RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 CENPJQ9HC77 1338 aaPredicted RBP7.96□□□□□ -1.14
PCNX1-207ENST00000554691 CCDC18Q5T9S5 1454 aa7.96□□□□□ -1.14
PCNX1-207ENST00000554691 CECR2Q9BXF3 1484 aa7.96□□□□□ -1.14
PCNX1-207ENST00000554691 PDE4CQ08493 712 aa7.96□□□□□ -1.14
PCNX1-207ENST00000554691 MFAP1P55081 439 aaKnown RBP7.95□□□□□ -1.14
PCNX1-207ENST00000554691 SETQ01105 290 aaPredicted RBP7.95□□□□□ -1.14
PCNX1-207ENST00000554691 SPRYD3Q8NCJ5 442 aa7.95□□□□□ -1.14
PCNX1-207ENST00000554691 L3MBTL2Q969R5 705 aa7.95□□□□□ -1.14
PCNX1-207ENST00000554691 CWC15Q9P013 229 aaKnown RBP7.95□□□□□ -1.14
PCNX1-207ENST00000554691 E9PSI1 815 aa7.95□□□□□ -1.14
PCNX1-207ENST00000554691 ATP6V1DQ9Y5K8 247 aa7.95□□□□□ -1.14
PCNX1-207ENST00000554691 MBD3O95983 291 aa7.95□□□□□ -1.14
PCNX1-207ENST00000554691 KIF3AQ9Y496 699 aa7.95□□□□□ -1.14
PCNX1-207ENST00000554691 MCM4P33991 863 aa7.94□□□□□ -1.14
PCNX1-207ENST00000554691 TERF1P54274 439 aa7.94□□□□□ -1.14
PCNX1-207ENST00000554691 DYNC1I1O14576 645 aa7.94□□□□□ -1.14
PCNX1-207ENST00000554691 CAVIN1Q6NZI2 390 aaKnown RBP7.93□□□□□ -1.14
PCNX1-207ENST00000554691 RAPGEF2Q9Y4G8 1499 aa7.93□□□□□ -1.14
PCNX1-207ENST00000554691 ARID3AQ99856 593 aa7.93□□□□□ -1.14
PCNX1-207ENST00000554691 CARMIL1Q5VZK9 1371 aa7.92□□□□□ -1.14
PCNX1-207ENST00000554691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.92□□□□□ -1.14
PCNX1-207ENST00000554691 MIA2Q96PC5 1412 aa7.92□□□□□ -1.14
PCNX1-207ENST00000554691 LETM1O95202 739 aaPredicted RBP7.92□□□□□ -1.14
PCNX1-207ENST00000554691 TPM4P67936 248 aa7.92□□□□□ -1.14
PCNX1-207ENST00000554691 CC2D1BQ5T0F9 858 aaKnown RBP7.92□□□□□ -1.14
PCNX1-207ENST00000554691 ARGLU1Q9NWB6 273 aaPredicted RBP7.92□□□□□ -1.14
PCNX1-207ENST00000554691 ERICH3Q5RHP9 1530 aa7.92□□□□□ -1.14
PCNX1-207ENST00000554691 SMAP1Q8IYB5 467 aaPredicted RBP7.92□□□□□ -1.14
PCNX1-207ENST00000554691 SASS6Q6UVJ0 657 aa7.91□□□□□ -1.14
PCNX1-207ENST00000554691 C22orf23Q9BZE7 217 aa7.91□□□□□ -1.14
PCNX1-207ENST00000554691 UQCRHLA0A096LP55 91 aa7.91□□□□□ -1.14
PCNX1-207ENST00000554691 UQCRHP07919 91 aa7.91□□□□□ -1.14
PCNX1-207ENST00000554691 DHX8Q14562 1220 aaKnown RBP7.91□□□□□ -1.14
PCNX1-207ENST00000554691 GTPBP4Q9BZE4 634 aaKnown RBP7.91□□□□□ -1.14
PCNX1-207ENST00000554691 PLEKHH2Q8IVE3 1493 aa7.91□□□□□ -1.14
PCNX1-207ENST00000554691 HS1BP3Q53T59 392 aa7.9□□□□□ -1.14
PCNX1-207ENST00000554691 AMER1Q5JTC6 1135 aaPredicted RBP7.9□□□□□ -1.14
PCNX1-207ENST00000554691 APPP05067 770 aa7.9□□□□□ -1.14
PCNX1-207ENST00000554691 PDE3AQ14432 1141 aa7.9□□□□□ -1.14
PCNX1-207ENST00000554691 USP47Q96K76 1375 aa7.89□□□□□ -1.15
PCNX1-207ENST00000554691 AKNAQ7Z591 1439 aa7.89□□□□□ -1.15
PCNX1-207ENST00000554691 CALCOCO1Q9P1Z2 691 aa7.89□□□□□ -1.15
PCNX1-207ENST00000554691 KIF7Q2M1P5 1343 aa7.89□□□□□ -1.15
PCNX1-207ENST00000554691 FAM184AQ8NB25 1140 aa7.89□□□□□ -1.15
PCNX1-207ENST00000554691 CLUAP1Q96AJ1 413 aa7.89□□□□□ -1.15
PCNX1-207ENST00000554691 CFDP1Q9UEE9 299 aaPredicted RBP7.89□□□□□ -1.15
PCNX1-207ENST00000554691 CUX2O14529 1486 aa7.88□□□□□ -1.15
PCNX1-207ENST00000554691 CUX1P39880 1505 aa7.88□□□□□ -1.15
PCNX1-207ENST00000554691 KIF20AO95235 890 aa7.88□□□□□ -1.15
PCNX1-207ENST00000554691 RNF20Q5VTR2 975 aa7.88□□□□□ -1.15
PCNX1-207ENST00000554691 PRIMPOLQ96LW4 560 aa7.88□□□□□ -1.15
PCNX1-207ENST00000554691 STAG3Q9UJ98 1225 aa7.88□□□□□ -1.15
PCNX1-207ENST00000554691 WDR97A6NE52 1622 aa7.88□□□□□ -1.15
PCNX1-207ENST00000554691 CWC22Q9HCG8 908 aaKnown RBP7.87□□□□□ -1.15
PCNX1-207ENST00000554691 SMARCA2P51531 1590 aa7.87□□□□□ -1.15
PCNX1-207ENST00000554691 DDX19BQ9UMR2 479 aa7.87□□□□□ -1.15
PCNX1-207ENST00000554691 WIZO95785 1651 aa7.87□□□□□ -1.15
PCNX1-207ENST00000554691 REC8O95072 547 aa7.87□□□□□ -1.15
PCNX1-207ENST00000554691 ACBD3Q9H3P7 528 aa7.87□□□□□ -1.15
PCNX1-207ENST00000554691 RBM10P98175 930 aaKnown RBP7.86□□□□□ -1.15
PCNX1-207ENST00000554691 ZKSCAN2Q63HK3 967 aa7.86□□□□□ -1.15
PCNX1-207ENST00000554691 DCAF11Q8TEB1 546 aa7.86□□□□□ -1.15
PCNX1-207ENST00000554691 PNISRQ8TF01 805 aaKnown RBP7.86□□□□□ -1.15
PCNX1-207ENST00000554691 CHMP4CQ96CF2 233 aa7.86□□□□□ -1.15
PCNX1-207ENST00000554691 POGKQ9P215 609 aa7.86□□□□□ -1.15
PCNX1-207ENST00000554691 MCM2P49736 904 aa7.86□□□□□ -1.15
PCNX1-207ENST00000554691 SENP3-EIF4A1A0A087X0R7 540 aa7.86□□□□□ -1.15
PCNX1-207ENST00000554691 PLPPR3Q6T4P5 718 aa7.86□□□□□ -1.15
PCNX1-207ENST00000554691 LRRC9Q6ZRR7 1453 aa7.85□□□□□ -1.15
PCNX1-207ENST00000554691 HMMRO75330 724 aa7.85□□□□□ -1.15
PCNX1-207ENST00000554691 ITPRIPQ8IWB1 547 aa7.85□□□□□ -1.15
PCNX1-207ENST00000554691 PLIN1O60240 522 aa7.85□□□□□ -1.15
PCNX1-207ENST00000554691 USP8P40818 1118 aa7.85□□□□□ -1.15
PCNX1-207ENST00000554691 MAP3K1Q13233 1512 aa7.85□□□□□ -1.15
PCNX1-207ENST00000554691 FGD6Q6ZV73 1430 aa7.84□□□□□ -1.15
PCNX1-207ENST00000554691 NEUROD2Q15784 382 aa7.84□□□□□ -1.15
PCNX1-207ENST00000554691 DNAJC2Q99543 621 aaKnown RBP7.84□□□□□ -1.15
PCNX1-207ENST00000554691 OFD1O75665 1012 aa7.84□□□□□ -1.15
PCNX1-207ENST00000554691 PKD2Q13563 968 aa7.84□□□□□ -1.15
PCNX1-207ENST00000554691 TSPY26PQ9H489 355 aa7.84□□□□□ -1.15
PCNX1-207ENST00000554691 GOLGA6L19H0YKK7 550 aa7.83□□□□□ -1.16
PCNX1-207ENST00000554691 CCP110O43303 1012 aa7.83□□□□□ -1.16
PCNX1-207ENST00000554691 RABEP1Q15276 862 aa7.83□□□□□ -1.16
PCNX1-207ENST00000554691 CREBRFQ8IUR6 639 aa7.83□□□□□ -1.16
PCNX1-207ENST00000554691 AK7Q96M32 723 aa7.83□□□□□ -1.16
PCNX1-207ENST00000554691 RUSC2Q8N2Y8 1516 aa7.83□□□□□ -1.16
PCNX1-207ENST00000554691 NBPF1Q3BBV0 1214 aa7.83□□□□□ -1.16
PCNX1-207ENST00000554691 MORC1Q86VD1 984 aa7.83□□□□□ -1.16
PCNX1-207ENST00000554691 SMC4Q9NTJ3 1288 aa7.83□□□□□ -1.16
PCNX1-207ENST00000554691 DHX29Q7Z478 1369 aaKnown RBP7.83□□□□□ -1.16
PCNX1-207ENST00000554691 KIF2AO00139 706 aaPredicted RBP7.83□□□□□ -1.16
PCNX1-207ENST00000554691 PLEKHG5O94827 1062 aa7.83□□□□□ -1.16
PCNX1-207ENST00000554691 BBXQ8WY36 941 aaPredicted RBP7.83□□□□□ -1.16
PCNX1-207ENST00000554691 CHMP4AQ9BY43 222 aa7.83□□□□□ -1.16
PCNX1-207ENST00000554691 PLEKHD1A6NEE1 506 aa7.82□□□□□ -1.16
PCNX1-207ENST00000554691 CCDC34Q96HJ3 373 aa7.82□□□□□ -1.16
PCNX1-207ENST00000554691 STAC3Q96MF2 364 aa7.82□□□□□ -1.16
PCNX1-207ENST00000554691 HFM1A2PYH4 1435 aa7.82□□□□□ -1.16
PCNX1-207ENST00000554691 PDIA4P13667 645 aaKnown RBP7.82□□□□□ -1.16
PCNX1-207ENST00000554691 TAF7LQ5H9L4 462 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms