RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 TRIM26Q12899 539 aaPredicted RBP21.24■□□□□ 0.99
SNX6-206ENST00000556162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.23■□□□□ 0.995e-7■■□□□ 12.3
SNX6-206ENST00000556162 WASHC2CQ9Y4E1 1318 aa21.21■□□□□ 0.99
SNX6-206ENST00000556162 MADDQ8WXG6 1647 aa21.2■□□□□ 0.98
SNX6-206ENST00000556162 RNF17Q9BXT8 1623 aaKnown RBP21.19■□□□□ 0.98
SNX6-206ENST00000556162 KANK1Q14678 1352 aa21.19■□□□□ 0.98
SNX6-206ENST00000556162 CNTLNQ9NXG0 1405 aa21.19■□□□□ 0.98
SNX6-206ENST00000556162 FER1L4A9Z1Z3 1794 aa21.17■□□□□ 0.98
SNX6-206ENST00000556162 GCC2Q8IWJ2 1684 aa21.16■□□□□ 0.98
SNX6-206ENST00000556162 SETD5Q9C0A6 1442 aa21.15■□□□□ 0.98
SNX6-206ENST00000556162 RIMS1Q86UR5 1692 aaKnown RBP21.14■□□□□ 0.98
SNX6-206ENST00000556162 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
SNX6-206ENST00000556162 DEPDC5O75140 1603 aa21.14■□□□□ 0.97
SNX6-206ENST00000556162 MROH1Q8NDA8 1641 aa21.14■□□□□ 0.97
SNX6-206ENST00000556162 PRDM15P57071 1507 aaPredicted RBP21.14■□□□□ 0.97
SNX6-206ENST00000556162 FAM135AQ9P2D6 1515 aa21.14■□□□□ 0.97
SNX6-206ENST00000556162 PTPRMP28827 1452 aa21.14■□□□□ 0.97
SNX6-206ENST00000556162 ZMYM3Q14202 1370 aa21.14■□□□□ 0.97
SNX6-206ENST00000556162 KDM5DQ9BY66 1539 aa21.13■□□□□ 0.97
SNX6-206ENST00000556162 NUP155O75694 1391 aa21.12■□□□□ 0.97
SNX6-206ENST00000556162 CEBPAP49715 358 aaPredicted RBP21.11■□□□□ 0.97
SNX6-206ENST00000556162 CLTCQ00610 1675 aaKnown RBP21.11■□□□□ 0.97
SNX6-206ENST00000556162 TRIM52Q96A61 297 aa21.11■□□□□ 0.97
SNX6-206ENST00000556162 ABCC3O15438 1527 aa21.1■□□□□ 0.97
SNX6-206ENST00000556162 ACIN1Q9UKV3 1341 aaKnown RBP21.09■□□□□ 0.97
SNX6-206ENST00000556162 UNC13BO14795 1591 aa21.09■□□□□ 0.97
SNX6-206ENST00000556162 RAB3GAP2Q9H2M9 1393 aa21.07■□□□□ 0.96
SNX6-206ENST00000556162 ZC3H13Q5T200 1668 aaKnown RBP21.07■□□□□ 0.96
SNX6-206ENST00000556162 MROH2AA6NES4 1674 aa21.07■□□□□ 0.96
SNX6-206ENST00000556162 VWDEQ8N2E2 1590 aa21.07■□□□□ 0.96
SNX6-206ENST00000556162 LMTK2Q8IWU2 1503 aa21.05■□□□□ 0.96
SNX6-206ENST00000556162 HRCP23327 699 aa21.05■□□□□ 0.96
SNX6-206ENST00000556162 CEP152O94986 1710 aa21.04■□□□□ 0.96
SNX6-206ENST00000556162 C3P01024 1663 aa21.03■□□□□ 0.96
SNX6-206ENST00000556162 ARHGAP31Q2M1Z3 1444 aa21.01■□□□□ 0.95
SNX6-206ENST00000556162 PZPP20742 1482 aa21.01■□□□□ 0.95
SNX6-206ENST00000556162 FBXO31Q5XUX0 539 aaPredicted RBP21.01■□□□□ 0.95
SNX6-206ENST00000556162 IQGAP3Q86VI3 1631 aa21.01■□□□□ 0.95
SNX6-206ENST00000556162 CAMSAP1Q5T5Y3 1602 aa21.01■□□□□ 0.95
SNX6-206ENST00000556162 SLC4A1APQ9BWU0 796 aaKnown RBP21■□□□□ 0.95
SNX6-206ENST00000556162 PCGF6Q9BYE7 350 aa20.98■□□□□ 0.95
SNX6-206ENST00000556162 NPATQ14207 1427 aa20.98■□□□□ 0.95
SNX6-206ENST00000556162 EFCAB6Q5THR3 1501 aa20.97■□□□□ 0.95
SNX6-206ENST00000556162 TET3O43151 1660 aa20.97■□□□□ 0.95
SNX6-206ENST00000556162 MPHOSPH9Q99550 1183 aa20.96■□□□□ 0.95
SNX6-206ENST00000556162 RPRD2Q5VT52 1461 aaKnown RBP20.95■□□□□ 0.94
SNX6-206ENST00000556162 PKD2Q13563 968 aa20.94■□□□□ 0.94
SNX6-206ENST00000556162 TNRQ92752 1358 aa20.93■□□□□ 0.94
SNX6-206ENST00000556162 SETD1BQ9UPS6 1966 aaKnown RBP20.93■□□□□ 0.94
SNX6-206ENST00000556162 ERVK-7P63135 1459 aa20.93■□□□□ 0.94
SNX6-206ENST00000556162 CFAP65Q6ZU64 1925 aaKnown RBP20.91■□□□□ 0.94
SNX6-206ENST00000556162 SPATA31D1Q6ZQQ2 1576 aa20.9■□□□□ 0.94
SNX6-206ENST00000556162 E9PCH4 1651 aa20.89■□□□□ 0.93
SNX6-206ENST00000556162 UHRF1BP1Q6BDS2 1440 aa20.89■□□□□ 0.93
SNX6-206ENST00000556162 PREX1Q8TCU6 1659 aa20.89■□□□□ 0.93
SNX6-206ENST00000556162 NOS1P29475 1434 aa20.88■□□□□ 0.93
SNX6-206ENST00000556162 FOXD1Q16676 465 aa20.86■□□□□ 0.93
SNX6-206ENST00000556162 SLC52A1Q9NWF4 448 aa20.86■□□□□ 0.93
SNX6-206ENST00000556162 NLRP1Q9C000 1473 aa20.84■□□□□ 0.93
SNX6-206ENST00000556162 IDI1Q13907 227 aa20.84■□□□□ 0.93
SNX6-206ENST00000556162 PTPRTO14522 1441 aa20.83■□□□□ 0.92
SNX6-206ENST00000556162 MYO3AQ8NEV4 1616 aa20.81■□□□□ 0.92
SNX6-206ENST00000556162 SYNMO15061 1565 aa20.81■□□□□ 0.92
SNX6-206ENST00000556162 LMTK3Q96Q04 1460 aa20.81■□□□□ 0.92
SNX6-206ENST00000556162 A2ML1A8K2U0 1454 aa20.8■□□□□ 0.92
SNX6-206ENST00000556162 STAG3Q9UJ98 1225 aa20.8■□□□□ 0.92
SNX6-206ENST00000556162 HSPA2P54652 639 aa20.78■□□□□ 0.92
SNX6-206ENST00000556162 THEMISQ8N1K5 641 aaPredicted RBP20.78■□□□□ 0.92
SNX6-206ENST00000556162 CEP170BQ9Y4F5 1589 aaPredicted RBP20.78■□□□□ 0.92
SNX6-206ENST00000556162 SPHKAPQ2M3C7 1700 aa20.77■□□□□ 0.92
SNX6-206ENST00000556162 PLA2R1Q13018 1463 aa20.77■□□□□ 0.92
SNX6-206ENST00000556162 UGGT1Q9NYU2 1555 aa20.76■□□□□ 0.91
SNX6-206ENST00000556162 TRPM2O94759 1503 aa20.76■□□□□ 0.91
SNX6-206ENST00000556162 CHGAP10645 457 aaKnown RBP20.75■□□□□ 0.91
SNX6-206ENST00000556162 ZNF142P52746 1687 aaPredicted RBP20.74■□□□□ 0.91
SNX6-206ENST00000556162 CCDC144AA2RUR9 1427 aa20.72■□□□□ 0.91
SNX6-206ENST00000556162 PIK3C2BO00750 1634 aa20.72■□□□□ 0.91
SNX6-206ENST00000556162 ANKRD30BQ9BXX2 1392 aa20.71■□□□□ 0.91
SNX6-206ENST00000556162 DHX57Q6P158 1386 aaKnown RBP20.71■□□□□ 0.91
SNX6-206ENST00000556162 CLTCL1P53675 1640 aa20.69■□□□□ 0.9
SNX6-206ENST00000556162 ADGRB3O60242 1522 aa20.68■□□□□ 0.9
SNX6-206ENST00000556162 UBR1Q8IWV7 1749 aa20.68■□□□□ 0.9
SNX6-206ENST00000556162 ANKLE2Q86XL3 938 aa20.67■□□□□ 0.9
SNX6-206ENST00000556162 KDM5AP29375 1690 aaKnown RBP20.66■□□□□ 0.9
SNX6-206ENST00000556162 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
SNX6-206ENST00000556162 TMEM131LA2VDJ0 1609 aa20.65■□□□□ 0.9
SNX6-206ENST00000556162 TMEM2Q9UHN6 1383 aa20.65■□□□□ 0.9
SNX6-206ENST00000556162 HDGFP51858 240 aaKnown RBP20.64■□□□□ 0.9
SNX6-206ENST00000556162 EID1Q9Y6B2 187 aa20.64■□□□□ 0.9
SNX6-206ENST00000556162 TXNDC2Q86VQ3 553 aa20.64■□□□□ 0.89
SNX6-206ENST00000556162 NCKAP5LQ9HCH0 1330 aa20.63■□□□□ 0.89
SNX6-206ENST00000556162 SLIT1O75093 1534 aa20.61■□□□□ 0.89
SNX6-206ENST00000556162 KIF1BO60333 1816 aa20.61■□□□□ 0.89
SNX6-206ENST00000556162 RGL3Q3MIN7 710 aa20.61■□□□□ 0.89
SNX6-206ENST00000556162 ARHGAP23Q9P227 1491 aa20.61■□□□□ 0.89
SNX6-206ENST00000556162 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.6■□□□□ 0.89
SNX6-206ENST00000556162 LTKP29376 864 aa20.6■□□□□ 0.89
SNX6-206ENST00000556162 DMRT2Q9Y5R5 561 aa20.59■□□□□ 0.89
SNX6-206ENST00000556162 RIMS2Q9UQ26 1411 aa20.59■□□□□ 0.89
SNX6-206ENST00000556162 MYO5BQ9ULV0 1848 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms