RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 L3MBTL2Q969R5 705 aa14.63□□□□□ -0.07
NEK9-205ENST00000555405 CFAP74Q9C0B2 1584 aa14.63□□□□□ -0.07
NEK9-205ENST00000555405 CLSPNQ9HAW4 1339 aa14.62□□□□□ -0.07
NEK9-205ENST00000555405 GCC2Q8IWJ2 1684 aa14.61□□□□□ -0.07
NEK9-205ENST00000555405 PZPP20742 1482 aa14.61□□□□□ -0.07
NEK9-205ENST00000555405 MLH3Q9UHC1 1453 aa14.61□□□□□ -0.07
NEK9-205ENST00000555405 FBXO31Q5XUX0 539 aaPredicted RBP14.6□□□□□ -0.07
NEK9-205ENST00000555405 DCAF11Q8TEB1 546 aa14.6□□□□□ -0.07
NEK9-205ENST00000555405 NUTM2DQ5VT03 806 aaPredicted RBP14.6□□□□□ -0.07
NEK9-205ENST00000555405 STAG3Q9UJ98 1225 aa14.59□□□□□ -0.07
NEK9-205ENST00000555405 ERBINQ96RT1 1412 aa14.59□□□□□ -0.07
NEK9-205ENST00000555405 KIDINS220Q9ULH0 1771 aa14.59□□□□□ -0.07
NEK9-205ENST00000555405 CFAP65Q6ZU64 1925 aaKnown RBP14.59□□□□□ -0.07
NEK9-205ENST00000555405 CEBPAP49715 358 aaPredicted RBP14.59□□□□□ -0.07
NEK9-205ENST00000555405 ACIN1Q9UKV3 1341 aaKnown RBP14.58□□□□□ -0.07
NEK9-205ENST00000555405 HECW2Q9P2P5 1572 aa14.58□□□□□ -0.08
NEK9-205ENST00000555405 ANKRD30BQ9BXX2 1392 aa14.58□□□□□ -0.08
NEK9-205ENST00000555405 PPRC1Q5VV67 1664 aaKnown RBP14.57□□□□□ -0.08
NEK9-205ENST00000555405 MAST1Q9Y2H9 1570 aa14.57□□□□□ -0.08
NEK9-205ENST00000555405 ATP10AO60312 1499 aa14.56□□□□□ -0.08
NEK9-205ENST00000555405 FAM135AQ9P2D6 1515 aa14.56□□□□□ -0.08
NEK9-205ENST00000555405 PPP1R15AO75807 674 aaPredicted RBP14.55□□□□□ -0.08
NEK9-205ENST00000555405 INO80Q9ULG1 1556 aaPredicted RBP14.54□□□□□ -0.08
NEK9-205ENST00000555405 CCDC144AA2RUR9 1427 aa14.54□□□□□ -0.08
NEK9-205ENST00000555405 PLXNC1O60486 1568 aa14.54□□□□□ -0.08
NEK9-205ENST00000555405 KDM5CP41229 1560 aa14.53□□□□□ -0.08
NEK9-205ENST00000555405 ABCA6Q8N139 1617 aa14.53□□□□□ -0.08
NEK9-205ENST00000555405 RICTORQ6R327 1708 aa14.52□□□□□ -0.09
NEK9-205ENST00000555405 POLR3GLQ9BT43 218 aa14.52□□□□□ -0.09
NEK9-205ENST00000555405 DIP2CQ9Y2E4 1556 aa14.51□□□□□ -0.09
NEK9-205ENST00000555405 FRMPD1Q5SYB0 1578 aa14.51□□□□□ -0.09
NEK9-205ENST00000555405 BCANQ96GW7 911 aa14.5□□□□□ -0.09
NEK9-205ENST00000555405 NBPF8Q3BBV2 869 aa14.48□□□□□ -0.09
NEK9-205ENST00000555405 MAGI2Q86UL8 1455 aa14.47□□□□□ -0.09
NEK9-205ENST00000555405 IDI1Q13907 227 aa14.47□□□□□ -0.09
NEK9-205ENST00000555405 ZNF316A6NFI3 1004 aaPredicted RBP14.45□□□□□ -0.1
NEK9-205ENST00000555405 TIMELESSQ9UNS1 1208 aa14.44□□□□□ -0.1
NEK9-205ENST00000555405 CNGB1Q14028 1251 aaPredicted RBP14.44□□□□□ -0.1
NEK9-205ENST00000555405 PLA2R1Q13018 1463 aa14.43□□□□□ -0.1
NEK9-205ENST00000555405 NPATQ14207 1427 aa14.43□□□□□ -0.1
NEK9-205ENST00000555405 ZMYM3Q14202 1370 aa14.42□□□□□ -0.1
NEK9-205ENST00000555405 RPRD2Q5VT52 1461 aaKnown RBP14.42□□□□□ -0.1
NEK9-205ENST00000555405 UGGT1Q9NYU2 1555 aa14.41□□□□□ -0.1
NEK9-205ENST00000555405 CARD11Q9BXL7 1154 aa14.41□□□□□ -0.1
NEK9-205ENST00000555405 ZMYM4Q5VZL5 1548 aa14.41□□□□□ -0.1
NEK9-205ENST00000555405 UNC13BO14795 1591 aa14.4□□□□□ -0.1
NEK9-205ENST00000555405 NBPF1Q3BBV0 1214 aa14.4□□□□□ -0.1
NEK9-205ENST00000555405 CEP152O94986 1710 aa14.39□□□□□ -0.11
NEK9-205ENST00000555405 ABCC3O15438 1527 aa14.38□□□□□ -0.11
NEK9-205ENST00000555405 PRDM15P57071 1507 aaPredicted RBP14.38□□□□□ -0.11
NEK9-205ENST00000555405 KDM5DQ9BY66 1539 aa14.38□□□□□ -0.11
NEK9-205ENST00000555405 IQGAP3Q86VI3 1631 aa14.38□□□□□ -0.11
NEK9-205ENST00000555405 ARHGEF40Q8TER5 1519 aa14.37□□□□□ -0.11
NEK9-205ENST00000555405 HSPA5P11021 654 aaKnown RBP14.37□□□□□ -0.11
NEK9-205ENST00000555405 EIF4G2P78344 907 aaKnown RBP eCLIP14.36□□□□□ -0.11
NEK9-205ENST00000555405 CFAP70Q5T0N1 1121 aa14.36□□□□□ -0.11
NEK9-205ENST00000555405 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
NEK9-205ENST00000555405 SLC52A1Q9NWF4 448 aa14.36□□□□□ -0.11
NEK9-205ENST00000555405 MROH1Q8NDA8 1641 aa14.36□□□□□ -0.11
NEK9-205ENST00000555405 STK26Q9P289 416 aa14.36□□□□□ -0.11
NEK9-205ENST00000555405 ADGRF5Q8IZF2 1346 aa14.36□□□□□ -0.11
NEK9-205ENST00000555405 TMEM132EQ6IEE7 984 aa14.35□□□□□ -0.11
NEK9-205ENST00000555405 E9PCH4 1651 aa14.35□□□□□ -0.11
NEK9-205ENST00000555405 DDX10Q13206 875 aaKnown RBP14.34□□□□□ -0.11
NEK9-205ENST00000555405 EIF2AK4Q9P2K8 1649 aaKnown RBP14.34□□□□□ -0.11
NEK9-205ENST00000555405 SAFB2Q14151 953 aaKnown RBP eCLIP14.34□□□□□ -0.11
NEK9-205ENST00000555405 ROCK2O75116 1388 aaKnown RBP14.33□□□□□ -0.12
NEK9-205ENST00000555405 SIGLEC1Q9BZZ2 1709 aa14.33□□□□□ -0.12
NEK9-205ENST00000555405 DIEXFQ68CQ4 756 aaKnown RBP14.33□□□□□ -0.12
NEK9-205ENST00000555405 EFCAB6Q5THR3 1501 aa14.32□□□□□ -0.12
NEK9-205ENST00000555405 TET3O43151 1660 aa14.31□□□□□ -0.12
NEK9-205ENST00000555405 TRAK1Q9UPV9 953 aa14.3□□□□□ -0.12
NEK9-205ENST00000555405 CLTCQ00610 1675 aaKnown RBP14.3□□□□□ -0.12
NEK9-205ENST00000555405 TNRQ92752 1358 aa14.3□□□□□ -0.12
NEK9-205ENST00000555405 DEPDC5O75140 1603 aa14.3□□□□□ -0.12
NEK9-205ENST00000555405 PTPRTO14522 1441 aa14.3□□□□□ -0.12
NEK9-205ENST00000555405 AGLP35573 1532 aa14.3□□□□□ -0.12
NEK9-205ENST00000555405 ST20-MTHFSA0A0A6YYL1 179 aa14.3□□□□□ -0.12
NEK9-205ENST00000555405 VGFO15240 615 aaPredicted RBP14.3□□□□□ -0.12
NEK9-205ENST00000555405 NOS1P29475 1434 aa14.29□□□□□ -0.12
NEK9-205ENST00000555405 RNF17Q9BXT8 1623 aaKnown RBP14.29□□□□□ -0.12
NEK9-205ENST00000555405 VWDEQ8N2E2 1590 aa14.28□□□□□ -0.12
NEK9-205ENST00000555405 CNTLNQ9NXG0 1405 aa14.28□□□□□ -0.12
NEK9-205ENST00000555405 TXNDC2Q86VQ3 553 aa14.28□□□□□ -0.12
NEK9-205ENST00000555405 CLTCL1P53675 1640 aa14.27□□□□□ -0.13
NEK9-205ENST00000555405 SLC26A8Q96RN1 970 aa14.26□□□□□ -0.13
NEK9-205ENST00000555405 CAMSAP1Q5T5Y3 1602 aa14.26□□□□□ -0.13
NEK9-205ENST00000555405 ERVK-7P63135 1459 aa14.25□□□□□ -0.13
NEK9-205ENST00000555405 TRPM2O94759 1503 aa14.25□□□□□ -0.13
NEK9-205ENST00000555405 SPATA31E1Q6ZUB1 1445 aa14.25□□□□□ -0.13
NEK9-205ENST00000555405 LMTK2Q8IWU2 1503 aa14.25□□□□□ -0.13
NEK9-205ENST00000555405 EID1Q9Y6B2 187 aa14.24□□□□□ -0.13
NEK9-205ENST00000555405 SPHKAPQ2M3C7 1700 aa14.24□□□□□ -0.13
NEK9-205ENST00000555405 ARHGAP31Q2M1Z3 1444 aa14.24□□□□□ -0.13
NEK9-205ENST00000555405 USP47Q96K76 1375 aa14.24□□□□□ -0.13
NEK9-205ENST00000555405 HSPA2P54652 639 aa14.23□□□□□ -0.13
NEK9-205ENST00000555405 C11orf95C9JLR9 678 aaPredicted RBP14.22□□□□□ -0.13
NEK9-205ENST00000555405 THEMISQ8N1K5 641 aaPredicted RBP14.22□□□□□ -0.13
NEK9-205ENST00000555405 HDGFP51858 240 aaKnown RBP14.22□□□□□ -0.13
NEK9-205ENST00000555405 PRAG1Q86YV5 1406 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms