RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 DHX29Q7Z478 1369 aaKnown RBP30.78■■■□□ 2.52
SUPT16H-203ENST00000555752 PIP4K2BP78356 416 aa30.77■■■□□ 2.52
SUPT16H-203ENST00000555752 TNRQ92752 1358 aa30.76■■■□□ 2.51
SUPT16H-203ENST00000555752 RTEL1-TNFRSF6BF6WH68 1400 aa30.75■■■□□ 2.51
SUPT16H-203ENST00000555752 KIF3BO15066 747 aa30.74■■■□□ 2.51
SUPT16H-203ENST00000555752 EHBP1L1Q8N3D4 1523 aa30.73■■■□□ 2.51
SUPT16H-203ENST00000555752 MED1Q15648 1581 aaPredicted RBP30.72■■■□□ 2.51
SUPT16H-203ENST00000555752 SHANK2Q9UPX8 1470 aa30.71■■■□□ 2.51
SUPT16H-203ENST00000555752 CPS1P31327 1500 aa30.7■■■□□ 2.51
SUPT16H-203ENST00000555752 PZPP20742 1482 aa30.7■■■□□ 2.5
SUPT16H-203ENST00000555752 KDM5DQ9BY66 1539 aa30.69■■■□□ 2.5
SUPT16H-203ENST00000555752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.68■■■□□ 2.5
SUPT16H-203ENST00000555752 CEP162Q5TB80 1403 aa30.67■■■□□ 2.5
SUPT16H-203ENST00000555752 TOM1O60784 492 aa30.67■■■□□ 2.5
SUPT16H-203ENST00000555752 VWDEQ8N2E2 1590 aa30.65■■■□□ 2.5
SUPT16H-203ENST00000555752 CCDC141Q6ZP82 1450 aa30.64■■■□□ 2.5
SUPT16H-203ENST00000555752 WASHC2CQ9Y4E1 1318 aa30.64■■■□□ 2.5
SUPT16H-203ENST00000555752 CAMSAP2Q08AD1 1489 aa30.63■■■□□ 2.49
SUPT16H-203ENST00000555752 ANKLE2Q86XL3 938 aa30.62■■■□□ 2.49
SUPT16H-203ENST00000555752 ALKQ9UM73 1620 aa30.61■■■□□ 2.49
SUPT16H-203ENST00000555752 MIA2Q96PC5 1412 aa30.6■■■□□ 2.49
SUPT16H-203ENST00000555752 UGGT1Q9NYU2 1555 aa30.58■■■□□ 2.49
SUPT16H-203ENST00000555752 FAM135AQ9P2D6 1515 aa30.58■■■□□ 2.49
SUPT16H-203ENST00000555752 NPHP4O75161 1426 aaPredicted RBP30.58■■■□□ 2.49
SUPT16H-203ENST00000555752 NCOA2Q15596 1464 aa30.57■■■□□ 2.48
SUPT16H-203ENST00000555752 THEMISQ8N1K5 641 aaPredicted RBP30.57■■■□□ 2.48
SUPT16H-203ENST00000555752 NLRP1Q9C000 1473 aa30.57■■■□□ 2.48
SUPT16H-203ENST00000555752 DEPDC5O75140 1603 aa30.55■■■□□ 2.48
SUPT16H-203ENST00000555752 MED14O60244 1454 aa30.54■■■□□ 2.48
SUPT16H-203ENST00000555752 SENP3Q9H4L4 574 aaPredicted RBP30.53■■■□□ 2.48
SUPT16H-203ENST00000555752 IQGAP1P46940 1657 aa30.52■■■□□ 2.48
SUPT16H-203ENST00000555752 STRCP1A6NGW2 1772 aa30.51■■■□□ 2.48
SUPT16H-203ENST00000555752 RSPH4AQ5TD94 716 aa30.5■■■□□ 2.47
SUPT16H-203ENST00000555752 ARHGEF5Q12774 1597 aa30.48■■■□□ 2.47
SUPT16H-203ENST00000555752 PHF23Q9BUL5 403 aaPredicted RBP30.45■■■□□ 2.47
SUPT16H-203ENST00000555752 ABCC3O15438 1527 aa30.45■■■□□ 2.47
SUPT16H-203ENST00000555752 RNF17Q9BXT8 1623 aaKnown RBP30.44■■■□□ 2.46
SUPT16H-203ENST00000555752 LRRC7Q96NW7 1537 aa30.44■■■□□ 2.46
SUPT16H-203ENST00000555752 TSPY4P0CV99 314 aa30.44■■■□□ 2.46
SUPT16H-203ENST00000555752 TSPY10P0CW01 314 aa30.44■■■□□ 2.46
SUPT16H-203ENST00000555752 ERVK-7P63135 1459 aa30.39■■■□□ 2.46
SUPT16H-203ENST00000555752 ZC3H13Q5T200 1668 aaKnown RBP30.38■■■□□ 2.45
SUPT16H-203ENST00000555752 MROH1Q8NDA8 1641 aa30.37■■■□□ 2.45
SUPT16H-203ENST00000555752 CFAP65Q6ZU64 1925 aaKnown RBP30.36■■■□□ 2.45
SUPT16H-203ENST00000555752 SYNMO15061 1565 aa30.36■■■□□ 2.45
SUPT16H-203ENST00000555752 CEP152O94986 1710 aa30.35■■■□□ 2.45
SUPT16H-203ENST00000555752 UBR1Q8IWV7 1749 aa30.34■■■□□ 2.45
SUPT16H-203ENST00000555752 MAST1Q9Y2H9 1570 aa30.34■■■□□ 2.45
SUPT16H-203ENST00000555752 EIF2AK4Q9P2K8 1649 aaKnown RBP30.32■■■□□ 2.44
SUPT16H-203ENST00000555752 LRRC9Q6ZRR7 1453 aa30.28■■■□□ 2.44
SUPT16H-203ENST00000555752 SCAF11Q99590 1463 aaKnown RBP30.28■■■□□ 2.44
SUPT16H-203ENST00000555752 LTKP29376 864 aa30.28■■■□□ 2.44
SUPT16H-203ENST00000555752 XIRP1Q702N8 1843 aaKnown RBP30.24■■■□□ 2.43
SUPT16H-203ENST00000555752 RGS17Q9UGC6 210 aaPredicted RBP30.24■■■□□ 2.43
SUPT16H-203ENST00000555752 TXNDC2Q86VQ3 553 aa30.23■■■□□ 2.43
SUPT16H-203ENST00000555752 ARHGAP23Q9P227 1491 aa30.22■■■□□ 2.43
SUPT16H-203ENST00000555752 KANK4Q5T7N3 995 aaPredicted RBP30.21■■■□□ 2.43
SUPT16H-203ENST00000555752 SLIT1O75093 1534 aa30.21■■■□□ 2.43
SUPT16H-203ENST00000555752 DUOX2Q9NRD8 1548 aa30.18■■■□□ 2.42
SUPT16H-203ENST00000555752 VPS8Q8N3P4 1428 aa30.16■■■□□ 2.42
SUPT16H-203ENST00000555752 MYOM3Q5VTT5 1437 aa30.15■■■□□ 2.42
SUPT16H-203ENST00000555752 PRDM15P57071 1507 aaPredicted RBP30.14■■■□□ 2.42
SUPT16H-203ENST00000555752 PIK3C2BO00750 1634 aa30.14■■■□□ 2.41
SUPT16H-203ENST00000555752 ARHGAP31Q2M1Z3 1444 aa30.13■■■□□ 2.41
SUPT16H-203ENST00000555752 EID1Q9Y6B2 187 aa30.11■■■□□ 2.41
SUPT16H-203ENST00000555752 KIF15Q9NS87 1388 aa30.11■■■□□ 2.41
SUPT16H-203ENST00000555752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.1■■■□□ 2.411e-10■■■■□ 20.4
SUPT16H-203ENST00000555752 RRP7BPQ9NSQ0 103 aa30.1■■■□□ 2.41
SUPT16H-203ENST00000555752 TMEM2Q9UHN6 1383 aa30.08■■■□□ 2.41
SUPT16H-203ENST00000555752 RBM33Q96EV2 1170 aaKnown RBP30.06■■■□□ 2.4
SUPT16H-203ENST00000555752 CROCC2H7BZ55 1655 aa30.06■■■□□ 2.4
SUPT16H-203ENST00000555752 ABCC5O15440 1437 aa30.05■■■□□ 2.4
SUPT16H-203ENST00000555752 FAM135BQ49AJ0 1406 aa30.05■■■□□ 2.4
SUPT16H-203ENST00000555752 ERBINQ96RT1 1412 aa30.05■■■□□ 2.4
SUPT16H-203ENST00000555752 TMEM94Q12767 1356 aa30.05■■■□□ 2.4
SUPT16H-203ENST00000555752 LOC105371045A0A1W2PR82 267 aa30.03■■■□□ 2.4
SUPT16H-203ENST00000555752 POTEAQ6S8J7 498 aa30.03■■■□□ 2.4
SUPT16H-203ENST00000555752 STAG3Q9UJ98 1225 aa30.03■■■□□ 2.4
SUPT16H-203ENST00000555752 MAP3K1Q13233 1512 aa30.02■■■□□ 2.4
SUPT16H-203ENST00000555752 SLC26A8Q96RN1 970 aa30.01■■■□□ 2.39
SUPT16H-203ENST00000555752 EFCAB6Q5THR3 1501 aa30.01■■■□□ 2.39
SUPT16H-203ENST00000555752 IDI1Q13907 227 aa30■■■□□ 2.39
SUPT16H-203ENST00000555752 ROBO1Q9Y6N7 1651 aa30■■■□□ 2.39
SUPT16H-203ENST00000555752 KCNA6P17658 529 aa29.98■■■□□ 2.39
SUPT16H-203ENST00000555752 TET3O43151 1660 aa29.98■■■□□ 2.39
SUPT16H-203ENST00000555752 PTPN23Q9H3S7 1636 aa29.97■■■□□ 2.39
SUPT16H-203ENST00000555752 PROSER2Q86WR7 435 aaPredicted RBP29.96■■■□□ 2.39
SUPT16H-203ENST00000555752 DAPK1P53355 1430 aa29.96■■■□□ 2.39
SUPT16H-203ENST00000555752 KDM5AP29375 1690 aaKnown RBP29.95■■■□□ 2.39
SUPT16H-203ENST00000555752 KANK1Q14678 1352 aa29.95■■■□□ 2.39
SUPT16H-203ENST00000555752 CHIC2Q9UKJ5 165 aa29.92■■■□□ 2.38
SUPT16H-203ENST00000555752 LMTK2Q8IWU2 1503 aa29.91■■■□□ 2.38
SUPT16H-203ENST00000555752 ADGRB3O60242 1522 aa29.87■■■□□ 2.37
SUPT16H-203ENST00000555752 NWD1Q149M9 1564 aa29.87■■■□□ 2.37
SUPT16H-203ENST00000555752 NOS1P29475 1434 aa29.87■■■□□ 2.37
SUPT16H-203ENST00000555752 SETD1AO15047 1707 aaKnown RBP29.85■■■□□ 2.37
SUPT16H-203ENST00000555752 NKTRP30414 1462 aaKnown RBP29.85■■■□□ 2.37
SUPT16H-203ENST00000555752 BCANQ96GW7 911 aa29.84■■■□□ 2.37
SUPT16H-203ENST00000555752 ANKRD30AQ9BXX3 1397 aa29.83■■■□□ 2.37
SUPT16H-203ENST00000555752 PHLPP1O60346 1717 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms