RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 DHX29Q7Z478 1369 aaKnown RBP17.33■□□□□ 0.36
NEK9-202ENST00000553823 A2MP01023 1474 aa17.32■□□□□ 0.36
NEK9-202ENST00000553823 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
NEK9-202ENST00000553823 YEATS2Q9ULM3 1422 aa17.3■□□□□ 0.36
NEK9-202ENST00000553823 CLSPNQ9HAW4 1339 aa17.3■□□□□ 0.36
NEK9-202ENST00000553823 EIF2AK4Q9P2K8 1649 aaKnown RBP17.3■□□□□ 0.36
NEK9-202ENST00000553823 UNC13BO14795 1591 aa17.3■□□□□ 0.36
NEK9-202ENST00000553823 NUP155O75694 1391 aa17.28■□□□□ 0.36
NEK9-202ENST00000553823 KDM5DQ9BY66 1539 aa17.28■□□□□ 0.36
NEK9-202ENST00000553823 MPHOSPH9Q99550 1183 aa17.28■□□□□ 0.36
NEK9-202ENST00000553823 PZPP20742 1482 aa17.26■□□□□ 0.35
NEK9-202ENST00000553823 KIF3BO15066 747 aa17.26■□□□□ 0.35
NEK9-202ENST00000553823 DEPDC5O75140 1603 aa17.25■□□□□ 0.35
NEK9-202ENST00000553823 ATP10AO60312 1499 aa17.25■□□□□ 0.35
NEK9-202ENST00000553823 BCORL1Q5H9F3 1711 aa17.25■□□□□ 0.35
NEK9-202ENST00000553823 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
NEK9-202ENST00000553823 ZEB1P37275 1124 aaPredicted RBP17.24■□□□□ 0.35
NEK9-202ENST00000553823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.24■□□□□ 0.352e-9■■□□□ 11.8
NEK9-202ENST00000553823 ARHGEF40Q8TER5 1519 aa17.24■□□□□ 0.35
NEK9-202ENST00000553823 IQGAP3Q86VI3 1631 aa17.23■□□□□ 0.35
NEK9-202ENST00000553823 REREQ9P2R6 1566 aa17.23■□□□□ 0.35
NEK9-202ENST00000553823 RNF17Q9BXT8 1623 aaKnown RBP17.22■□□□□ 0.35
NEK9-202ENST00000553823 FAM135AQ9P2D6 1515 aa17.21■□□□□ 0.35
NEK9-202ENST00000553823 KANK1Q14678 1352 aa17.2■□□□□ 0.34
NEK9-202ENST00000553823 MROH1Q8NDA8 1641 aa17.2■□□□□ 0.34
NEK9-202ENST00000553823 PRDM15P57071 1507 aaPredicted RBP17.2■□□□□ 0.34
NEK9-202ENST00000553823 AGLP35573 1532 aa17.18■□□□□ 0.34
NEK9-202ENST00000553823 PKD2Q13563 968 aa17.18■□□□□ 0.34
NEK9-202ENST00000553823 VWDEQ8N2E2 1590 aa17.18■□□□□ 0.34
NEK9-202ENST00000553823 GGT6Q6P531 493 aa17.16■□□□□ 0.34
NEK9-202ENST00000553823 TET3O43151 1660 aa17.14■□□□□ 0.33
NEK9-202ENST00000553823 ANKRD30BQ9BXX2 1392 aa17.14■□□□□ 0.33
NEK9-202ENST00000553823 SIGLEC1Q9BZZ2 1709 aa17.13■□□□□ 0.33
NEK9-202ENST00000553823 CEP152O94986 1710 aa17.13■□□□□ 0.33
NEK9-202ENST00000553823 SIN3AQ96ST3 1273 aa17.12■□□□□ 0.33
NEK9-202ENST00000553823 LMTK2Q8IWU2 1503 aa17.11■□□□□ 0.33
NEK9-202ENST00000553823 E9PCH4 1651 aa17.1■□□□□ 0.33
NEK9-202ENST00000553823 NEUROD1Q13562 356 aa17.09■□□□□ 0.33
NEK9-202ENST00000553823 WASHC2CQ9Y4E1 1318 aa17.09■□□□□ 0.33
NEK9-202ENST00000553823 ABCC3O15438 1527 aa17.09■□□□□ 0.33
NEK9-202ENST00000553823 ZC3H13Q5T200 1668 aaKnown RBP17.09■□□□□ 0.33
NEK9-202ENST00000553823 EFCAB6Q5THR3 1501 aa17.07■□□□□ 0.32
NEK9-202ENST00000553823 ARID4BQ4LE39 1312 aaPredicted RBP17.07■□□□□ 0.32
NEK9-202ENST00000553823 CFAP65Q6ZU64 1925 aaKnown RBP17.06■□□□□ 0.32
NEK9-202ENST00000553823 TIMELESSQ9UNS1 1208 aa17.05■□□□□ 0.32
NEK9-202ENST00000553823 CAMSAP1Q5T5Y3 1602 aa17.05■□□□□ 0.32
NEK9-202ENST00000553823 MLECQ14165 292 aa17.04■□□□□ 0.32
NEK9-202ENST00000553823 RPRD2Q5VT52 1461 aaKnown RBP17.04■□□□□ 0.32
NEK9-202ENST00000553823 SPHKAPQ2M3C7 1700 aa17.04■□□□□ 0.32
NEK9-202ENST00000553823 PLA2R1Q13018 1463 aa17.03■□□□□ 0.32
NEK9-202ENST00000553823 PTPRTO14522 1441 aa17.02■□□□□ 0.31
NEK9-202ENST00000553823 NPATQ14207 1427 aa17.01■□□□□ 0.31
NEK9-202ENST00000553823 ARHGAP31Q2M1Z3 1444 aa17.01■□□□□ 0.31
NEK9-202ENST00000553823 TONSLQ96HA7 1378 aa17.01■□□□□ 0.31
NEK9-202ENST00000553823 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
NEK9-202ENST00000553823 CCDC144AA2RUR9 1427 aa17■□□□□ 0.31
NEK9-202ENST00000553823 TRPM2O94759 1503 aa17■□□□□ 0.31
NEK9-202ENST00000553823 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
NEK9-202ENST00000553823 CNTLNQ9NXG0 1405 aa16.96■□□□□ 0.3
NEK9-202ENST00000553823 NOS1P29475 1434 aa16.95■□□□□ 0.3
NEK9-202ENST00000553823 CLTCL1P53675 1640 aa16.94■□□□□ 0.3
NEK9-202ENST00000553823 PREX1Q8TCU6 1659 aa16.94■□□□□ 0.3
NEK9-202ENST00000553823 FER1L4A9Z1Z3 1794 aa16.93■□□□□ 0.3
NEK9-202ENST00000553823 MROH2AA6NES4 1674 aa16.93■□□□□ 0.3
NEK9-202ENST00000553823 L3MBTL2Q969R5 705 aa16.92■□□□□ 0.3
NEK9-202ENST00000553823 KIF1BO60333 1816 aa16.91■□□□□ 0.3
NEK9-202ENST00000553823 ZMYM3Q14202 1370 aa16.91■□□□□ 0.3
NEK9-202ENST00000553823 PPP1R15AO75807 674 aaPredicted RBP16.91■□□□□ 0.3
NEK9-202ENST00000553823 ERVK-7P63135 1459 aa16.9■□□□□ 0.3
NEK9-202ENST00000553823 SYNMO15061 1565 aa16.89■□□□□ 0.3
NEK9-202ENST00000553823 FBXO31Q5XUX0 539 aaPredicted RBP16.89■□□□□ 0.29
NEK9-202ENST00000553823 UGGT1Q9NYU2 1555 aa16.89■□□□□ 0.29
NEK9-202ENST00000553823 PIK3C2BO00750 1634 aa16.88■□□□□ 0.29
NEK9-202ENST00000553823 SPATA31E1Q6ZUB1 1445 aa16.87■□□□□ 0.29
NEK9-202ENST00000553823 SPATA31D1Q6ZQQ2 1576 aa16.87■□□□□ 0.29
NEK9-202ENST00000553823 NEURL4Q96JN8 1562 aa16.87■□□□□ 0.29
NEK9-202ENST00000553823 ADAMTSL3P82987 1691 aa16.86■□□□□ 0.29
NEK9-202ENST00000553823 RGL3Q3MIN7 710 aa16.86■□□□□ 0.29
NEK9-202ENST00000553823 SLC52A1Q9NWF4 448 aa16.86■□□□□ 0.29
NEK9-202ENST00000553823 MADDQ8WXG6 1647 aa16.85■□□□□ 0.29
NEK9-202ENST00000553823 C3P01024 1663 aa16.85■□□□□ 0.29
NEK9-202ENST00000553823 IDI1Q13907 227 aa16.83■□□□□ 0.28
NEK9-202ENST00000553823 RIMS1Q86UR5 1692 aaKnown RBP16.83■□□□□ 0.28
NEK9-202ENST00000553823 DCAF11Q8TEB1 546 aa16.82■□□□□ 0.28
NEK9-202ENST00000553823 ADGRB3O60242 1522 aa16.81■□□□□ 0.28
NEK9-202ENST00000553823 CHGAP10645 457 aaKnown RBP16.81■□□□□ 0.28
NEK9-202ENST00000553823 TNRQ92752 1358 aa16.8■□□□□ 0.28
NEK9-202ENST00000553823 CEBPAP49715 358 aaPredicted RBP16.8■□□□□ 0.28
NEK9-202ENST00000553823 KDM2AQ9Y2K7 1162 aa16.8■□□□□ 0.28
NEK9-202ENST00000553823 MYO5BQ9ULV0 1848 aa16.79■□□□□ 0.28
NEK9-202ENST00000553823 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
NEK9-202ENST00000553823 NBPF8Q3BBV2 869 aa16.78■□□□□ 0.28
NEK9-202ENST00000553823 STAC3Q96MF2 364 aa16.78■□□□□ 0.28
NEK9-202ENST00000553823 TMEM131LA2VDJ0 1609 aa16.78■□□□□ 0.28
NEK9-202ENST00000553823 ZNF326Q5BKZ1 582 aaKnown RBP16.77■□□□□ 0.28
NEK9-202ENST00000553823 IFT172Q9UG01 1749 aa16.76■□□□□ 0.27
NEK9-202ENST00000553823 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
NEK9-202ENST00000553823 SETD1BQ9UPS6 1966 aaKnown RBP16.76■□□□□ 0.27
NEK9-202ENST00000553823 RPGRIP1LQ68CZ1 1315 aa16.75■□□□□ 0.27
NEK9-202ENST00000553823 PPLO60437 1756 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms