RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 FAM135AQ9P2D6 1515 aa24.71■■□□□ 1.55
PCNX4-213ENST00000556907 CNTLNQ9NXG0 1405 aa24.69■■□□□ 1.54
PCNX4-213ENST00000556907 MADDQ8WXG6 1647 aa24.68■■□□□ 1.54
PCNX4-213ENST00000556907 RNF17Q9BXT8 1623 aaKnown RBP24.68■■□□□ 1.54
PCNX4-213ENST00000556907 FER1L4A9Z1Z3 1794 aa24.67■■□□□ 1.54
PCNX4-213ENST00000556907 HFM1A2PYH4 1435 aa24.64■■□□□ 1.54
PCNX4-213ENST00000556907 PTPRMP28827 1452 aa24.62■■□□□ 1.53
PCNX4-213ENST00000556907 NAIPQ13075 1403 aa24.61■■□□□ 1.53
PCNX4-213ENST00000556907 DEPDC5O75140 1603 aa24.61■■□□□ 1.53
PCNX4-213ENST00000556907 RIMS1Q86UR5 1692 aaKnown RBP24.61■■□□□ 1.53
PCNX4-213ENST00000556907 WASHC2CQ9Y4E1 1318 aa24.61■■□□□ 1.53
PCNX4-213ENST00000556907 KANK1Q14678 1352 aa24.6■■□□□ 1.53
PCNX4-213ENST00000556907 ACIN1Q9UKV3 1341 aaKnown RBP24.6■■□□□ 1.53
PCNX4-213ENST00000556907 MROH2AA6NES4 1674 aa24.59■■□□□ 1.53
PCNX4-213ENST00000556907 PRDM15P57071 1507 aaPredicted RBP24.59■■□□□ 1.53
PCNX4-213ENST00000556907 KDM5DQ9BY66 1539 aa24.59■■□□□ 1.53
PCNX4-213ENST00000556907 ZC3H13Q5T200 1668 aaKnown RBP24.58■■□□□ 1.53
PCNX4-213ENST00000556907 MROH1Q8NDA8 1641 aa24.57■■□□□ 1.52
PCNX4-213ENST00000556907 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
PCNX4-213ENST00000556907 ZMYM3Q14202 1370 aa24.55■■□□□ 1.52
PCNX4-213ENST00000556907 CLTCQ00610 1675 aaKnown RBP24.55■■□□□ 1.52
PCNX4-213ENST00000556907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.53■■□□□ 1.52
PCNX4-213ENST00000556907 UNC13BO14795 1591 aa24.53■■□□□ 1.52
PCNX4-213ENST00000556907 ABCC3O15438 1527 aa24.52■■□□□ 1.52
PCNX4-213ENST00000556907 VWDEQ8N2E2 1590 aa24.51■■□□□ 1.51
PCNX4-213ENST00000556907 LMTK2Q8IWU2 1503 aa24.51■■□□□ 1.51
PCNX4-213ENST00000556907 C3P01024 1663 aa24.49■■□□□ 1.51
PCNX4-213ENST00000556907 SETD5Q9C0A6 1442 aa24.48■■□□□ 1.51
PCNX4-213ENST00000556907 SETD1BQ9UPS6 1966 aaKnown RBP24.47■■□□□ 1.51
PCNX4-213ENST00000556907 ARHGAP31Q2M1Z3 1444 aa24.47■■□□□ 1.51
PCNX4-213ENST00000556907 NPATQ14207 1427 aa24.46■■□□□ 1.51
PCNX4-213ENST00000556907 NUP155O75694 1391 aa24.46■■□□□ 1.51
PCNX4-213ENST00000556907 PZPP20742 1482 aa24.45■■□□□ 1.51
PCNX4-213ENST00000556907 CEP152O94986 1710 aa24.45■■□□□ 1.5
PCNX4-213ENST00000556907 CEBPAP49715 358 aaPredicted RBP24.45■■□□□ 1.5
PCNX4-213ENST00000556907 HRCP23327 699 aa24.44■■□□□ 1.5
PCNX4-213ENST00000556907 CAMSAP1Q5T5Y3 1602 aa24.43■■□□□ 1.5
PCNX4-213ENST00000556907 IQGAP3Q86VI3 1631 aa24.43■■□□□ 1.5
PCNX4-213ENST00000556907 PLPPR3Q6T4P5 718 aa24.4■■□□□ 1.5
PCNX4-213ENST00000556907 TET3O43151 1660 aa24.4■■□□□ 1.5
PCNX4-213ENST00000556907 RPRD2Q5VT52 1461 aaKnown RBP24.39■■□□□ 1.5
PCNX4-213ENST00000556907 TRIM52Q96A61 297 aa24.38■■□□□ 1.49
PCNX4-213ENST00000556907 EFCAB6Q5THR3 1501 aa24.38■■□□□ 1.49
PCNX4-213ENST00000556907 RAB3GAP2Q9H2M9 1393 aa24.37■■□□□ 1.49
PCNX4-213ENST00000556907 SPATA31D1Q6ZQQ2 1576 aa24.33■■□□□ 1.49
PCNX4-213ENST00000556907 FBXO31Q5XUX0 539 aaPredicted RBP24.33■■□□□ 1.49
PCNX4-213ENST00000556907 ERVK-7P63135 1459 aa24.32■■□□□ 1.48
PCNX4-213ENST00000556907 TNRQ92752 1358 aa24.32■■□□□ 1.48
PCNX4-213ENST00000556907 PREX1Q8TCU6 1659 aa24.32■■□□□ 1.48
PCNX4-213ENST00000556907 UHRF1BP1Q6BDS2 1440 aa24.32■■□□□ 1.48
PCNX4-213ENST00000556907 SLC4A1APQ9BWU0 796 aaKnown RBP24.29■■□□□ 1.48
PCNX4-213ENST00000556907 CFAP65Q6ZU64 1925 aaKnown RBP24.28■■□□□ 1.48
PCNX4-213ENST00000556907 NLRP1Q9C000 1473 aa24.28■■□□□ 1.48
PCNX4-213ENST00000556907 NOS1P29475 1434 aa24.27■■□□□ 1.48
PCNX4-213ENST00000556907 E9PCH4 1651 aa24.27■■□□□ 1.48
PCNX4-213ENST00000556907 MPHOSPH9Q99550 1183 aa24.25■■□□□ 1.47
PCNX4-213ENST00000556907 SLC52A1Q9NWF4 448 aa24.25■■□□□ 1.47
PCNX4-213ENST00000556907 LMTK3Q96Q04 1460 aa24.24■■□□□ 1.47
PCNX4-213ENST00000556907 MYO3AQ8NEV4 1616 aa24.24■■□□□ 1.47
PCNX4-213ENST00000556907 PKD2Q13563 968 aa24.23■■□□□ 1.47
PCNX4-213ENST00000556907 A2ML1A8K2U0 1454 aa24.22■■□□□ 1.47
PCNX4-213ENST00000556907 ZNF142P52746 1687 aaPredicted RBP24.21■■□□□ 1.47
PCNX4-213ENST00000556907 CEP170BQ9Y4F5 1589 aaPredicted RBP24.2■■□□□ 1.46
PCNX4-213ENST00000556907 PTPRTO14522 1441 aa24.19■■□□□ 1.46
PCNX4-213ENST00000556907 SYNMO15061 1565 aa24.17■■□□□ 1.46
PCNX4-213ENST00000556907 THEMISQ8N1K5 641 aaPredicted RBP24.16■■□□□ 1.46
PCNX4-213ENST00000556907 SPHKAPQ2M3C7 1700 aa24.15■■□□□ 1.46
PCNX4-213ENST00000556907 IDI1Q13907 227 aa24.15■■□□□ 1.46
PCNX4-213ENST00000556907 DHX57Q6P158 1386 aaKnown RBP24.15■■□□□ 1.46
PCNX4-213ENST00000556907 KDM5AP29375 1690 aaKnown RBP24.15■■□□□ 1.46
PCNX4-213ENST00000556907 UGGT1Q9NYU2 1555 aa24.14■■□□□ 1.45
PCNX4-213ENST00000556907 TRPM2O94759 1503 aa24.12■■□□□ 1.45
PCNX4-213ENST00000556907 PIK3C2BO00750 1634 aa24.12■■□□□ 1.45
PCNX4-213ENST00000556907 STAG3Q9UJ98 1225 aa24.11■■□□□ 1.45
PCNX4-213ENST00000556907 PLA2R1Q13018 1463 aa24.1■■□□□ 1.45
PCNX4-213ENST00000556907 HSPA2P54652 639 aa24.08■■□□□ 1.45
PCNX4-213ENST00000556907 UBR1Q8IWV7 1749 aa24.07■■□□□ 1.44
PCNX4-213ENST00000556907 ADGRB3O60242 1522 aa24.05■■□□□ 1.44
PCNX4-213ENST00000556907 FOXD1Q16676 465 aa24.05■■□□□ 1.44
PCNX4-213ENST00000556907 HDGFP51858 240 aaKnown RBP24.03■■□□□ 1.44
PCNX4-213ENST00000556907 CCDC144AA2RUR9 1427 aa24.02■■□□□ 1.44
PCNX4-213ENST00000556907 ANKLE2Q86XL3 938 aa24.02■■□□□ 1.44
PCNX4-213ENST00000556907 DMRT2Q9Y5R5 561 aa24.02■■□□□ 1.44
PCNX4-213ENST00000556907 TMEM131LA2VDJ0 1609 aa24.02■■□□□ 1.44
PCNX4-213ENST00000556907 SLIT1O75093 1534 aa24.01■■□□□ 1.43
PCNX4-213ENST00000556907 CLSPNQ9HAW4 1339 aa24.01■■□□□ 1.43
PCNX4-213ENST00000556907 CLTCL1P53675 1640 aa24■■□□□ 1.43
PCNX4-213ENST00000556907 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
PCNX4-213ENST00000556907 ANKRD30BQ9BXX2 1392 aa24■■□□□ 1.43
PCNX4-213ENST00000556907 TMEM2Q9UHN6 1383 aa24■■□□□ 1.43
PCNX4-213ENST00000556907 ARHGAP23Q9P227 1491 aa24■■□□□ 1.43
PCNX4-213ENST00000556907 KIF1BO60333 1816 aa23.99■■□□□ 1.43
PCNX4-213ENST00000556907 CHGAP10645 457 aaKnown RBP23.99■■□□□ 1.43
PCNX4-213ENST00000556907 EID1Q9Y6B2 187 aa23.99■■□□□ 1.43
PCNX4-213ENST00000556907 STRCQ7RTU9 1775 aa23.96■■□□□ 1.43
PCNX4-213ENST00000556907 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.95■■□□□ 1.42
PCNX4-213ENST00000556907 NEURL4Q96JN8 1562 aa23.95■■□□□ 1.42
PCNX4-213ENST00000556907 TXNDC2Q86VQ3 553 aa23.94■■□□□ 1.42
PCNX4-213ENST00000556907 POLR1AO95602 1720 aaPredicted RBP23.93■■□□□ 1.42
PCNX4-213ENST00000556907 MYO5BQ9ULV0 1848 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms