RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 CCDC18Q5T9S5 1454 aa20.73■□□□□ 0.91
PSEN1-219ENST00000556951 MED14O60244 1454 aa20.7■□□□□ 0.9
PSEN1-219ENST00000556951 SYCP2Q9BX26 1530 aa20.7■□□□□ 0.9
PSEN1-219ENST00000556951 GGT6Q6P531 493 aa20.69■□□□□ 0.9
PSEN1-219ENST00000556951 ANKLE2Q86XL3 938 aa20.69■□□□□ 0.9
PSEN1-219ENST00000556951 PLXNC1O60486 1568 aa20.68■□□□□ 0.9
PSEN1-219ENST00000556951 NPHP4O75161 1426 aaPredicted RBP20.68■□□□□ 0.9
PSEN1-219ENST00000556951 FAM135BQ49AJ0 1406 aa20.68■□□□□ 0.9
PSEN1-219ENST00000556951 KIAA1107Q9UPP5 1409 aa20.68■□□□□ 0.9
PSEN1-219ENST00000556951 A2MP01023 1474 aa20.68■□□□□ 0.9
PSEN1-219ENST00000556951 DEPDC5O75140 1603 aa20.67■□□□□ 0.9
PSEN1-219ENST00000556951 ATP7AQ04656 1500 aa20.67■□□□□ 0.9
PSEN1-219ENST00000556951 IQGAP1P46940 1657 aa20.65■□□□□ 0.9
PSEN1-219ENST00000556951 TRIM52Q96A61 297 aa20.65■□□□□ 0.9
PSEN1-219ENST00000556951 INO80Q9ULG1 1556 aaPredicted RBP20.63■□□□□ 0.89
PSEN1-219ENST00000556951 XIRP1Q702N8 1843 aaKnown RBP20.63■□□□□ 0.89
PSEN1-219ENST00000556951 CFDP1Q9UEE9 299 aaPredicted RBP20.63■□□□□ 0.89
PSEN1-219ENST00000556951 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.62■□□□□ 0.89
PSEN1-219ENST00000556951 FYCO1Q9BQS8 1478 aa20.61■□□□□ 0.89
PSEN1-219ENST00000556951 ZNF644Q9H582 1327 aaPredicted RBP20.6■□□□□ 0.89
PSEN1-219ENST00000556951 PLEKHH2Q8IVE3 1493 aa20.59■□□□□ 0.89
PSEN1-219ENST00000556951 FBXO31Q5XUX0 539 aaPredicted RBP20.59■□□□□ 0.89
PSEN1-219ENST00000556951 CCNB3Q8WWL7 1395 aa20.57■□□□□ 0.88
PSEN1-219ENST00000556951 THEMISQ8N1K5 641 aaPredicted RBP20.56■□□□□ 0.88
PSEN1-219ENST00000556951 ROBO1Q9Y6N7 1651 aa20.56■□□□□ 0.88
PSEN1-219ENST00000556951 MBD5Q9P267 1494 aa20.56■□□□□ 0.88
PSEN1-219ENST00000556951 TNRQ92752 1358 aa20.55■□□□□ 0.88
PSEN1-219ENST00000556951 ZNF772Q68DY9 489 aaPredicted RBP20.54■□□□□ 0.88
PSEN1-219ENST00000556951 DHX29Q7Z478 1369 aaKnown RBP20.54■□□□□ 0.88
PSEN1-219ENST00000556951 CDK12Q9NYV4 1490 aaPredicted RBP20.52■□□□□ 0.88
PSEN1-219ENST00000556951 ADGBQ8N7X0 1667 aa20.51■□□□□ 0.87
PSEN1-219ENST00000556951 RTEL1-TNFRSF6BF6WH68 1400 aa20.51■□□□□ 0.87
PSEN1-219ENST00000556951 ZC3H13Q5T200 1668 aaKnown RBP20.5■□□□□ 0.87
PSEN1-219ENST00000556951 UGGT1Q9NYU2 1555 aa20.5■□□□□ 0.87
PSEN1-219ENST00000556951 JCADQ9P266 1359 aa20.49■□□□□ 0.87
PSEN1-219ENST00000556951 RXRBP28702 533 aa20.49■□□□□ 0.87
PSEN1-219ENST00000556951 FAM135AQ9P2D6 1515 aa20.48■□□□□ 0.87
PSEN1-219ENST00000556951 KIF3BO15066 747 aa20.48■□□□□ 0.87
PSEN1-219ENST00000556951 SETBP1Q9Y6X0 1596 aa20.47■□□□□ 0.87
PSEN1-219ENST00000556951 MTUS2Q5JR59 1369 aa20.46■□□□□ 0.87
PSEN1-219ENST00000556951 PZPP20742 1482 aa20.46■□□□□ 0.87
PSEN1-219ENST00000556951 ZRANB1Q9UGI0 708 aa20.46■□□□□ 0.87
PSEN1-219ENST00000556951 PHLPP1O60346 1717 aa20.46■□□□□ 0.87
PSEN1-219ENST00000556951 LRP6O75581 1613 aa20.45■□□□□ 0.86
PSEN1-219ENST00000556951 MIA2Q96PC5 1412 aa20.44■□□□□ 0.86
PSEN1-219ENST00000556951 NLRP1Q9C000 1473 aa20.44■□□□□ 0.86
PSEN1-219ENST00000556951 TIAM1Q13009 1591 aa20.44■□□□□ 0.86
PSEN1-219ENST00000556951 KDM5DQ9BY66 1539 aa20.43■□□□□ 0.86
PSEN1-219ENST00000556951 FOXD1Q16676 465 aa20.42■□□□□ 0.86
PSEN1-219ENST00000556951 WASHC2CQ9Y4E1 1318 aa20.42■□□□□ 0.86
PSEN1-219ENST00000556951 MEX3CQ5U5Q3 659 aaKnown RBP20.4■□□□□ 0.86
PSEN1-219ENST00000556951 LRRC9Q6ZRR7 1453 aa20.39■□□□□ 0.85
PSEN1-219ENST00000556951 SPATA31A6Q5VVP1 1343 aa20.38■□□□□ 0.85
PSEN1-219ENST00000556951 CEP162Q5TB80 1403 aa20.37■□□□□ 0.85
PSEN1-219ENST00000556951 RBM33Q96EV2 1170 aaKnown RBP20.36■□□□□ 0.85
PSEN1-219ENST00000556951 RSPH4AQ5TD94 716 aa20.35■□□□□ 0.85
PSEN1-219ENST00000556951 COL16A1Q07092 1604 aaPredicted RBP20.35■□□□□ 0.85
PSEN1-219ENST00000556951 CCDC141Q6ZP82 1450 aa20.34■□□□□ 0.85
PSEN1-219ENST00000556951 TMEM94Q12767 1356 aa20.33■□□□□ 0.84
PSEN1-219ENST00000556951 EHBP1L1Q8N3D4 1523 aa20.32■□□□□ 0.84
PSEN1-219ENST00000556951 RGS12O14924 1447 aa20.32■□□□□ 0.84
PSEN1-219ENST00000556951 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
PSEN1-219ENST00000556951 MAP3K1Q13233 1512 aa20.3■□□□□ 0.84
PSEN1-219ENST00000556951 CAMSAP2Q08AD1 1489 aa20.3■□□□□ 0.84
PSEN1-219ENST00000556951 SHPRHQ149N8 1683 aa20.28■□□□□ 0.84
PSEN1-219ENST00000556951 NCOA2Q15596 1464 aa20.27■□□□□ 0.84
PSEN1-219ENST00000556951 SCAF11Q99590 1463 aaKnown RBP20.27■□□□□ 0.84
PSEN1-219ENST00000556951 NUTM2BA6NNL0 878 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-219ENST00000556951 NUTM2EB1AL46 878 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-219ENST00000556951 IFFO2Q5TF58 517 aa20.27■□□□□ 0.84
PSEN1-219ENST00000556951 NUTM2DQ5VT03 806 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-219ENST00000556951 NUTM2AQ8IVF1 878 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-219ENST00000556951 LTKP29376 864 aa20.26■□□□□ 0.83
PSEN1-219ENST00000556951 TSPY4P0CV99 314 aa20.25■□□□□ 0.83
PSEN1-219ENST00000556951 TSPY10P0CW01 314 aa20.25■□□□□ 0.83
PSEN1-219ENST00000556951 ABCC3O15438 1527 aa20.25■□□□□ 0.83
PSEN1-219ENST00000556951 SLAIN2Q9P270 581 aa20.24■□□□□ 0.83
PSEN1-219ENST00000556951 ARHGEF5Q12774 1597 aa20.24■□□□□ 0.83
PSEN1-219ENST00000556951 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
PSEN1-219ENST00000556951 ATAD2Q6PL18 1390 aa20.23■□□□□ 0.83
PSEN1-219ENST00000556951 LRP5O75197 1615 aa20.23■□□□□ 0.83
PSEN1-219ENST00000556951 UBR1Q8IWV7 1749 aa20.22■□□□□ 0.83
PSEN1-219ENST00000556951 RBM6P78332 1123 aaKnown RBP20.21■□□□□ 0.83
PSEN1-219ENST00000556951 AFF2P51816 1311 aa20.21■□□□□ 0.83
PSEN1-219ENST00000556951 EP400Q96L91 3159 aa20.19■□□□□ 0.82
PSEN1-219ENST00000556951 TXNDC2Q86VQ3 553 aa20.19■□□□□ 0.82
PSEN1-219ENST00000556951 MROH1Q8NDA8 1641 aa20.19■□□□□ 0.82
PSEN1-219ENST00000556951 ARHGAP23Q9P227 1491 aa20.18■□□□□ 0.82
PSEN1-219ENST00000556951 PROSER2Q86WR7 435 aaPredicted RBP20.18■□□□□ 0.82
PSEN1-219ENST00000556951 KCNA6P17658 529 aa20.16■□□□□ 0.82
PSEN1-219ENST00000556951 MSH6P52701 1360 aa20.16■□□□□ 0.82
PSEN1-219ENST00000556951 SLIT1O75093 1534 aa20.16■□□□□ 0.82
PSEN1-219ENST00000556951 PRDM15P57071 1507 aaPredicted RBP20.16■□□□□ 0.82
PSEN1-219ENST00000556951 CFAP65Q6ZU64 1925 aaKnown RBP20.15■□□□□ 0.82
PSEN1-219ENST00000556951 QTRT2Q9H974 415 aaKnown RBP20.15■□□□□ 0.82
PSEN1-219ENST00000556951 MAST1Q9Y2H9 1570 aa20.15■□□□□ 0.82
PSEN1-219ENST00000556951 AHDC1Q5TGY3 1603 aaPredicted RBP20.13■□□□□ 0.81
PSEN1-219ENST00000556951 EIF2AK4Q9P2K8 1649 aaKnown RBP20.11■□□□□ 0.81
PSEN1-219ENST00000556951 ARHGAP31Q2M1Z3 1444 aa20.1■□□□□ 0.81
PSEN1-219ENST00000556951 CEP152O94986 1710 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms