RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 PHF23Q9BUL5 403 aaPredicted RBP13.65□□□□□ -0.22
NEK9-206ENST00000555537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.65□□□□□ -0.22
NEK9-206ENST00000555537 PLEKHH2Q8IVE3 1493 aa13.65□□□□□ -0.22
NEK9-206ENST00000555537 TNRQ92752 1358 aa13.64□□□□□ -0.23
NEK9-206ENST00000555537 NEURL4Q96JN8 1562 aa13.63□□□□□ -0.23
NEK9-206ENST00000555537 DHX29Q7Z478 1369 aaKnown RBP13.63□□□□□ -0.23
NEK9-206ENST00000555537 MTUS2Q5JR59 1369 aa13.62□□□□□ -0.23
NEK9-206ENST00000555537 CPS1P31327 1500 aa13.62□□□□□ -0.23
NEK9-206ENST00000555537 ADGBQ8N7X0 1667 aa13.62□□□□□ -0.23
NEK9-206ENST00000555537 WASHC2CQ9Y4E1 1318 aa13.62□□□□□ -0.23
NEK9-206ENST00000555537 MBD5Q9P267 1494 aa13.61□□□□□ -0.23
NEK9-206ENST00000555537 THEMISQ8N1K5 641 aaPredicted RBP13.61□□□□□ -0.23
NEK9-206ENST00000555537 POLR1AO95602 1720 aaPredicted RBP13.6□□□□□ -0.23
NEK9-206ENST00000555537 ALKQ9UM73 1620 aa13.6□□□□□ -0.23
NEK9-206ENST00000555537 VWDEQ8N2E2 1590 aa13.59□□□□□ -0.23
NEK9-206ENST00000555537 RTEL1-TNFRSF6BF6WH68 1400 aa13.58□□□□□ -0.24
NEK9-206ENST00000555537 NPHP4O75161 1426 aaPredicted RBP13.58□□□□□ -0.24
NEK9-206ENST00000555537 MIA2Q96PC5 1412 aa13.58□□□□□ -0.24
NEK9-206ENST00000555537 PZPP20742 1482 aa13.57□□□□□ -0.24
NEK9-206ENST00000555537 RGS17Q9UGC6 210 aaPredicted RBP13.56□□□□□ -0.24
NEK9-206ENST00000555537 TIAM1Q13009 1591 aa13.56□□□□□ -0.24
NEK9-206ENST00000555537 UGGT1Q9NYU2 1555 aa13.55□□□□□ -0.24
NEK9-206ENST00000555537 MED14O60244 1454 aa13.54□□□□□ -0.24
NEK9-206ENST00000555537 KDM5DQ9BY66 1539 aa13.54□□□□□ -0.24
NEK9-206ENST00000555537 FAM135AQ9P2D6 1515 aa13.54□□□□□ -0.24
NEK9-206ENST00000555537 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
NEK9-206ENST00000555537 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
NEK9-206ENST00000555537 NLRP1Q9C000 1473 aa13.52□□□□□ -0.25
NEK9-206ENST00000555537 IQGAP1P46940 1657 aa13.5□□□□□ -0.25
NEK9-206ENST00000555537 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
NEK9-206ENST00000555537 CCDC141Q6ZP82 1450 aa13.5□□□□□ -0.25
NEK9-206ENST00000555537 TSPY4P0CV99 314 aa13.49□□□□□ -0.25
NEK9-206ENST00000555537 TSPY10P0CW01 314 aa13.49□□□□□ -0.25
NEK9-206ENST00000555537 RSPH4AQ5TD94 716 aa13.49□□□□□ -0.25
NEK9-206ENST00000555537 CAMSAP2Q08AD1 1489 aa13.48□□□□□ -0.25
NEK9-206ENST00000555537 CEP162Q5TB80 1403 aa13.48□□□□□ -0.25
NEK9-206ENST00000555537 LTKP29376 864 aa13.48□□□□□ -0.25
NEK9-206ENST00000555537 EHBP1L1Q8N3D4 1523 aa13.48□□□□□ -0.25
NEK9-206ENST00000555537 TXNDC2Q86VQ3 553 aa13.47□□□□□ -0.25
NEK9-206ENST00000555537 POTEAQ6S8J7 498 aa13.46□□□□□ -0.25
NEK9-206ENST00000555537 NCOA2Q15596 1464 aa13.46□□□□□ -0.25
NEK9-206ENST00000555537 CFAP65Q6ZU64 1925 aaKnown RBP13.45□□□□□ -0.26
NEK9-206ENST00000555537 RNF17Q9BXT8 1623 aaKnown RBP13.44□□□□□ -0.26
NEK9-206ENST00000555537 RBM33Q96EV2 1170 aaKnown RBP13.44□□□□□ -0.26
NEK9-206ENST00000555537 ABCC3O15438 1527 aa13.44□□□□□ -0.26
NEK9-206ENST00000555537 ERVK-7P63135 1459 aa13.43□□□□□ -0.26
NEK9-206ENST00000555537 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
NEK9-206ENST00000555537 SCAF11Q99590 1463 aaKnown RBP13.41□□□□□ -0.26
NEK9-206ENST00000555537 SYNMO15061 1565 aa13.41□□□□□ -0.26
NEK9-206ENST00000555537 UBR1Q8IWV7 1749 aa13.4□□□□□ -0.26
NEK9-206ENST00000555537 XIRP1Q702N8 1843 aaKnown RBP13.4□□□□□ -0.26
NEK9-206ENST00000555537 ARHGEF5Q12774 1597 aa13.4□□□□□ -0.26
NEK9-206ENST00000555537 EID1Q9Y6B2 187 aa13.39□□□□□ -0.27
NEK9-206ENST00000555537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.27
NEK9-206ENST00000555537 CEP152O94986 1710 aa13.38□□□□□ -0.27
NEK9-206ENST00000555537 FAM135BQ49AJ0 1406 aa13.38□□□□□ -0.27
NEK9-206ENST00000555537 ARHGAP23Q9P227 1491 aa13.37□□□□□ -0.27
NEK9-206ENST00000555537 PROSER2Q86WR7 435 aaPredicted RBP13.37□□□□□ -0.27
NEK9-206ENST00000555537 SLC26A8Q96RN1 970 aa13.37□□□□□ -0.27
NEK9-206ENST00000555537 MROH1Q8NDA8 1641 aa13.37□□□□□ -0.27
NEK9-206ENST00000555537 TMEM94Q12767 1356 aa13.36□□□□□ -0.27
NEK9-206ENST00000555537 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
NEK9-206ENST00000555537 SLIT1O75093 1534 aa13.35□□□□□ -0.27
NEK9-206ENST00000555537 KANK4Q5T7N3 995 aaPredicted RBP13.35□□□□□ -0.27
NEK9-206ENST00000555537 RRP7BPQ9NSQ0 103 aa13.35□□□□□ -0.27
NEK9-206ENST00000555537 KCNA6P17658 529 aa13.34□□□□□ -0.27
NEK9-206ENST00000555537 TMEM2Q9UHN6 1383 aa13.33□□□□□ -0.27
NEK9-206ENST00000555537 MAST1Q9Y2H9 1570 aa13.33□□□□□ -0.28
NEK9-206ENST00000555537 IDI1Q13907 227 aa13.33□□□□□ -0.28
NEK9-206ENST00000555537 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
NEK9-206ENST00000555537 PIK3C2BO00750 1634 aa13.31□□□□□ -0.28
NEK9-206ENST00000555537 ROBO1Q9Y6N7 1651 aa13.31□□□□□ -0.28
NEK9-206ENST00000555537 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
NEK9-206ENST00000555537 BCANQ96GW7 911 aa13.31□□□□□ -0.28
NEK9-206ENST00000555537 SETD1AO15047 1707 aaKnown RBP13.3□□□□□ -0.28
NEK9-206ENST00000555537 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
NEK9-206ENST00000555537 DUOX2Q9NRD8 1548 aa13.29□□□□□ -0.28
NEK9-206ENST00000555537 SLAIN2Q9P270 581 aa13.29□□□□□ -0.28
NEK9-206ENST00000555537 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
NEK9-206ENST00000555537 KIF15Q9NS87 1388 aa13.28□□□□□ -0.28
NEK9-206ENST00000555537 MYOM3Q5VTT5 1437 aa13.27□□□□□ -0.29
NEK9-206ENST00000555537 TET3O43151 1660 aa13.27□□□□□ -0.29
NEK9-206ENST00000555537 EFCAB6Q5THR3 1501 aa13.26□□□□□ -0.29
NEK9-206ENST00000555537 TRIM52Q96A61 297 aa13.26□□□□□ -0.29
NEK9-206ENST00000555537 CHIC2Q9UKJ5 165 aa13.26□□□□□ -0.29
NEK9-206ENST00000555537 PRDM15P57071 1507 aaPredicted RBP13.25□□□□□ -0.29
NEK9-206ENST00000555537 ABCC5O15440 1437 aa13.25□□□□□ -0.29
NEK9-206ENST00000555537 MSH6P52701 1360 aa13.25□□□□□ -0.29
NEK9-206ENST00000555537 LOC105371045A0A1W2PR82 267 aa13.25□□□□□ -0.29
NEK9-206ENST00000555537 UPF1Q92900 1129 aaKnown RBP eCLIP13.25□□□□□ -0.29
NEK9-206ENST00000555537 KANK1Q14678 1352 aa13.24□□□□□ -0.29
NEK9-206ENST00000555537 JCADQ9P266 1359 aa13.24□□□□□ -0.29
NEK9-206ENST00000555537 PHLPP1O60346 1717 aa13.24□□□□□ -0.29
NEK9-206ENST00000555537 ERBINQ96RT1 1412 aa13.22□□□□□ -0.29
NEK9-206ENST00000555537 MEX3CQ5U5Q3 659 aaKnown RBP13.22□□□□□ -0.29
NEK9-206ENST00000555537 VPS8Q8N3P4 1428 aa13.22□□□□□ -0.29
NEK9-206ENST00000555537 LRP6O75581 1613 aa13.21□□□□□ -0.3
NEK9-206ENST00000555537 NUTM2DQ5VT03 806 aaPredicted RBP13.2□□□□□ -0.3
NEK9-206ENST00000555537 C14orf37Q86TY3 774 aa13.2□□□□□ -0.3
NEK9-206ENST00000555537 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms