RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 DHX29Q7Z478 1369 aaKnown RBP16.86■□□□□ 0.29
PNN-203ENST00000554117 CEP152O94986 1710 aa16.84■□□□□ 0.29
PNN-203ENST00000554117 PTPRTO14522 1441 aa16.83■□□□□ 0.28
PNN-203ENST00000554117 MYOM3Q5VTT5 1437 aa16.83■□□□□ 0.28
PNN-203ENST00000554117 CERKQ8TCT0 537 aa16.83■□□□□ 0.28
PNN-203ENST00000554117 MIA2Q96PC5 1412 aa16.83■□□□□ 0.28
PNN-203ENST00000554117 PTPN23Q9H3S7 1636 aa16.83■□□□□ 0.28
PNN-203ENST00000554117 RNF17Q9BXT8 1623 aaKnown RBP16.82■□□□□ 0.28
PNN-203ENST00000554117 KIF3BO15066 747 aa16.82■□□□□ 0.28
PNN-203ENST00000554117 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
PNN-203ENST00000554117 WASHC2CQ9Y4E1 1318 aa16.79■□□□□ 0.28
PNN-203ENST00000554117 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
PNN-203ENST00000554117 DNMT1P26358 1616 aaKnown RBP16.78■□□□□ 0.28
PNN-203ENST00000554117 PLA2R1Q13018 1463 aa16.78■□□□□ 0.28
PNN-203ENST00000554117 DUOX2Q9NRD8 1548 aa16.77■□□□□ 0.28
PNN-203ENST00000554117 A2ML1A8K2U0 1454 aa16.76■□□□□ 0.27
PNN-203ENST00000554117 PZPP20742 1482 aa16.76■□□□□ 0.27
PNN-203ENST00000554117 PKD2Q13563 968 aa16.75■□□□□ 0.27
PNN-203ENST00000554117 IQSEC2Q5JU85 1478 aa16.73■□□□□ 0.27
PNN-203ENST00000554117 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
PNN-203ENST00000554117 TNRQ92752 1358 aa16.73■□□□□ 0.27
PNN-203ENST00000554117 SHANK2Q9UPX8 1470 aa16.73■□□□□ 0.27
PNN-203ENST00000554117 NLRP1Q9C000 1473 aa16.71■□□□□ 0.27
PNN-203ENST00000554117 UGGT1Q9NYU2 1555 aa16.7■□□□□ 0.26
PNN-203ENST00000554117 ABCC3O15438 1527 aa16.69■□□□□ 0.26
PNN-203ENST00000554117 DEPDC5O75140 1603 aa16.68■□□□□ 0.26
PNN-203ENST00000554117 IQGAP1P46940 1657 aa16.68■□□□□ 0.26
PNN-203ENST00000554117 NCKAP5LQ9HCH0 1330 aa16.68■□□□□ 0.26
PNN-203ENST00000554117 TCOF1Q13428 1488 aaKnown RBP16.67■□□□□ 0.26
PNN-203ENST00000554117 LTBP4Q8N2S1 1624 aa16.67■□□□□ 0.26
PNN-203ENST00000554117 KANK1Q14678 1352 aa16.67■□□□□ 0.26
PNN-203ENST00000554117 FGD6Q6ZV73 1430 aa16.67■□□□□ 0.26
PNN-203ENST00000554117 ERBINQ96RT1 1412 aa16.67■□□□□ 0.26
PNN-203ENST00000554117 UBR1Q8IWV7 1749 aa16.67■□□□□ 0.26
PNN-203ENST00000554117 THEMISQ8N1K5 641 aaPredicted RBP16.66■□□□□ 0.26
PNN-203ENST00000554117 PRDM15P57071 1507 aaPredicted RBP16.65■□□□□ 0.26
PNN-203ENST00000554117 KIF15Q9NS87 1388 aa16.65■□□□□ 0.26
PNN-203ENST00000554117 SPATA31D1Q6ZQQ2 1576 aa16.65■□□□□ 0.26
PNN-203ENST00000554117 DAPK1P53355 1430 aa16.65■□□□□ 0.26
PNN-203ENST00000554117 MROH1Q8NDA8 1641 aa16.65■□□□□ 0.26
PNN-203ENST00000554117 ANKRD30AQ9BXX3 1397 aa16.64■□□□□ 0.25
PNN-203ENST00000554117 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
PNN-203ENST00000554117 FBXO31Q5XUX0 539 aaPredicted RBP16.62■□□□□ 0.25
PNN-203ENST00000554117 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
PNN-203ENST00000554117 NEURL4Q96JN8 1562 aa16.61■□□□□ 0.25
PNN-203ENST00000554117 ABCC5O15440 1437 aa16.61■□□□□ 0.25
PNN-203ENST00000554117 ERVK-7P63135 1459 aa16.61■□□□□ 0.25
PNN-203ENST00000554117 CPS1P31327 1500 aa16.6■□□□□ 0.25
PNN-203ENST00000554117 GCC2Q8IWJ2 1684 aa16.6■□□□□ 0.25
PNN-203ENST00000554117 RRP7BPQ9NSQ0 103 aa16.6■□□□□ 0.25
PNN-203ENST00000554117 FAM50AQ14320 339 aaKnown RBP16.58■□□□□ 0.24
PNN-203ENST00000554117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.242e-15■■□□□ 12.9
PNN-203ENST00000554117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.58■□□□□ 0.24
PNN-203ENST00000554117 PIK3C2BO00750 1634 aa16.57■□□□□ 0.24
PNN-203ENST00000554117 ZNF335Q9H4Z2 1342 aaPredicted RBP16.57■□□□□ 0.24
PNN-203ENST00000554117 MYO5BQ9ULV0 1848 aa16.56■□□□□ 0.24
PNN-203ENST00000554117 SYNMO15061 1565 aa16.56■□□□□ 0.24
PNN-203ENST00000554117 STAG3Q9UJ98 1225 aa16.55■□□□□ 0.24
PNN-203ENST00000554117 CHIC2Q9UKJ5 165 aa16.55■□□□□ 0.24
PNN-203ENST00000554117 NPHP4O75161 1426 aaPredicted RBP16.54■□□□□ 0.24
PNN-203ENST00000554117 ARHGAP31Q2M1Z3 1444 aa16.54■□□□□ 0.24
PNN-203ENST00000554117 TET3O43151 1660 aa16.54■□□□□ 0.24
PNN-203ENST00000554117 UBAP1LF5GYI3 381 aa16.54■□□□□ 0.24
PNN-203ENST00000554117 MED14O60244 1454 aa16.54■□□□□ 0.24
PNN-203ENST00000554117 ADGRL2O95490 1459 aa16.54■□□□□ 0.24
PNN-203ENST00000554117 EFCAB6Q5THR3 1501 aa16.51■□□□□ 0.23
PNN-203ENST00000554117 EID1Q9Y6B2 187 aa16.51■□□□□ 0.23
PNN-203ENST00000554117 LMTK2Q8IWU2 1503 aa16.5■□□□□ 0.23
PNN-203ENST00000554117 SCAF1Q9H7N4 1312 aaKnown RBP16.5■□□□□ 0.23
PNN-203ENST00000554117 STRCP1A6NGW2 1772 aa16.5■□□□□ 0.23
PNN-203ENST00000554117 SCAF11Q99590 1463 aaKnown RBP16.49■□□□□ 0.23
PNN-203ENST00000554117 TOM1O60784 492 aa16.49■□□□□ 0.23
PNN-203ENST00000554117 VWDEQ8N2E2 1590 aa16.49■□□□□ 0.23
PNN-203ENST00000554117 UNC13BO14795 1591 aa16.48■□□□□ 0.23
PNN-203ENST00000554117 SLIT1O75093 1534 aa16.48■□□□□ 0.23
PNN-203ENST00000554117 ANKRD50Q9ULJ7 1429 aa16.47■□□□□ 0.23
PNN-203ENST00000554117 DISP3Q9P2K9 1392 aa16.47■□□□□ 0.23
PNN-203ENST00000554117 RPRD2Q5VT52 1461 aaKnown RBP16.46■□□□□ 0.23
PNN-203ENST00000554117 XIRP1Q702N8 1843 aaKnown RBP16.45■□□□□ 0.22
PNN-203ENST00000554117 ADGRB3O60242 1522 aa16.45■□□□□ 0.22
PNN-203ENST00000554117 IQGAP3Q86VI3 1631 aa16.44■□□□□ 0.22
PNN-203ENST00000554117 E9PCH4 1651 aa16.43■□□□□ 0.22
PNN-203ENST00000554117 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
PNN-203ENST00000554117 ARHGAP23Q9P227 1491 aa16.42■□□□□ 0.22
PNN-203ENST00000554117 SPHKAPQ2M3C7 1700 aa16.42■□□□□ 0.22
PNN-203ENST00000554117 PIP4K2BP78356 416 aa16.41■□□□□ 0.22
PNN-203ENST00000554117 KIF1BO60333 1816 aa16.4■□□□□ 0.22
PNN-203ENST00000554117 HDGFP51858 240 aaKnown RBP16.4■□□□□ 0.22
PNN-203ENST00000554117 SLC52A1Q9NWF4 448 aa16.4■□□□□ 0.22
PNN-203ENST00000554117 BCANQ96GW7 911 aa16.39■□□□□ 0.21
PNN-203ENST00000554117 CHD2O14647 1828 aaKnown RBP16.39■□□□□ 0.21
PNN-203ENST00000554117 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
PNN-203ENST00000554117 TMEM2Q9UHN6 1383 aa16.38■□□□□ 0.21
PNN-203ENST00000554117 ITGAEP38570 1179 aa16.37■□□□□ 0.21
PNN-203ENST00000554117 NOS1P29475 1434 aa16.36■□□□□ 0.21
PNN-203ENST00000554117 LRRC7Q96NW7 1537 aa16.36■□□□□ 0.21
PNN-203ENST00000554117 TMEM131LA2VDJ0 1609 aa16.36■□□□□ 0.21
PNN-203ENST00000554117 PPP1R15AO75807 674 aaPredicted RBP16.35■□□□□ 0.21
PNN-203ENST00000554117 IDI1Q13907 227 aa16.35■□□□□ 0.21
PNN-203ENST00000554117 LTKP29376 864 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms