1537 aa16.14■□□□□ 0.18
RDH11-210ENST00000557331 SYNMO15061 1565 aa16.14■□□□□ 0.17
RDH11-210ENST00000557331 MYOM3Q5VTT5 1437 aa16.14■□□□□ 0.17
RDH11-210ENST00000557331 TXNDC2Q86VQ3 553 aa16.14■□□□□ 0.17
RDH11-210ENST00000557331 LRRC9Q6ZRR7 1453 aa16.14■□□□□ 0.17
RDH11-210ENST00000557331 ARHGAP31Q2M1Z3 1444 aa16.13■□□□□ 0.17
RDH11-210ENST00000557331 SCAF11Q99590 1463 aaKnown RBP16.13■□□□□ 0.17
RDH11-210ENST00000557331 MAP3K1Q13233 1512 aa16.13■□□□□ 0.17
RDH11-210ENST00000557331 DUOX2Q9NRD8 1548 aa16.12■□□□□ 0.17
RDH11-210ENST00000557331 VPS8Q8N3P4 1428 aa16.11■□□□□ 0.17
RDH11-210ENST00000557331 SLIT1O75093 1534 aa16.09■□□□□ 0.17
RDH11-210ENST00000557331 STAG3Q9UJ98 1225 aa16.09■□□□□ 0.17
RDH11-210ENST00000557331 KANK1Q14678 1352 aa16.09■□□□□ 0.17
RDH11-210ENST00000557331 ARHGAP23Q9P227 1491 aa16.09■□□□□ 0.17
RDH11-210ENST00000557331 ALKQ9UM73 1620 aa16.08■□□□□ 0.17
RDH11-210ENST00000557331 ERBINQ96RT1 1412 aa16.08■□□□□ 0.16
RDH11-210ENST00000557331 LTKP29376 864 aa16.07■□□□□ 0.16
RDH11-210ENST00000557331 FAM135BQ49AJ0 1406 aa16.07■□□□□ 0.16
RDH11-210ENST00000557331 UBR1Q8IWV7 1749 aa16.06■□□□□ 0.16
RDH11-210ENST00000557331 KIF15Q9NS87 1388 aa16.06■□□□□ 0.16
RDH11-210ENST00000557331 TMEM2Q9UHN6 1383 aa16.05■□□□□ 0.16
RDH11-210ENST00000557331 APLP2Q06481 763 aa16.05■□□□□ 0.16
RDH11-210ENST00000557331 CFAP65Q6ZU64 1925 aaKnown RBP16.04■□□□□ 0.16
RDH11-210ENST00000557331 MROH1Q8NDA8 1641 aa16.04■□□□□ 0.16
RDH11-210ENST00000557331 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
RDH11-210ENST00000557331 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
RDH11-210ENST00000557331 KCNA6P17658 529 aa16.03■□□□□ 0.16
RDH11-210ENST00000557331 KDM5AP29375 1690 aaKnown RBP16.02■□□□□ 0.16
RDH11-210ENST00000557331 HDGFP51858 240 aaKnown RBP16.02■□□□□ 0.16
RDH11-210ENST00000557331 SLC52A1Q9NWF4 448 aa16.02■□□□□ 0.16
RDH11-210ENST00000557331 KANK4Q5T7N3 995 aaPredicted RBP16.01■□□□□ 0.15
RDH11-210ENST00000557331 RRP7BPQ9NSQ0 103 aa16.01■□□□□ 0.15
RDH11-210ENST00000557331 CEP152O94986 1710 aa16■□□□□ 0.15
RDH11-210ENST00000557331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.15
RDH11-210ENST00000557331 ANKRD30AQ9BXX3 1397 aa16■□□□□ 0.15
RDH11-210ENST00000557331 ABCC5O15440 1437 aa15.99■□□□□ 0.15
RDH11-210ENST00000557331 IDI1Q13907 227 aa15.98■□□□□ 0.15
RDH11-210ENST00000557331 PROSER2Q86WR7 435 aaPredicted RBP15.98■□□□□ 0.15
RDH11-210ENST00000557331 EFCAB6Q5THR3 1501 aa15.98■□□□□ 0.15
RDH11-210ENST00000557331 TMEM94Q12767 1356 aa15.98■□□□□ 0.15
RDH11-210ENST00000557331 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
RDH11-210ENST00000557331 LMTK2Q8IWU2 1503 aa15.97■□□□□ 0.15
RDH11-210ENST00000557331 RGS17Q9UGC6 210 aaPredicted RBP15.96■□□□□ 0.15
RDH11-210ENST00000557331 DAPK1P53355 1430 aa15.94■□□□□ 0.14
RDH11-210ENST00000557331 MSH6P52701 1360 aa15.94■□□□□ 0.14
RDH11-210ENST00000557331 NKTRP30414 1462 aaKnown RBP15.94■□□□□ 0.14
RDH11-210ENST00000557331 PIK3C2BO00750 1634 aa15.94■□□□□ 0.14
RDH11-210ENST00000557331 RPRD2Q5VT52 1461 aaKnown RBP15.92■□□□□ 0.14
RDH11-210ENST00000557331 BCANQ96GW7 911 aa15.92■□□□□ 0.14
RDH11-210ENST00000557331 SLC26A8Q96RN1 970 aa15.92■□□□□ 0.14
RDH11-210ENST00000557331 SLAIN2Q9P270 581 aa15.92■□□□□ 0.14
RDH11-210ENST00000557331 PTPN23Q9H3S7 1636 aa15.92■□□□□ 0.14
RDH11-210ENST00000557331 NOS1P29475 1434 aa15.92■□□□□ 0.14
RDH11-210ENST00000557331 NCOA3Q9Y6Q9 1424 aa15.92■□□□□ 0.14
RDH11-210ENST00000557331 TET3O43151 1660 aa15.92■□□□□ 0.14
RDH11-210ENST00000557331 XIRP1Q702N8 1843 aaKnown RBP15.91■□□□□ 0.14
RDH11-210ENST00000557331 CROCC2H7BZ55 1655 aa15.91■□□□□ 0.14
RDH11-210ENST00000557331 FGD6Q6ZV73 1430 aa15.91■□□□□ 0.14
RDH11-210ENST00000557331 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms