RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 RICTORQ6R327 1708 aa17.94■□□□□ 0.46
SHMT2-205ENST00000553474 HNRNPMP52272 730 aaKnown RBP eCLIP17.94■□□□□ 0.46
SHMT2-205ENST00000553474 UHRF1BP1Q6BDS2 1440 aa17.92■□□□□ 0.46
SHMT2-205ENST00000553474 ARID4BQ4LE39 1312 aaPredicted RBP17.92■□□□□ 0.46
SHMT2-205ENST00000553474 NBPF8Q3BBV2 869 aa17.92■□□□□ 0.46
SHMT2-205ENST00000553474 PKD2Q13563 968 aa17.91■□□□□ 0.46
SHMT2-205ENST00000553474 KIF15Q9NS87 1388 aa17.91■□□□□ 0.46
SHMT2-205ENST00000553474 FRMPD1Q5SYB0 1578 aa17.91■□□□□ 0.46
SHMT2-205ENST00000553474 POGZQ7Z3K3 1410 aa17.9■□□□□ 0.46
SHMT2-205ENST00000553474 TRAPPC8Q9Y2L5 1435 aa17.9■□□□□ 0.46
SHMT2-205ENST00000553474 NUP155O75694 1391 aa17.9■□□□□ 0.46
SHMT2-205ENST00000553474 ZNF518AQ6AHZ1 1483 aa17.88■□□□□ 0.45
SHMT2-205ENST00000553474 RAPGEF3O95398 923 aa17.88■□□□□ 0.45
SHMT2-205ENST00000553474 COL17A1Q9UMD9 1497 aaPredicted RBP17.88■□□□□ 0.45
SHMT2-205ENST00000553474 RALGAPBQ86X10 1494 aa17.87■□□□□ 0.45
SHMT2-205ENST00000553474 PLXNC1O60486 1568 aa17.87■□□□□ 0.45
SHMT2-205ENST00000553474 HECW2Q9P2P5 1572 aa17.86■□□□□ 0.45
SHMT2-205ENST00000553474 NEFLP07196 543 aa17.86■□□□□ 0.45
SHMT2-205ENST00000553474 UNC13BO14795 1591 aa17.85■□□□□ 0.45
SHMT2-205ENST00000553474 KDM5CP41229 1560 aa17.85■□□□□ 0.45
SHMT2-205ENST00000553474 AFAP1Q8N556 730 aa17.85■□□□□ 0.45
SHMT2-205ENST00000553474 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
SHMT2-205ENST00000553474 INO80Q9ULG1 1556 aaPredicted RBP17.83■□□□□ 0.45
SHMT2-205ENST00000553474 KIF7Q2M1P5 1343 aa17.83■□□□□ 0.45
SHMT2-205ENST00000553474 PRKRIP1Q9H875 184 aaPredicted RBP17.83■□□□□ 0.44
SHMT2-205ENST00000553474 ATP7AQ04656 1500 aa17.82■□□□□ 0.44
SHMT2-205ENST00000553474 ZFYVE16Q7Z3T8 1539 aa17.82■□□□□ 0.44
SHMT2-205ENST00000553474 FAM135AQ9P2D6 1515 aa17.82■□□□□ 0.44
SHMT2-205ENST00000553474 ROCK2O75116 1388 aaKnown RBP17.82■□□□□ 0.44
SHMT2-205ENST00000553474 USP47Q96K76 1375 aa17.82■□□□□ 0.44
SHMT2-205ENST00000553474 KIDINS220Q9ULH0 1771 aa17.82■□□□□ 0.44
SHMT2-205ENST00000553474 ZMYM4Q5VZL5 1548 aa17.81■□□□□ 0.44
SHMT2-205ENST00000553474 C11orf95C9JLR9 678 aaPredicted RBP17.81■□□□□ 0.44
SHMT2-205ENST00000553474 SPAG9O60271 1321 aaKnown RBP17.81■□□□□ 0.44
SHMT2-205ENST00000553474 ABCA6Q8N139 1617 aa17.79■□□□□ 0.44
SHMT2-205ENST00000553474 IQGAP3Q86VI3 1631 aa17.78■□□□□ 0.44
SHMT2-205ENST00000553474 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.44
SHMT2-205ENST00000553474 ARHGEF40Q8TER5 1519 aa17.76■□□□□ 0.43
SHMT2-205ENST00000553474 FKBP8Q14318 412 aa17.76■□□□□ 0.43
SHMT2-205ENST00000553474 BCORL1Q5H9F3 1711 aa17.76■□□□□ 0.43
SHMT2-205ENST00000553474 ERBINQ96RT1 1412 aa17.76■□□□□ 0.43
SHMT2-205ENST00000553474 HNRNPUQ00839 825 aaKnown RBP eCLIP17.76■□□□□ 0.43
SHMT2-205ENST00000553474 DIP2CQ9Y2E4 1556 aa17.75■□□□□ 0.43
SHMT2-205ENST00000553474 MAGI2Q86UL8 1455 aa17.75■□□□□ 0.43
SHMT2-205ENST00000553474 MLH3Q9UHC1 1453 aa17.75■□□□□ 0.43
SHMT2-205ENST00000553474 YEATS2Q9ULM3 1422 aa17.75■□□□□ 0.43
SHMT2-205ENST00000553474 ATP10AO60312 1499 aa17.74■□□□□ 0.43
SHMT2-205ENST00000553474 CCDC144AA2RUR9 1427 aa17.73■□□□□ 0.43
SHMT2-205ENST00000553474 RTEL1-TNFRSF6BF6WH68 1400 aa17.73■□□□□ 0.43
SHMT2-205ENST00000553474 LAMC1P11047 1609 aa17.73■□□□□ 0.43
SHMT2-205ENST00000553474 ERICH6BQ5W0A0 696 aa17.72■□□□□ 0.43
SHMT2-205ENST00000553474 KTN1Q86UP2 1357 aaKnown RBP17.71■□□□□ 0.43
SHMT2-205ENST00000553474 DHX29Q7Z478 1369 aaKnown RBP17.7■□□□□ 0.42
SHMT2-205ENST00000553474 TRPM1Q7Z4N2 1603 aa17.7■□□□□ 0.42
SHMT2-205ENST00000553474 ZBED9Q6R2W3 1325 aa17.69■□□□□ 0.42
SHMT2-205ENST00000553474 CARD11Q9BXL7 1154 aa17.69■□□□□ 0.42
SHMT2-205ENST00000553474 MRS2Q9HD23 443 aa17.69■□□□□ 0.42
SHMT2-205ENST00000553474 EIF2AK4Q9P2K8 1649 aaKnown RBP17.69■□□□□ 0.42
SHMT2-205ENST00000553474 SIGLEC1Q9BZZ2 1709 aa17.67■□□□□ 0.42
SHMT2-205ENST00000553474 PRAG1Q86YV5 1406 aa17.67■□□□□ 0.42
SHMT2-205ENST00000553474 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
SHMT2-205ENST00000553474 A2MP01023 1474 aa17.66■□□□□ 0.42
SHMT2-205ENST00000553474 GPRASP1Q5JY77 1395 aa17.66■□□□□ 0.42
SHMT2-205ENST00000553474 DCAF11Q8TEB1 546 aa17.66■□□□□ 0.42
SHMT2-205ENST00000553474 E9PCH4 1651 aa17.65■□□□□ 0.42
SHMT2-205ENST00000553474 PLA2R1Q13018 1463 aa17.63■□□□□ 0.41
SHMT2-205ENST00000553474 TSHZ2Q9NRE2 1034 aa17.62■□□□□ 0.41
SHMT2-205ENST00000553474 REREQ9P2R6 1566 aa17.61■□□□□ 0.41
SHMT2-205ENST00000553474 CCDC184Q52MB2 194 aa17.61■□□□□ 0.41
SHMT2-205ENST00000553474 STAC3Q96MF2 364 aa17.6■□□□□ 0.41
SHMT2-205ENST00000553474 PRDM15P57071 1507 aaPredicted RBP17.6■□□□□ 0.41
SHMT2-205ENST00000553474 FAM9BQ8IZU0 186 aa17.59■□□□□ 0.41
SHMT2-205ENST00000553474 DEPDC5O75140 1603 aa17.58■□□□□ 0.41
SHMT2-205ENST00000553474 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
SHMT2-205ENST00000553474 KDM2AQ9Y2K7 1162 aa17.58■□□□□ 0.4
SHMT2-205ENST00000553474 RALBP1Q15311 655 aa17.57■□□□□ 0.4
SHMT2-205ENST00000553474 BCANQ96GW7 911 aa17.57■□□□□ 0.4
SHMT2-205ENST00000553474 RNF17Q9BXT8 1623 aaKnown RBP17.56■□□□□ 0.4
SHMT2-205ENST00000553474 KIF3BO15066 747 aa17.56■□□□□ 0.4
SHMT2-205ENST00000553474 BRD4O60885 1362 aaPredicted RBP17.55■□□□□ 0.4
SHMT2-205ENST00000553474 WASHC2CQ9Y4E1 1318 aa17.55■□□□□ 0.4
SHMT2-205ENST00000553474 NEURL4Q96JN8 1562 aa17.55■□□□□ 0.4
SHMT2-205ENST00000553474 AGLP35573 1532 aa17.54■□□□□ 0.4
SHMT2-205ENST00000553474 MLECQ14165 292 aa17.54■□□□□ 0.4
SHMT2-205ENST00000553474 TRPM2O94759 1503 aa17.54■□□□□ 0.4
SHMT2-205ENST00000553474 CEP152O94986 1710 aa17.53■□□□□ 0.4
SHMT2-205ENST00000553474 TET3O43151 1660 aa17.53■□□□□ 0.4
SHMT2-205ENST00000553474 MROH1Q8NDA8 1641 aa17.53■□□□□ 0.4
SHMT2-205ENST00000553474 SMG6Q86US8 1419 aaKnown RBP17.52■□□□□ 0.4
SHMT2-205ENST00000553474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.4
SHMT2-205ENST00000553474 SPHKAPQ2M3C7 1700 aa17.52■□□□□ 0.39
SHMT2-205ENST00000553474 MYBBP1AQ9BQG0 1328 aaKnown RBP17.52■□□□□ 0.39
SHMT2-205ENST00000553474 GGT6Q6P531 493 aa17.51■□□□□ 0.39
SHMT2-205ENST00000553474 FER1L4A9Z1Z3 1794 aa17.51■□□□□ 0.39
SHMT2-205ENST00000553474 PTPRTO14522 1441 aa17.5■□□□□ 0.39
SHMT2-205ENST00000553474 POLR3GLQ9BT43 218 aa17.5■□□□□ 0.39
SHMT2-205ENST00000553474 VWDEQ8N2E2 1590 aa17.5■□□□□ 0.39
SHMT2-205ENST00000553474 TMC1Q8TDI8 760 aa17.49■□□□□ 0.39
SHMT2-205ENST00000553474 PNISRQ8TF01 805 aaKnown RBP17.49■□□□□ 0.39
SHMT2-205ENST00000553474 CLTCQ00610 1675 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms