RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 NCKAP5LQ9HCH0 1330 aa7.28□□□□□ -1.24
KTN1-220ENST00000555172 ZDHHC16Q969W1 377 aa7.28□□□□□ -1.24
KTN1-220ENST00000555172 ANO8Q9HCE9 1232 aaPredicted RBP7.28□□□□□ -1.24
KTN1-220ENST00000555172 BCAMP50895 628 aa7.27□□□□□ -1.25
KTN1-220ENST00000555172 SPRYD3Q8NCJ5 442 aa7.27□□□□□ -1.25
KTN1-220ENST00000555172 JPH4Q96JJ6 628 aa7.26□□□□□ -1.25
KTN1-220ENST00000555172 COL9A1P20849 921 aa7.25□□□□□ -1.25
KTN1-220ENST00000555172 NBPF3Q9H094 633 aa7.25□□□□□ -1.25
KTN1-220ENST00000555172 TRAF7Q6Q0C0 670 aa7.22□□□□□ -1.25
KTN1-220ENST00000555172 ANKK1Q8NFD2 765 aa7.22□□□□□ -1.25
KTN1-220ENST00000555172 PCDHGA10Q9Y5H3 936 aa7.22□□□□□ -1.25
KTN1-220ENST00000555172 ITGBL1O95965 494 aaPredicted RBP7.21□□□□□ -1.26
KTN1-220ENST00000555172 LARP6Q9BRS8 491 aaKnown RBP7.21□□□□□ -1.26
KTN1-220ENST00000555172 LCE2BO14633 110 aa7.2□□□□□ -1.26
KTN1-220ENST00000555172 MAP3K9P80192 1104 aa7.2□□□□□ -1.26
KTN1-220ENST00000555172 EMILIN3Q9NT22 766 aa7.2□□□□□ -1.26
KTN1-220ENST00000555172 WBP1LQ9NX94 342 aa7.2□□□□□ -1.26
KTN1-220ENST00000555172 RABGEF1Q9UJ41 708 aa7.2□□□□□ -1.26
KTN1-220ENST00000555172 PDE4AP27815 886 aa7.2□□□□□ -1.26
KTN1-220ENST00000555172 PPP1R3GB7ZBB8 358 aa7.19□□□□□ -1.26
KTN1-220ENST00000555172 KIAA1468Q9P260 1216 aa7.19□□□□□ -1.26
KTN1-220ENST00000555172 SEPT9Q9UHD8 586 aaPredicted RBP7.19□□□□□ -1.26
KTN1-220ENST00000555172 KDM2AQ9Y2K7 1162 aa7.19□□□□□ -1.26
KTN1-220ENST00000555172 SOWAHBA6NEL2 793 aa7.19□□□□□ -1.26
KTN1-220ENST00000555172 ZFRQ96KR1 1074 aaKnown RBP7.17□□□□□ -1.26
KTN1-220ENST00000555172 DDX27Q96GQ7 796 aaKnown RBP7.17□□□□□ -1.26
KTN1-220ENST00000555172 TSHZ2Q9NRE2 1034 aa7.17□□□□□ -1.26
KTN1-220ENST00000555172 KCNC4Q03721 635 aa7.15□□□□□ -1.26
KTN1-220ENST00000555172 GTF3C3Q9Y5Q9 886 aa7.15□□□□□ -1.26
KTN1-220ENST00000555172 HOMEZQ8IX15 550 aa7.13□□□□□ -1.27
KTN1-220ENST00000555172 DNAJC5Q9H3Z4 198 aa7.13□□□□□ -1.27
KTN1-220ENST00000555172 GTPBP6O43824 516 aaPredicted RBP7.13□□□□□ -1.27
KTN1-220ENST00000555172 GFRA3O60609 400 aa7.13□□□□□ -1.27
KTN1-220ENST00000555172 TYW1BQ6NUM6 668 aa7.13□□□□□ -1.27
KTN1-220ENST00000555172 LAPTM4BQ86VI4 370 aa7.12□□□□□ -1.27
KTN1-220ENST00000555172 RBM33Q96EV2 1170 aaKnown RBP7.11□□□□□ -1.27
KTN1-220ENST00000555172 MFSD10Q14728 455 aa7.11□□□□□ -1.27
KTN1-220ENST00000555172 C6orf132Q5T0Z8 1188 aa7.11□□□□□ -1.27
KTN1-220ENST00000555172 CADPS2Q86UW7 1296 aa7.11□□□□□ -1.27
KTN1-220ENST00000555172 HPS5Q9UPZ3 1129 aa7.11□□□□□ -1.27
KTN1-220ENST00000555172 PHF14O94880 888 aa7.1□□□□□ -1.27
KTN1-220ENST00000555172 ZNF787Q6DD87 383 aa7.1□□□□□ -1.27
KTN1-220ENST00000555172 RYDENQ9NUL5 291 aaKnown RBP7.09□□□□□ -1.27
KTN1-220ENST00000555172 NYAP1Q6ZVC0 841 aa7.09□□□□□ -1.27
KTN1-220ENST00000555172 FBXW7Q969H0 707 aa7.09□□□□□ -1.27
KTN1-220ENST00000555172 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.09□□□□□ -1.27
KTN1-220ENST00000555172 TRIM6-TRIM34B2RNG4 842 aa7.08□□□□□ -1.28
KTN1-220ENST00000555172 TSR3Q9UJK0 312 aaKnown RBP7.08□□□□□ -1.28
KTN1-220ENST00000555172 NRG2O14511 850 aaPredicted RBP7.08□□□□□ -1.28
KTN1-220ENST00000555172 FAM98CQ17RN3 349 aaKnown RBP7.07□□□□□ -1.28
KTN1-220ENST00000555172 LRCH3Q96II8 777 aa7.07□□□□□ -1.28
KTN1-220ENST00000555172 DDX12PQ92771 950 aa7.06□□□□□ -1.28
KTN1-220ENST00000555172 PRKD2Q9BZL6 878 aa7.06□□□□□ -1.28
KTN1-220ENST00000555172 DPYSL4O14531 572 aa7.06□□□□□ -1.28
KTN1-220ENST00000555172 SMAPO00193 183 aa7.05□□□□□ -1.28
KTN1-220ENST00000555172 NBR1Q14596 966 aa7.05□□□□□ -1.28
KTN1-220ENST00000555172 TSKSQ9UJT2 592 aa7.05□□□□□ -1.28
KTN1-220ENST00000555172 ONECUT3O60422 494 aaPredicted RBP7.04□□□□□ -1.28
KTN1-220ENST00000555172 TSR1Q2NL82 804 aaKnown RBP7.04□□□□□ -1.28
KTN1-220ENST00000555172 TJAP1Q5JTD0 557 aa7.04□□□□□ -1.28
KTN1-220ENST00000555172 ZNF775Q96BV0 537 aaPredicted RBP7.04□□□□□ -1.28
KTN1-220ENST00000555172 C3orf80F5H4A9 247 aa7.02□□□□□ -1.29
KTN1-220ENST00000555172 PPP4CP60510 307 aa7.02□□□□□ -1.29
KTN1-220ENST00000555172 EPAS1Q99814 870 aa7.02□□□□□ -1.29
KTN1-220ENST00000555172 TMEM132AQ24JP5 1023 aa7.02□□□□□ -1.29
KTN1-220ENST00000555172 PPP1R18Q6NYC8 613 aa7.02□□□□□ -1.29
KTN1-220ENST00000555172 ZNF516Q92618 1163 aa7.02□□□□□ -1.29
KTN1-220ENST00000555172 SAMD7Q7Z3H4 446 aa7.01□□□□□ -1.29
KTN1-220ENST00000555172 FAM198AQ9UFP1 575 aa7□□□□□ -1.29
KTN1-220ENST00000555172 MTRQ99707 1265 aa7□□□□□ -1.29
KTN1-220ENST00000555172 NKX2-3Q8TAU0 364 aa6.99□□□□□ -1.29
KTN1-220ENST00000555172 MAP3K7O43318 606 aa6.98□□□□□ -1.29
KTN1-220ENST00000555172 CAMK2BQ13554 666 aa6.98□□□□□ -1.29
KTN1-220ENST00000555172 PACS2Q86VP3 889 aa6.98□□□□□ -1.29
KTN1-220ENST00000555172 PODXL2Q9NZ53 605 aa6.98□□□□□ -1.29
KTN1-220ENST00000555172 RANGAP1P46060 587 aaPredicted RBP6.97□□□□□ -1.29
KTN1-220ENST00000555172 PRIM1P49642 420 aaKnown RBP6.97□□□□□ -1.29
KTN1-220ENST00000555172 C14orf37Q86TY3 774 aa6.97□□□□□ -1.29
KTN1-220ENST00000555172 EN1Q05925 392 aaPredicted RBP6.95□□□□□ -1.3
KTN1-220ENST00000555172 CDCA7LQ96GN5 454 aa6.95□□□□□ -1.3
KTN1-220ENST00000555172 PDZRN3Q9UPQ7 1066 aa6.95□□□□□ -1.3
KTN1-220ENST00000555172 IL21Q9HBE4 155 aa6.95□□□□□ -1.3
KTN1-220ENST00000555172 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.95□□□□□ -1.3
KTN1-220ENST00000555172 V9GY48 417 aaPredicted RBP6.95□□□□□ -1.3
KTN1-220ENST00000555172 RNF40O75150 1001 aa6.94□□□□□ -1.3
KTN1-220ENST00000555172 APLP1P51693 650 aa6.94□□□□□ -1.3
KTN1-220ENST00000555172 PNMA3Q9UL41 463 aa6.93□□□□□ -1.3
KTN1-220ENST00000555172 PRSS12P56730 875 aa6.92□□□□□ -1.3
KTN1-220ENST00000555172 TATDN2Q93075 761 aa6.92□□□□□ -1.3
KTN1-220ENST00000555172 COPS2P61201 443 aa6.91□□□□□ -1.3
KTN1-220ENST00000555172 ERICH6Q7L0X2 663 aa6.91□□□□□ -1.3
KTN1-220ENST00000555172 NUDT18Q6ZVK8 323 aa6.89□□□□□ -1.31
KTN1-220ENST00000555172 CDHR5Q9HBB8 845 aa6.89□□□□□ -1.31
KTN1-220ENST00000555172 POTECB2RU33 542 aa6.89□□□□□ -1.31
KTN1-220ENST00000555172 GRXCR2A6NFK2 248 aa6.88□□□□□ -1.31
KTN1-220ENST00000555172 P3H3Q8IVL6 736 aa6.88□□□□□ -1.31
KTN1-220ENST00000555172 WDR70Q9NW82 654 aa6.88□□□□□ -1.31
KTN1-220ENST00000555172 PDIA6Q15084 440 aa6.88□□□□□ -1.31
KTN1-220ENST00000555172 TRIM67Q6ZTA4 783 aa6.88□□□□□ -1.31
KTN1-220ENST00000555172 EMID1Q96A84 441 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms