RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 ZNF518AQ6AHZ1 1483 aa11.77□□□□□ -0.52
PCNX4-210ENST00000555740 BCORL1Q5H9F3 1711 aa11.76□□□□□ -0.53
PCNX4-210ENST00000555740 KIDINS220Q9ULH0 1771 aa11.76□□□□□ -0.53
PCNX4-210ENST00000555740 ATP7AQ04656 1500 aa11.76□□□□□ -0.53
PCNX4-210ENST00000555740 NAIPQ13075 1403 aa11.76□□□□□ -0.53
PCNX4-210ENST00000555740 TRAPPC8Q9Y2L5 1435 aa11.76□□□□□ -0.53
PCNX4-210ENST00000555740 EIF2AK4Q9P2K8 1649 aaKnown RBP11.76□□□□□ -0.53
PCNX4-210ENST00000555740 NCOA1Q15788 1441 aa11.74□□□□□ -0.53
PCNX4-210ENST00000555740 MLH3Q9UHC1 1453 aa11.74□□□□□ -0.53
PCNX4-210ENST00000555740 SCAPERQ9BY12 1400 aa11.74□□□□□ -0.53
PCNX4-210ENST00000555740 SETD5Q9C0A6 1442 aa11.73□□□□□ -0.53
PCNX4-210ENST00000555740 DENND4BO75064 1496 aaPredicted RBP11.73□□□□□ -0.53
PCNX4-210ENST00000555740 UNC13BO14795 1591 aa11.73□□□□□ -0.53
PCNX4-210ENST00000555740 DUOX2Q9NRD8 1548 aa11.73□□□□□ -0.53
PCNX4-210ENST00000555740 REREQ9P2R6 1566 aa11.73□□□□□ -0.53
PCNX4-210ENST00000555740 FAM69CQ0P6D2 419 aa11.73□□□□□ -0.53
PCNX4-210ENST00000555740 KDM6BO15054 1643 aa11.72□□□□□ -0.53
PCNX4-210ENST00000555740 ABCA6Q8N139 1617 aa11.72□□□□□ -0.53
PCNX4-210ENST00000555740 KDM5DQ9BY66 1539 aa11.72□□□□□ -0.53
PCNX4-210ENST00000555740 DEPDC5O75140 1603 aa11.72□□□□□ -0.53
PCNX4-210ENST00000555740 ANKRD30AQ9BXX3 1397 aa11.72□□□□□ -0.53
PCNX4-210ENST00000555740 HRCP23327 699 aa11.71□□□□□ -0.53
PCNX4-210ENST00000555740 DIP2CQ9Y2E4 1556 aa11.71□□□□□ -0.54
PCNX4-210ENST00000555740 MAGI2Q86UL8 1455 aa11.71□□□□□ -0.54
PCNX4-210ENST00000555740 ABCB7O75027 752 aa11.7□□□□□ -0.54
PCNX4-210ENST00000555740 ZNF777Q9ULD5 760 aaPredicted RBP11.7□□□□□ -0.54
PCNX4-210ENST00000555740 ARHGEF40Q8TER5 1519 aa11.7□□□□□ -0.54
PCNX4-210ENST00000555740 ERBINQ96RT1 1412 aa11.7□□□□□ -0.54
PCNX4-210ENST00000555740 RNF17Q9BXT8 1623 aaKnown RBP11.7□□□□□ -0.54
PCNX4-210ENST00000555740 CAPN15O75808 1086 aa11.69□□□□□ -0.54
PCNX4-210ENST00000555740 RAB3GAP2Q9H2M9 1393 aa11.69□□□□□ -0.54
PCNX4-210ENST00000555740 ACIN1Q9UKV3 1341 aaKnown RBP11.69□□□□□ -0.54
PCNX4-210ENST00000555740 HNRNPMP52272 730 aaKnown RBP eCLIP11.68□□□□□ -0.54
PCNX4-210ENST00000555740 KIF15Q9NS87 1388 aa11.68□□□□□ -0.54
PCNX4-210ENST00000555740 IQGAP3Q86VI3 1631 aa11.66□□□□□ -0.54
PCNX4-210ENST00000555740 KDM2AQ9Y2K7 1162 aa11.65□□□□□ -0.54
PCNX4-210ENST00000555740 MROH1Q8NDA8 1641 aa11.65□□□□□ -0.54
PCNX4-210ENST00000555740 PRDM15P57071 1507 aaPredicted RBP11.65□□□□□ -0.54
PCNX4-210ENST00000555740 ANKRD50Q9ULJ7 1429 aa11.65□□□□□ -0.54
PCNX4-210ENST00000555740 TSPY4P0CV99 314 aa11.65□□□□□ -0.54
PCNX4-210ENST00000555740 TSPY10P0CW01 314 aa11.65□□□□□ -0.54
PCNX4-210ENST00000555740 VWDEQ8N2E2 1590 aa11.65□□□□□ -0.55
PCNX4-210ENST00000555740 SPAG9O60271 1321 aaKnown RBP11.64□□□□□ -0.55
PCNX4-210ENST00000555740 ITGAEP38570 1179 aa11.64□□□□□ -0.55
PCNX4-210ENST00000555740 COL17A1Q9UMD9 1497 aaPredicted RBP11.64□□□□□ -0.55
PCNX4-210ENST00000555740 FAM135AQ9P2D6 1515 aa11.64□□□□□ -0.55
PCNX4-210ENST00000555740 AGLP35573 1532 aa11.63□□□□□ -0.55
PCNX4-210ENST00000555740 A2MP01023 1474 aa11.62□□□□□ -0.55
PCNX4-210ENST00000555740 ZC3H13Q5T200 1668 aaKnown RBP11.62□□□□□ -0.55
PCNX4-210ENST00000555740 PZPP20742 1482 aa11.61□□□□□ -0.55
PCNX4-210ENST00000555740 AFAP1Q8N556 730 aa11.6□□□□□ -0.55
PCNX4-210ENST00000555740 CHIC2Q9UKJ5 165 aa11.6□□□□□ -0.55
PCNX4-210ENST00000555740 DHX57Q6P158 1386 aaKnown RBP11.6□□□□□ -0.55
PCNX4-210ENST00000555740 DHX29Q7Z478 1369 aaKnown RBP11.6□□□□□ -0.55
PCNX4-210ENST00000555740 SIGLEC1Q9BZZ2 1709 aa11.6□□□□□ -0.55
PCNX4-210ENST00000555740 RRP7BPQ9NSQ0 103 aa11.59□□□□□ -0.55
PCNX4-210ENST00000555740 LMTK2Q8IWU2 1503 aa11.59□□□□□ -0.55
PCNX4-210ENST00000555740 TET3O43151 1660 aa11.59□□□□□ -0.55
PCNX4-210ENST00000555740 ATP10AO60312 1499 aa11.58□□□□□ -0.56
PCNX4-210ENST00000555740 YEATS2Q9ULM3 1422 aa11.58□□□□□ -0.56
PCNX4-210ENST00000555740 CLSPNQ9HAW4 1339 aa11.57□□□□□ -0.56
PCNX4-210ENST00000555740 TAOK2Q9UL54 1235 aa11.57□□□□□ -0.56
PCNX4-210ENST00000555740 RNF39Q9H2S5 420 aa11.56□□□□□ -0.56
PCNX4-210ENST00000555740 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
PCNX4-210ENST00000555740 RGL2O15211 777 aa11.55□□□□□ -0.56
PCNX4-210ENST00000555740 RAPGEF3O95398 923 aa11.55□□□□□ -0.56
PCNX4-210ENST00000555740 CEP152O94986 1710 aa11.55□□□□□ -0.56
PCNX4-210ENST00000555740 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
PCNX4-210ENST00000555740 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
PCNX4-210ENST00000555740 EFCAB6Q5THR3 1501 aa11.54□□□□□ -0.56
PCNX4-210ENST00000555740 BCANQ96GW7 911 aa11.54□□□□□ -0.56
PCNX4-210ENST00000555740 CAMSAP1Q5T5Y3 1602 aa11.53□□□□□ -0.56
PCNX4-210ENST00000555740 E9PCH4 1651 aa11.53□□□□□ -0.56
PCNX4-210ENST00000555740 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
PCNX4-210ENST00000555740 ABCC3O15438 1527 aa11.53□□□□□ -0.56
PCNX4-210ENST00000555740 MROH2AA6NES4 1674 aa11.51□□□□□ -0.57
PCNX4-210ENST00000555740 SPHKAPQ2M3C7 1700 aa11.51□□□□□ -0.57
PCNX4-210ENST00000555740 RPRD2Q5VT52 1461 aaKnown RBP11.49□□□□□ -0.57
PCNX4-210ENST00000555740 TRPM2O94759 1503 aa11.48□□□□□ -0.57
PCNX4-210ENST00000555740 NUP155O75694 1391 aa11.48□□□□□ -0.57
PCNX4-210ENST00000555740 NEURL4Q96JN8 1562 aa11.48□□□□□ -0.57
PCNX4-210ENST00000555740 KANK1Q14678 1352 aa11.47□□□□□ -0.57
PCNX4-210ENST00000555740 VSIG10Q8N0Z9 540 aa11.47□□□□□ -0.57
PCNX4-210ENST00000555740 ARHGAP31Q2M1Z3 1444 aa11.47□□□□□ -0.57
PCNX4-210ENST00000555740 TPRNQ4KMQ1 711 aa11.46□□□□□ -0.57
PCNX4-210ENST00000555740 CLTCQ00610 1675 aaKnown RBP11.46□□□□□ -0.58
PCNX4-210ENST00000555740 SPOCK2Q92563 424 aa11.46□□□□□ -0.58
PCNX4-210ENST00000555740 MPHOSPH9Q99550 1183 aa11.46□□□□□ -0.58
PCNX4-210ENST00000555740 ANKRD30BQ9BXX2 1392 aa11.45□□□□□ -0.58
PCNX4-210ENST00000555740 PTPRTO14522 1441 aa11.45□□□□□ -0.58
PCNX4-210ENST00000555740 TSHZ2Q9NRE2 1034 aa11.45□□□□□ -0.58
PCNX4-210ENST00000555740 PIK3C2BO00750 1634 aa11.45□□□□□ -0.58
PCNX4-210ENST00000555740 FER1L4A9Z1Z3 1794 aa11.44□□□□□ -0.58
PCNX4-210ENST00000555740 PREX1Q8TCU6 1659 aa11.44□□□□□ -0.58
PCNX4-210ENST00000555740 CCER1Q8TC90 406 aaPredicted RBP11.44□□□□□ -0.58
PCNX4-210ENST00000555740 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
PCNX4-210ENST00000555740 KIF3BO15066 747 aa11.43□□□□□ -0.58
PCNX4-210ENST00000555740 TRIM52Q96A61 297 aa11.43□□□□□ -0.58
PCNX4-210ENST00000555740 ADAMTSL3P82987 1691 aa11.42□□□□□ -0.58
PCNX4-210ENST00000555740 PLA2R1Q13018 1463 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms