RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 SMARCA4P51532 1647 aa11.97□□□□□ -0.49
KTN1-213ENST00000554306 PHF14O94880 888 aa11.95□□□□□ -0.5
KTN1-213ENST00000554306 E2F4Q16254 413 aa11.95□□□□□ -0.5
KTN1-213ENST00000554306 FBXW7Q969H0 707 aa11.94□□□□□ -0.5
KTN1-213ENST00000554306 SLC4A5Q9BY07 1137 aa11.94□□□□□ -0.5
KTN1-213ENST00000554306 PCDHGA10Q9Y5H3 936 aa11.94□□□□□ -0.5
KTN1-213ENST00000554306 HRO43593 1189 aa11.93□□□□□ -0.5
KTN1-213ENST00000554306 TYW1BQ6NUM6 668 aa11.93□□□□□ -0.5
KTN1-213ENST00000554306 ADAM33Q9BZ11 813 aa11.93□□□□□ -0.5
KTN1-213ENST00000554306 MROH2BQ7Z745 1585 aa11.92□□□□□ -0.5
KTN1-213ENST00000554306 STAC3Q96MF2 364 aa11.92□□□□□ -0.5
KTN1-213ENST00000554306 EPAS1Q99814 870 aa11.91□□□□□ -0.5
KTN1-213ENST00000554306 VPS9D1Q9Y2B5 631 aa11.91□□□□□ -0.5
KTN1-213ENST00000554306 SPDYE16A6NNV3 312 aaPredicted RBP11.9□□□□□ -0.5
KTN1-213ENST00000554306 PDIA6Q15084 440 aa11.9□□□□□ -0.5
KTN1-213ENST00000554306 ARIH1Q9Y4X5 557 aaPredicted RBP11.89□□□□□ -0.51
KTN1-213ENST00000554306 RSF1Q96T23 1441 aaPredicted RBP11.88□□□□□ -0.51
KTN1-213ENST00000554306 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
KTN1-213ENST00000554306 CC2D2AQ9P2K1 1620 aa11.87□□□□□ -0.51
KTN1-213ENST00000554306 PPP1R3GB7ZBB8 358 aa11.86□□□□□ -0.51
KTN1-213ENST00000554306 SMARCA2P51531 1590 aa11.85□□□□□ -0.51
KTN1-213ENST00000554306 SUPT5HO00267 1087 aaKnown RBP11.85□□□□□ -0.51
KTN1-213ENST00000554306 TSHZ2Q9NRE2 1034 aa11.85□□□□□ -0.51
KTN1-213ENST00000554306 WIZO95785 1651 aa11.84□□□□□ -0.51
KTN1-213ENST00000554306 DDX12PQ92771 950 aa11.84□□□□□ -0.51
KTN1-213ENST00000554306 PEG3Q9GZU2 1588 aa11.82□□□□□ -0.52
KTN1-213ENST00000554306 ATAD2BQ9ULI0 1458 aa11.82□□□□□ -0.52
KTN1-213ENST00000554306 BHMG1C9JSJ3 638 aaPredicted RBP11.81□□□□□ -0.52
KTN1-213ENST00000554306 C6orf132Q5T0Z8 1188 aa11.81□□□□□ -0.52
KTN1-213ENST00000554306 HCSTQ9UBK5 93 aa11.81□□□□□ -0.52
KTN1-213ENST00000554306 NBR1Q14596 966 aa11.79□□□□□ -0.52
KTN1-213ENST00000554306 NBPF3Q9H094 633 aa11.79□□□□□ -0.52
KTN1-213ENST00000554306 COL9A1P20849 921 aa11.78□□□□□ -0.52
KTN1-213ENST00000554306 MRPL50Q8N5N7 158 aaKnown RBP11.78□□□□□ -0.52
KTN1-213ENST00000554306 KCTD12Q96CX2 325 aaKnown RBP11.78□□□□□ -0.52
KTN1-213ENST00000554306 EN1Q05925 392 aaPredicted RBP11.77□□□□□ -0.53
KTN1-213ENST00000554306 RBM33Q96EV2 1170 aaKnown RBP11.77□□□□□ -0.53
KTN1-213ENST00000554306 RABGEF1Q9UJ41 708 aa11.77□□□□□ -0.53
KTN1-213ENST00000554306 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
KTN1-213ENST00000554306 BAZ1BQ9UIG0 1483 aaKnown RBP11.76□□□□□ -0.53
KTN1-213ENST00000554306 GOLGA8CPA6NN73 597 aa11.76□□□□□ -0.53
KTN1-213ENST00000554306 MAP3K7O43318 606 aa11.75□□□□□ -0.53
KTN1-213ENST00000554306 ONECUT3O60422 494 aaPredicted RBP11.75□□□□□ -0.53
KTN1-213ENST00000554306 PLCB2Q00722 1185 aa11.75□□□□□ -0.53
KTN1-213ENST00000554306 PROX2Q3B8N5 592 aa11.74□□□□□ -0.53
KTN1-213ENST00000554306 HMGXB3Q12766 1538 aa11.74□□□□□ -0.53
KTN1-213ENST00000554306 GRXCR2A6NFK2 248 aa11.73□□□□□ -0.53
KTN1-213ENST00000554306 ARHGEF1Q92888 912 aaKnown RBP11.73□□□□□ -0.53
KTN1-213ENST00000554306 TOP2AP11388 1531 aaKnown RBP11.72□□□□□ -0.53
KTN1-213ENST00000554306 WNT2BQ93097 391 aa11.7□□□□□ -0.54
KTN1-213ENST00000554306 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
KTN1-213ENST00000554306 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
KTN1-213ENST00000554306 LAPTM4BQ86VI4 370 aa11.69□□□□□ -0.54
KTN1-213ENST00000554306 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
KTN1-213ENST00000554306 CERKQ8TCT0 537 aa11.68□□□□□ -0.54
KTN1-213ENST00000554306 KCNV2Q8TDN2 545 aa11.68□□□□□ -0.54
KTN1-213ENST00000554306 KIAA1468Q9P260 1216 aa11.68□□□□□ -0.54
KTN1-213ENST00000554306 THSD4Q6ZMP0 1018 aa11.67□□□□□ -0.54
KTN1-213ENST00000554306 OSBPP22059 807 aa11.65□□□□□ -0.54
KTN1-213ENST00000554306 PTPN5P54829 565 aa11.65□□□□□ -0.54
KTN1-213ENST00000554306 ANKK1Q8NFD2 765 aa11.64□□□□□ -0.55
KTN1-213ENST00000554306 PRIM1P49642 420 aaKnown RBP11.63□□□□□ -0.55
KTN1-213ENST00000554306 PACS2Q86VP3 889 aa11.63□□□□□ -0.55
KTN1-213ENST00000554306 PLA2G2EQ9NZK7 142 aa11.62□□□□□ -0.55
KTN1-213ENST00000554306 CDCA7LQ96GN5 454 aa11.61□□□□□ -0.55
KTN1-213ENST00000554306 PRSS12P56730 875 aa11.6□□□□□ -0.55
KTN1-213ENST00000554306 FAM98CQ17RN3 349 aaKnown RBP11.59□□□□□ -0.55
KTN1-213ENST00000554306 ZFRQ96KR1 1074 aaKnown RBP11.59□□□□□ -0.55
KTN1-213ENST00000554306 SEPT9Q9UHD8 586 aaPredicted RBP11.59□□□□□ -0.55
KTN1-213ENST00000554306 TSKSQ9UJT2 592 aa11.59□□□□□ -0.55
KTN1-213ENST00000554306 RBM27Q9P2N5 1060 aaKnown RBP11.58□□□□□ -0.56
KTN1-213ENST00000554306 CCDC88BA6NC98 1476 aa11.57□□□□□ -0.56
KTN1-213ENST00000554306 SOWAHBA6NEL2 793 aa11.57□□□□□ -0.56
KTN1-213ENST00000554306 CDHR5Q9HBB8 845 aa11.57□□□□□ -0.56
KTN1-213ENST00000554306 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
KTN1-213ENST00000554306 MLLT3P42568 568 aaPredicted RBP11.55□□□□□ -0.56
KTN1-213ENST00000554306 NBPF26B4DH59 902 aa11.54□□□□□ -0.56
KTN1-213ENST00000554306 BCAMP50895 628 aa11.53□□□□□ -0.56
KTN1-213ENST00000554306 NYAP1Q6ZVC0 841 aa11.52□□□□□ -0.57
KTN1-213ENST00000554306 LRCH3Q96II8 777 aa11.52□□□□□ -0.57
KTN1-213ENST00000554306 TATDN2Q93075 761 aa11.51□□□□□ -0.57
KTN1-213ENST00000554306 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.51□□□□□ -0.57
KTN1-213ENST00000554306 NPDC1Q9NQX5 325 aaPredicted RBP11.5□□□□□ -0.57
KTN1-213ENST00000554306 FAM198AQ9UFP1 575 aa11.5□□□□□ -0.57
KTN1-213ENST00000554306 PNMA3Q9UL41 463 aa11.5□□□□□ -0.57
KTN1-213ENST00000554306 IFFO2Q5TF58 517 aa11.48□□□□□ -0.57
KTN1-213ENST00000554306 TSR3Q9UJK0 312 aaKnown RBP11.48□□□□□ -0.57
KTN1-213ENST00000554306 SMAPO00193 183 aa11.47□□□□□ -0.57
KTN1-213ENST00000554306 SEMA3EO15041 775 aa11.47□□□□□ -0.57
KTN1-213ENST00000554306 PADI6Q6TGC4 694 aa11.47□□□□□ -0.57
KTN1-213ENST00000554306 TTC13Q8NBP0 860 aa11.47□□□□□ -0.57
KTN1-213ENST00000554306 NUDT18Q6ZVK8 323 aa11.46□□□□□ -0.57
KTN1-213ENST00000554306 PRDM2Q13029 1718 aa11.46□□□□□ -0.58
KTN1-213ENST00000554306 WBP1LQ9NX94 342 aa11.45□□□□□ -0.58
KTN1-213ENST00000554306 HPS5Q9UPZ3 1129 aa11.45□□□□□ -0.58
KTN1-213ENST00000554306 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
KTN1-213ENST00000554306 CADPSQ9ULU8 1353 aa11.44□□□□□ -0.58
KTN1-213ENST00000554306 HDGFP51858 240 aaKnown RBP11.44□□□□□ -0.58
KTN1-213ENST00000554306 C3orf80F5H4A9 247 aa11.43□□□□□ -0.58
KTN1-213ENST00000554306 PTGDRQ13258 359 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms