RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 PRKRIP1Q9H875 184 aaPredicted RBP20.48■□□□□ 0.87
XRCC3-211ENST00000555055 BCORL1Q5H9F3 1711 aa20.48■□□□□ 0.87
XRCC3-211ENST00000555055 SPAG9O60271 1321 aaKnown RBP20.47■□□□□ 0.87
XRCC3-211ENST00000555055 CCDC144AA2RUR9 1427 aa20.47■□□□□ 0.87
XRCC3-211ENST00000555055 PLA2R1Q13018 1463 aa20.47■□□□□ 0.87
XRCC3-211ENST00000555055 NBPF1Q3BBV0 1214 aa20.47■□□□□ 0.87
XRCC3-211ENST00000555055 ABCC1P33527 1531 aa20.45■□□□□ 0.86
XRCC3-211ENST00000555055 WDR7Q9Y4E6 1490 aa20.44■□□□□ 0.86
XRCC3-211ENST00000555055 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
XRCC3-211ENST00000555055 MAST1Q9Y2H9 1570 aa20.43■□□□□ 0.86
XRCC3-211ENST00000555055 FKBP8Q14318 412 aa20.42■□□□□ 0.86
XRCC3-211ENST00000555055 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
XRCC3-211ENST00000555055 BCL11AQ9H165 835 aa20.42■□□□□ 0.86
XRCC3-211ENST00000555055 ROCK2O75116 1388 aaKnown RBP20.42■□□□□ 0.86
XRCC3-211ENST00000555055 KDM5CP41229 1560 aa20.41■□□□□ 0.86
XRCC3-211ENST00000555055 ASXL2Q76L83 1435 aa20.41■□□□□ 0.86
XRCC3-211ENST00000555055 FANCAO15360 1455 aa20.4■□□□□ 0.86
XRCC3-211ENST00000555055 DUOX2Q9NRD8 1548 aa20.4■□□□□ 0.86
XRCC3-211ENST00000555055 PLXNC1O60486 1568 aa20.39■□□□□ 0.86
XRCC3-211ENST00000555055 UHRF1BP1Q6BDS2 1440 aa20.39■□□□□ 0.85
XRCC3-211ENST00000555055 SCAPERQ9BY12 1400 aa20.39■□□□□ 0.85
XRCC3-211ENST00000555055 UNC13BO14795 1591 aa20.39■□□□□ 0.85
XRCC3-211ENST00000555055 RALGAPBQ86X10 1494 aa20.39■□□□□ 0.85
XRCC3-211ENST00000555055 KIF3BO15066 747 aa20.37■□□□□ 0.85
XRCC3-211ENST00000555055 A2MP01023 1474 aa20.35■□□□□ 0.85
XRCC3-211ENST00000555055 NEFLP07196 543 aa20.35■□□□□ 0.85
XRCC3-211ENST00000555055 ERBINQ96RT1 1412 aa20.34■□□□□ 0.85
XRCC3-211ENST00000555055 IRX6P78412 446 aaPredicted RBP20.34■□□□□ 0.85
XRCC3-211ENST00000555055 IQGAP3Q86VI3 1631 aa20.33■□□□□ 0.85
XRCC3-211ENST00000555055 NPM1P06748 294 aaKnown RBP eCLIP20.33■□□□□ 0.85
XRCC3-211ENST00000555055 DHX29Q7Z478 1369 aaKnown RBP20.33■□□□□ 0.85
XRCC3-211ENST00000555055 ADGRL1O94910 1474 aa20.33■□□□□ 0.85
XRCC3-211ENST00000555055 ZFYVE16Q7Z3T8 1539 aa20.33■□□□□ 0.85
XRCC3-211ENST00000555055 PRAG1Q86YV5 1406 aa20.33■□□□□ 0.84
XRCC3-211ENST00000555055 POLR1AO95602 1720 aaPredicted RBP20.29■□□□□ 0.84
XRCC3-211ENST00000555055 RBM19Q9Y4C8 960 aaKnown RBP20.27■□□□□ 0.84
XRCC3-211ENST00000555055 MAGI2Q86UL8 1455 aa20.27■□□□□ 0.84
XRCC3-211ENST00000555055 ATP7AQ04656 1500 aa20.26■□□□□ 0.83
XRCC3-211ENST00000555055 ABCA9Q8IUA7 1624 aa20.26■□□□□ 0.83
XRCC3-211ENST00000555055 E9PCH4 1651 aa20.24■□□□□ 0.83
XRCC3-211ENST00000555055 TRPM1Q7Z4N2 1603 aa20.24■□□□□ 0.83
XRCC3-211ENST00000555055 RTEL1-TNFRSF6BF6WH68 1400 aa20.22■□□□□ 0.83
XRCC3-211ENST00000555055 ATP10AO60312 1499 aa20.22■□□□□ 0.83
XRCC3-211ENST00000555055 RAPGEF3O95398 923 aa20.21■□□□□ 0.83
XRCC3-211ENST00000555055 UGGT1Q9NYU2 1555 aa20.21■□□□□ 0.83
XRCC3-211ENST00000555055 GGT6Q6P531 493 aa20.21■□□□□ 0.83
XRCC3-211ENST00000555055 DISP3Q9P2K9 1392 aa20.21■□□□□ 0.83
XRCC3-211ENST00000555055 ARAP3Q8WWN8 1544 aa20.2■□□□□ 0.82
XRCC3-211ENST00000555055 CYB5RLQ6IPT4 315 aa20.2■□□□□ 0.82
XRCC3-211ENST00000555055 CD109Q6YHK3 1445 aa20.19■□□□□ 0.82
XRCC3-211ENST00000555055 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
XRCC3-211ENST00000555055 INO80Q9ULG1 1556 aaPredicted RBP20.19■□□□□ 0.82
XRCC3-211ENST00000555055 TESK2Q96S53 571 aa20.18■□□□□ 0.82
XRCC3-211ENST00000555055 CHGAP10645 457 aaKnown RBP20.16■□□□□ 0.82
XRCC3-211ENST00000555055 CC2D1BQ5T0F9 858 aaKnown RBP20.16■□□□□ 0.82
XRCC3-211ENST00000555055 CFAP65Q6ZU64 1925 aaKnown RBP20.16■□□□□ 0.82
XRCC3-211ENST00000555055 FANCIQ9NVI1 1328 aa20.15■□□□□ 0.82
XRCC3-211ENST00000555055 KANK1Q14678 1352 aa20.15■□□□□ 0.82
XRCC3-211ENST00000555055 TMC1Q8TDI8 760 aa20.15■□□□□ 0.82
XRCC3-211ENST00000555055 ARID4BQ4LE39 1312 aaPredicted RBP20.14■□□□□ 0.82
XRCC3-211ENST00000555055 CLTCL1P53675 1640 aa20.14■□□□□ 0.82
XRCC3-211ENST00000555055 KIDINS220Q9ULH0 1771 aa20.13■□□□□ 0.81
XRCC3-211ENST00000555055 ERICH6BQ5W0A0 696 aa20.13■□□□□ 0.81
XRCC3-211ENST00000555055 SALL2Q9Y467 1007 aaPredicted RBP20.13■□□□□ 0.81
XRCC3-211ENST00000555055 GPRASP1Q5JY77 1395 aa20.12■□□□□ 0.81
XRCC3-211ENST00000555055 PANK3Q9H999 370 aa20.11■□□□□ 0.81
XRCC3-211ENST00000555055 SPHKAPQ2M3C7 1700 aa20.1■□□□□ 0.81
XRCC3-211ENST00000555055 TRPM2O94759 1503 aa20.1■□□□□ 0.81
XRCC3-211ENST00000555055 CFAP70Q5T0N1 1121 aa20.1■□□□□ 0.81
XRCC3-211ENST00000555055 DEPDC5O75140 1603 aa20.1■□□□□ 0.81
XRCC3-211ENST00000555055 MROH1Q8NDA8 1641 aa20.1■□□□□ 0.81
XRCC3-211ENST00000555055 NUTM2DQ5VT03 806 aaPredicted RBP20.09■□□□□ 0.81
XRCC3-211ENST00000555055 ZNF518AQ6AHZ1 1483 aa20.09■□□□□ 0.81
XRCC3-211ENST00000555055 PRDM15P57071 1507 aaPredicted RBP20.09■□□□□ 0.81
XRCC3-211ENST00000555055 ADGRF5Q8IZF2 1346 aa20.09■□□□□ 0.81
XRCC3-211ENST00000555055 PNISRQ8TF01 805 aaKnown RBP20.08■□□□□ 0.81
XRCC3-211ENST00000555055 ZBED9Q6R2W3 1325 aa20.08■□□□□ 0.81
XRCC3-211ENST00000555055 PTPRTO14522 1441 aa20.08■□□□□ 0.81
XRCC3-211ENST00000555055 PER1O15534 1290 aaPredicted RBP20.07■□□□□ 0.8
XRCC3-211ENST00000555055 TET3O43151 1660 aa20.07■□□□□ 0.8
XRCC3-211ENST00000555055 TMF1P82094 1093 aa20.06■□□□□ 0.8
XRCC3-211ENST00000555055 COL17A1Q9UMD9 1497 aaPredicted RBP20.06■□□□□ 0.8
XRCC3-211ENST00000555055 POGZQ7Z3K3 1410 aa20.05■□□□□ 0.8
XRCC3-211ENST00000555055 MADDQ8WXG6 1647 aa20.05■□□□□ 0.8
XRCC3-211ENST00000555055 VWDEQ8N2E2 1590 aa20.04■□□□□ 0.8
XRCC3-211ENST00000555055 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
XRCC3-211ENST00000555055 CEP152O94986 1710 aa20.03■□□□□ 0.8
XRCC3-211ENST00000555055 EIF2AK4Q9P2K8 1649 aaKnown RBP20.03■□□□□ 0.8
XRCC3-211ENST00000555055 WASHC2CQ9Y4E1 1318 aa20.03■□□□□ 0.8
XRCC3-211ENST00000555055 PPRC1Q5VV67 1664 aaKnown RBP20.02■□□□□ 0.8
XRCC3-211ENST00000555055 FRMPD1Q5SYB0 1578 aa20.01■□□□□ 0.79
XRCC3-211ENST00000555055 KTN1Q86UP2 1357 aaKnown RBP20■□□□□ 0.79
XRCC3-211ENST00000555055 MSH5O43196 834 aa20■□□□□ 0.79
XRCC3-211ENST00000555055 RALBP1Q15311 655 aa19.99■□□□□ 0.79
XRCC3-211ENST00000555055 EFCAB6Q5THR3 1501 aa19.98■□□□□ 0.79
XRCC3-211ENST00000555055 RNF17Q9BXT8 1623 aaKnown RBP19.98■□□□□ 0.79
XRCC3-211ENST00000555055 NPATQ14207 1427 aa19.98■□□□□ 0.79
XRCC3-211ENST00000555055 ABCA6Q8N139 1617 aa19.97■□□□□ 0.79
XRCC3-211ENST00000555055 TMEM132EQ6IEE7 984 aa19.96■□□□□ 0.79
XRCC3-211ENST00000555055 MROH2AA6NES4 1674 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms