RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 HNRNPMP52272 730 aaKnown RBP eCLIP9.48□□□□□ -0.89
PRKCH-220ENST00000556164 CEP170BQ9Y4F5 1589 aaPredicted RBP9.48□□□□□ -0.89
PRKCH-220ENST00000556164 NCKAP5LQ9HCH0 1330 aa9.48□□□□□ -0.89
PRKCH-220ENST00000556164 A2MP01023 1474 aa9.47□□□□□ -0.89
PRKCH-220ENST00000556164 PLEKHH2Q8IVE3 1493 aa9.47□□□□□ -0.89
PRKCH-220ENST00000556164 CFDP1Q9UEE9 299 aaPredicted RBP9.46□□□□□ -0.9
PRKCH-220ENST00000556164 ZNF335Q9H4Z2 1342 aaPredicted RBP9.46□□□□□ -0.9
PRKCH-220ENST00000556164 CCNB3Q8WWL7 1395 aa9.46□□□□□ -0.9
PRKCH-220ENST00000556164 PLA2R1Q13018 1463 aa9.46□□□□□ -0.9
PRKCH-220ENST00000556164 UBAP1LF5GYI3 381 aa9.45□□□□□ -0.9
PRKCH-220ENST00000556164 GGT6Q6P531 493 aa9.45□□□□□ -0.9
PRKCH-220ENST00000556164 PTPRKQ15262 1439 aa9.45□□□□□ -0.9
PRKCH-220ENST00000556164 KIAA1107Q9UPP5 1409 aa9.45□□□□□ -0.9
PRKCH-220ENST00000556164 POLR1AO95602 1720 aaPredicted RBP9.45□□□□□ -0.9
PRKCH-220ENST00000556164 HAP1P54257 671 aaPredicted RBP9.44□□□□□ -0.9
PRKCH-220ENST00000556164 PKD2Q13563 968 aa9.44□□□□□ -0.9
PRKCH-220ENST00000556164 VSIG10Q8N0Z9 540 aa9.44□□□□□ -0.9
PRKCH-220ENST00000556164 TIAM1Q13009 1591 aa9.43□□□□□ -0.9
PRKCH-220ENST00000556164 TCOF1Q13428 1488 aaKnown RBP9.43□□□□□ -0.9
PRKCH-220ENST00000556164 MTUS2Q5JR59 1369 aa9.43□□□□□ -0.9
PRKCH-220ENST00000556164 DNMT1P26358 1616 aaKnown RBP9.42□□□□□ -0.9
PRKCH-220ENST00000556164 A2ML1A8K2U0 1454 aa9.41□□□□□ -0.9
PRKCH-220ENST00000556164 EHBP1L1Q8N3D4 1523 aa9.41□□□□□ -0.9
PRKCH-220ENST00000556164 ZNF644Q9H582 1327 aaPredicted RBP9.4□□□□□ -0.9
PRKCH-220ENST00000556164 NEURL4Q96JN8 1562 aa9.39□□□□□ -0.91
PRKCH-220ENST00000556164 ARXQ96QS3 562 aa9.39□□□□□ -0.91
PRKCH-220ENST00000556164 MBD5Q9P267 1494 aa9.39□□□□□ -0.91
PRKCH-220ENST00000556164 KDM5DQ9BY66 1539 aa9.38□□□□□ -0.91
PRKCH-220ENST00000556164 RTEL1-TNFRSF6BF6WH68 1400 aa9.38□□□□□ -0.91
PRKCH-220ENST00000556164 DHX29Q7Z478 1369 aaKnown RBP9.37□□□□□ -0.91
PRKCH-220ENST00000556164 TNRQ92752 1358 aa9.37□□□□□ -0.91
PRKCH-220ENST00000556164 CPS1P31327 1500 aa9.37□□□□□ -0.91
PRKCH-220ENST00000556164 PIP4K2BP78356 416 aa9.37□□□□□ -0.91
PRKCH-220ENST00000556164 MED1Q15648 1581 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-220ENST00000556164 PZPP20742 1482 aa9.36□□□□□ -0.91
PRKCH-220ENST00000556164 CCDC141Q6ZP82 1450 aa9.36□□□□□ -0.91
PRKCH-220ENST00000556164 KIF3BO15066 747 aa9.36□□□□□ -0.91
PRKCH-220ENST00000556164 FBXO31Q5XUX0 539 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-220ENST00000556164 CEP162Q5TB80 1403 aa9.36□□□□□ -0.91
PRKCH-220ENST00000556164 FAM135AQ9P2D6 1515 aa9.36□□□□□ -0.91
PRKCH-220ENST00000556164 CAMSAP2Q08AD1 1489 aa9.35□□□□□ -0.91
PRKCH-220ENST00000556164 SHANK2Q9UPX8 1470 aa9.35□□□□□ -0.91
PRKCH-220ENST00000556164 TOM1O60784 492 aa9.35□□□□□ -0.91
PRKCH-220ENST00000556164 HSPA1LP34931 641 aa9.35□□□□□ -0.91
PRKCH-220ENST00000556164 TPRNQ4KMQ1 711 aa9.35□□□□□ -0.91
PRKCH-220ENST00000556164 CFAP65Q6ZU64 1925 aaKnown RBP9.35□□□□□ -0.91
PRKCH-220ENST00000556164 WASHC2CQ9Y4E1 1318 aa9.34□□□□□ -0.91
PRKCH-220ENST00000556164 IQGAP1P46940 1657 aa9.34□□□□□ -0.91
PRKCH-220ENST00000556164 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.34□□□□□ -0.91
PRKCH-220ENST00000556164 VWDEQ8N2E2 1590 aa9.33□□□□□ -0.92
PRKCH-220ENST00000556164 UGGT1Q9NYU2 1555 aa9.33□□□□□ -0.92
PRKCH-220ENST00000556164 ANKLE2Q86XL3 938 aa9.33□□□□□ -0.92
PRKCH-220ENST00000556164 DEPDC5O75140 1603 aa9.33□□□□□ -0.92
PRKCH-220ENST00000556164 NCOA2Q15596 1464 aa9.33□□□□□ -0.92
PRKCH-220ENST00000556164 NLRP1Q9C000 1473 aa9.33□□□□□ -0.92
PRKCH-220ENST00000556164 THEMISQ8N1K5 641 aaPredicted RBP9.32□□□□□ -0.92
PRKCH-220ENST00000556164 ARHGEF5Q12774 1597 aa9.32□□□□□ -0.92
PRKCH-220ENST00000556164 ZC3H13Q5T200 1668 aaKnown RBP9.32□□□□□ -0.92
PRKCH-220ENST00000556164 STRCP1A6NGW2 1772 aa9.32□□□□□ -0.92
PRKCH-220ENST00000556164 NPHP4O75161 1426 aaPredicted RBP9.31□□□□□ -0.92
PRKCH-220ENST00000556164 MIA2Q96PC5 1412 aa9.31□□□□□ -0.92
PRKCH-220ENST00000556164 RNF17Q9BXT8 1623 aaKnown RBP9.31□□□□□ -0.92
PRKCH-220ENST00000556164 RNF216Q9NWF9 866 aaPredicted RBP9.31□□□□□ -0.92
PRKCH-220ENST00000556164 CEP152O94986 1710 aa9.31□□□□□ -0.92
PRKCH-220ENST00000556164 MED14O60244 1454 aa9.3□□□□□ -0.92
PRKCH-220ENST00000556164 RSPH4AQ5TD94 716 aa9.3□□□□□ -0.92
PRKCH-220ENST00000556164 ALKQ9UM73 1620 aa9.3□□□□□ -0.92
PRKCH-220ENST00000556164 SYNMO15061 1565 aa9.29□□□□□ -0.92
PRKCH-220ENST00000556164 TSPY4P0CV99 314 aa9.29□□□□□ -0.92
PRKCH-220ENST00000556164 TSPY10P0CW01 314 aa9.29□□□□□ -0.92
PRKCH-220ENST00000556164 ERICH6Q7L0X2 663 aa9.29□□□□□ -0.92
PRKCH-220ENST00000556164 ABCC3O15438 1527 aa9.29□□□□□ -0.92
PRKCH-220ENST00000556164 UBR1Q8IWV7 1749 aa9.28□□□□□ -0.92
PRKCH-220ENST00000556164 EIF2AK4Q9P2K8 1649 aaKnown RBP9.28□□□□□ -0.92
PRKCH-220ENST00000556164 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-220ENST00000556164 MAST1Q9Y2H9 1570 aa9.28□□□□□ -0.92
PRKCH-220ENST00000556164 ERVK-7P63135 1459 aa9.27□□□□□ -0.93
PRKCH-220ENST00000556164 MROH1Q8NDA8 1641 aa9.27□□□□□ -0.93
PRKCH-220ENST00000556164 LRRC7Q96NW7 1537 aa9.26□□□□□ -0.93
PRKCH-220ENST00000556164 XIRP1Q702N8 1843 aaKnown RBP9.25□□□□□ -0.93
PRKCH-220ENST00000556164 LRRC9Q6ZRR7 1453 aa9.24□□□□□ -0.93
PRKCH-220ENST00000556164 SCAF11Q99590 1463 aaKnown RBP9.24□□□□□ -0.93
PRKCH-220ENST00000556164 TIMELESSQ9UNS1 1208 aa9.24□□□□□ -0.93
PRKCH-220ENST00000556164 SLC4A2P04920 1241 aa9.23□□□□□ -0.93
PRKCH-220ENST00000556164 CROCC2H7BZ55 1655 aa9.23□□□□□ -0.93
PRKCH-220ENST00000556164 DUOX2Q9NRD8 1548 aa9.22□□□□□ -0.93
PRKCH-220ENST00000556164 VPS8Q8N3P4 1428 aa9.22□□□□□ -0.93
PRKCH-220ENST00000556164 SLIT1O75093 1534 aa9.21□□□□□ -0.93
PRKCH-220ENST00000556164 PRDM15P57071 1507 aaPredicted RBP9.21□□□□□ -0.93
PRKCH-220ENST00000556164 PIK3C2BO00750 1634 aa9.21□□□□□ -0.93
PRKCH-220ENST00000556164 MYOM3Q5VTT5 1437 aa9.21□□□□□ -0.94
PRKCH-220ENST00000556164 ARHGAP23Q9P227 1491 aa9.21□□□□□ -0.94
PRKCH-220ENST00000556164 LTKP29376 864 aa9.2□□□□□ -0.94
PRKCH-220ENST00000556164 TXNDC2Q86VQ3 553 aa9.2□□□□□ -0.94
PRKCH-220ENST00000556164 FBXO3Q9UK99 471 aa9.2□□□□□ -0.94
PRKCH-220ENST00000556164 EID1Q9Y6B2 187 aa9.19□□□□□ -0.94
PRKCH-220ENST00000556164 KIF15Q9NS87 1388 aa9.19□□□□□ -0.94
PRKCH-220ENST00000556164 KDM5AP29375 1690 aaKnown RBP9.18□□□□□ -0.94
PRKCH-220ENST00000556164 MAP3K1Q13233 1512 aa9.18□□□□□ -0.94
PRKCH-220ENST00000556164 ARHGAP31Q2M1Z3 1444 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms