RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 ARHGEF5Q12774 1597 aa24.08■■□□□ 1.45
XRCC3-210ENST00000554974 POLR1AO95602 1720 aaPredicted RBP24.08■■□□□ 1.45
XRCC3-210ENST00000554974 KIF3BO15066 747 aa24.08■■□□□ 1.45
XRCC3-210ENST00000554974 PZPP20742 1482 aa24.07■■□□□ 1.44
XRCC3-210ENST00000554974 FAM135AQ9P2D6 1515 aa24.05■■□□□ 1.44
XRCC3-210ENST00000554974 TNRQ92752 1358 aa24.04■■□□□ 1.44
XRCC3-210ENST00000554974 FBXO31Q5XUX0 539 aaPredicted RBP24.04■■□□□ 1.44
XRCC3-210ENST00000554974 ILDR2Q71H61 639 aa24.04■■□□□ 1.44
XRCC3-210ENST00000554974 NEURL4Q96JN8 1562 aa24.03■■□□□ 1.44
XRCC3-210ENST00000554974 VPS8Q8N3P4 1428 aa24.02■■□□□ 1.44
XRCC3-210ENST00000554974 LRRC9Q6ZRR7 1453 aa24.02■■□□□ 1.44
XRCC3-210ENST00000554974 WASHC2CQ9Y4E1 1318 aa24■■□□□ 1.43
XRCC3-210ENST00000554974 UBAP1LF5GYI3 381 aa23.99■■□□□ 1.43
XRCC3-210ENST00000554974 RSPH4AQ5TD94 716 aa23.99■■□□□ 1.43
XRCC3-210ENST00000554974 RNF17Q9BXT8 1623 aaKnown RBP23.99■■□□□ 1.43
XRCC3-210ENST00000554974 MAST1Q9Y2H9 1570 aa23.97■■□□□ 1.43
XRCC3-210ENST00000554974 LOC105371045A0A1W2PR82 267 aa23.94■■□□□ 1.42
XRCC3-210ENST00000554974 TSPY4P0CV99 314 aa23.94■■□□□ 1.42
XRCC3-210ENST00000554974 TSPY10P0CW01 314 aa23.94■■□□□ 1.42
XRCC3-210ENST00000554974 ZC3H13Q5T200 1668 aaKnown RBP23.94■■□□□ 1.42
XRCC3-210ENST00000554974 ABCC3O15438 1527 aa23.94■■□□□ 1.42
XRCC3-210ENST00000554974 NLRP1Q9C000 1473 aa23.94■■□□□ 1.42
XRCC3-210ENST00000554974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.93■■□□□ 1.423e-6■■■■□ 21.3
XRCC3-210ENST00000554974 UGGT1Q9NYU2 1555 aa23.93■■□□□ 1.42
XRCC3-210ENST00000554974 MIA2Q96PC5 1412 aa23.93■■□□□ 1.42
XRCC3-210ENST00000554974 EIF2AK4Q9P2K8 1649 aaKnown RBP23.92■■□□□ 1.42
XRCC3-210ENST00000554974 MROH1Q8NDA8 1641 aa23.92■■□□□ 1.42
XRCC3-210ENST00000554974 KANK4Q5T7N3 995 aaPredicted RBP23.91■■□□□ 1.42
XRCC3-210ENST00000554974 CEP152O94986 1710 aa23.9■■□□□ 1.42
XRCC3-210ENST00000554974 CPS1P31327 1500 aa23.89■■□□□ 1.42
XRCC3-210ENST00000554974 SHANK2Q9UPX8 1470 aa23.89■■□□□ 1.42
XRCC3-210ENST00000554974 MYOM3Q5VTT5 1437 aa23.89■■□□□ 1.41
XRCC3-210ENST00000554974 VWDEQ8N2E2 1590 aa23.89■■□□□ 1.41
XRCC3-210ENST00000554974 MAP3K1Q13233 1512 aa23.89■■□□□ 1.41
XRCC3-210ENST00000554974 DEPDC5O75140 1603 aa23.88■■□□□ 1.41
XRCC3-210ENST00000554974 IQGAP1P46940 1657 aa23.86■■□□□ 1.41
XRCC3-210ENST00000554974 SOCS7O14512 581 aa23.86■■□□□ 1.41
XRCC3-210ENST00000554974 ANKLE2Q86XL3 938 aa23.85■■□□□ 1.41
XRCC3-210ENST00000554974 ERVK-7P63135 1459 aa23.85■■□□□ 1.41
XRCC3-210ENST00000554974 CROCC2H7BZ55 1655 aa23.85■■□□□ 1.41
XRCC3-210ENST00000554974 NPHP4O75161 1426 aaPredicted RBP23.84■■□□□ 1.41
XRCC3-210ENST00000554974 THEMISQ8N1K5 641 aaPredicted RBP23.84■■□□□ 1.41
XRCC3-210ENST00000554974 MED14O60244 1454 aa23.83■■□□□ 1.41
XRCC3-210ENST00000554974 SCAF1Q9H7N4 1312 aaKnown RBP23.83■■□□□ 1.4
XRCC3-210ENST00000554974 DUOX2Q9NRD8 1548 aa23.82■■□□□ 1.4
XRCC3-210ENST00000554974 CFAP65Q6ZU64 1925 aaKnown RBP23.81■■□□□ 1.4
XRCC3-210ENST00000554974 PIP4K2BP78356 416 aa23.8■■□□□ 1.4
XRCC3-210ENST00000554974 UBR1Q8IWV7 1749 aa23.8■■□□□ 1.4
XRCC3-210ENST00000554974 STRCP1A6NGW2 1772 aa23.79■■□□□ 1.4
XRCC3-210ENST00000554974 PRDM15P57071 1507 aaPredicted RBP23.79■■□□□ 1.4
XRCC3-210ENST00000554974 PTPN23Q9H3S7 1636 aa23.77■■□□□ 1.4
XRCC3-210ENST00000554974 ALKQ9UM73 1620 aa23.77■■□□□ 1.4
XRCC3-210ENST00000554974 HSPA1LP34931 641 aa23.76■■□□□ 1.39
XRCC3-210ENST00000554974 KIF15Q9NS87 1388 aa23.76■■□□□ 1.39
XRCC3-210ENST00000554974 ABCC5O15440 1437 aa23.74■■□□□ 1.39
XRCC3-210ENST00000554974 MED1Q15648 1581 aaPredicted RBP23.74■■□□□ 1.39
XRCC3-210ENST00000554974 TOM1O60784 492 aa23.73■■□□□ 1.39
XRCC3-210ENST00000554974 ERBINQ96RT1 1412 aa23.72■■□□□ 1.39
XRCC3-210ENST00000554974 SYNMO15061 1565 aa23.72■■□□□ 1.39
XRCC3-210ENST00000554974 LRRC7Q96NW7 1537 aa23.69■■□□□ 1.38
XRCC3-210ENST00000554974 SCAF11Q99590 1463 aaKnown RBP23.69■■□□□ 1.38
XRCC3-210ENST00000554974 DAPK1P53355 1430 aa23.69■■□□□ 1.38
XRCC3-210ENST00000554974 RRP7BPQ9NSQ0 103 aa23.69■■□□□ 1.38
XRCC3-210ENST00000554974 PIK3C2BO00750 1634 aa23.68■■□□□ 1.38
XRCC3-210ENST00000554974 ARHGAP31Q2M1Z3 1444 aa23.67■■□□□ 1.38
XRCC3-210ENST00000554974 FGD6Q6ZV73 1430 aa23.67■■□□□ 1.38
XRCC3-210ENST00000554974 SLIT1O75093 1534 aa23.66■■□□□ 1.38
XRCC3-210ENST00000554974 ARHGAP23Q9P227 1491 aa23.66■■□□□ 1.38
XRCC3-210ENST00000554974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.65■■□□□ 1.38
XRCC3-210ENST00000554974 LTKP29376 864 aa23.62■■□□□ 1.37
XRCC3-210ENST00000554974 APLP2Q06481 763 aa23.62■■□□□ 1.37
XRCC3-210ENST00000554974 SENP3Q9H4L4 574 aaPredicted RBP23.61■■□□□ 1.37
XRCC3-210ENST00000554974 XIRP1Q702N8 1843 aaKnown RBP23.6■■□□□ 1.37
XRCC3-210ENST00000554974 TXNDC2Q86VQ3 553 aa23.59■■□□□ 1.37
XRCC3-210ENST00000554974 KANK1Q14678 1352 aa23.58■■□□□ 1.37
XRCC3-210ENST00000554974 CHIC2Q9UKJ5 165 aa23.58■■□□□ 1.37
XRCC3-210ENST00000554974 LMTK2Q8IWU2 1503 aa23.58■■□□□ 1.36
XRCC3-210ENST00000554974 ANKRD30AQ9BXX3 1397 aa23.56■■□□□ 1.36
XRCC3-210ENST00000554974 EFCAB6Q5THR3 1501 aa23.56■■□□□ 1.36
XRCC3-210ENST00000554974 KDM5AP29375 1690 aaKnown RBP23.56■■□□□ 1.36
XRCC3-210ENST00000554974 TMEM2Q9UHN6 1383 aa23.55■■□□□ 1.36
XRCC3-210ENST00000554974 EID1Q9Y6B2 187 aa23.53■■□□□ 1.36
XRCC3-210ENST00000554974 ADGRB3O60242 1522 aa23.51■■□□□ 1.35
XRCC3-210ENST00000554974 STAG3Q9UJ98 1225 aa23.51■■□□□ 1.35
XRCC3-210ENST00000554974 ADGRL2O95490 1459 aa23.5■■□□□ 1.35
XRCC3-210ENST00000554974 IDI1Q13907 227 aa23.48■■□□□ 1.35
XRCC3-210ENST00000554974 PHF23Q9BUL5 403 aaPredicted RBP23.48■■□□□ 1.35
XRCC3-210ENST00000554974 NOS1P29475 1434 aa23.48■■□□□ 1.35
XRCC3-210ENST00000554974 TET3O43151 1660 aa23.45■■□□□ 1.34
XRCC3-210ENST00000554974 FAM50AQ14320 339 aaKnown RBP23.44■■□□□ 1.34
XRCC3-210ENST00000554974 MYO5BQ9ULV0 1848 aa23.43■■□□□ 1.34
XRCC3-210ENST00000554974 TMEM94Q12767 1356 aa23.42■■□□□ 1.34
XRCC3-210ENST00000554974 SLC26A8Q96RN1 970 aa23.42■■□□□ 1.34
XRCC3-210ENST00000554974 ANKRD50Q9ULJ7 1429 aa23.42■■□□□ 1.34
XRCC3-210ENST00000554974 GCC2Q8IWJ2 1684 aa23.41■■□□□ 1.34
XRCC3-210ENST00000554974 NWD1Q149M9 1564 aa23.41■■□□□ 1.34
XRCC3-210ENST00000554974 RPRD2Q5VT52 1461 aaKnown RBP23.39■■□□□ 1.34
XRCC3-210ENST00000554974 RBM33Q96EV2 1170 aaKnown RBP23.39■■□□□ 1.33
XRCC3-210ENST00000554974 ROBO1Q9Y6N7 1651 aa23.38■■□□□ 1.33
XRCC3-210ENST00000554974 UNC13BO14795 1591 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms