RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 KDM5DQ9BY66 1539 aa24.71■■□□□ 1.55
CDK4-215ENST00000553237 RRP7BPQ9NSQ0 103 aa24.71■■□□□ 1.55
CDK4-215ENST00000553237 NCOA1Q15788 1441 aa24.7■■□□□ 1.55
CDK4-215ENST00000553237 CERKQ8TCT0 537 aa24.7■■□□□ 1.54
CDK4-215ENST00000553237 CAMSAP1Q5T5Y3 1602 aa24.69■■□□□ 1.54
CDK4-215ENST00000553237 NCKAP5LQ9HCH0 1330 aa24.68■■□□□ 1.54
CDK4-215ENST00000553237 MYO3AQ8NEV4 1616 aa24.68■■□□□ 1.54
CDK4-215ENST00000553237 TCOF1Q13428 1488 aaKnown RBP24.67■■□□□ 1.54
CDK4-215ENST00000553237 CHIC2Q9UKJ5 165 aa24.67■■□□□ 1.54
CDK4-215ENST00000553237 PTPRTO14522 1441 aa24.67■■□□□ 1.54
CDK4-215ENST00000553237 DAPK1P53355 1430 aa24.67■■□□□ 1.54
CDK4-215ENST00000553237 KIF15Q9NS87 1388 aa24.67■■□□□ 1.54
CDK4-215ENST00000553237 TNRQ92752 1358 aa24.66■■□□□ 1.54
CDK4-215ENST00000553237 FAM135AQ9P2D6 1515 aa24.66■■□□□ 1.54
CDK4-215ENST00000553237 PZPP20742 1482 aa24.65■■□□□ 1.54
CDK4-215ENST00000553237 CEP170BQ9Y4F5 1589 aaPredicted RBP24.65■■□□□ 1.54
CDK4-215ENST00000553237 DUOX2Q9NRD8 1548 aa24.65■■□□□ 1.54
CDK4-215ENST00000553237 SHANK2Q9UPX8 1470 aa24.64■■□□□ 1.54
CDK4-215ENST00000553237 FAM50AQ14320 339 aaKnown RBP24.64■■□□□ 1.54
CDK4-215ENST00000553237 RNF17Q9BXT8 1623 aaKnown RBP24.63■■□□□ 1.53
CDK4-215ENST00000553237 DNMT1P26358 1616 aaKnown RBP24.61■■□□□ 1.53
CDK4-215ENST00000553237 A2ML1A8K2U0 1454 aa24.61■■□□□ 1.53
CDK4-215ENST00000553237 CROCC2H7BZ55 1655 aa24.61■■□□□ 1.53
CDK4-215ENST00000553237 ZNF142P52746 1687 aaPredicted RBP24.61■■□□□ 1.53
CDK4-215ENST00000553237 EIF2AK4Q9P2K8 1649 aaKnown RBP24.61■■□□□ 1.53
CDK4-215ENST00000553237 ABCC3O15438 1527 aa24.6■■□□□ 1.53
CDK4-215ENST00000553237 PKD2Q13563 968 aa24.59■■□□□ 1.53
CDK4-215ENST00000553237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.59■■□□□ 1.53
CDK4-215ENST00000553237 MROH1Q8NDA8 1641 aa24.57■■□□□ 1.52
CDK4-215ENST00000553237 ANKRD30AQ9BXX3 1397 aa24.57■■□□□ 1.52
CDK4-215ENST00000553237 PPARGC1BQ86YN6 1023 aaKnown RBP24.57■■□□□ 1.52
CDK4-215ENST00000553237 PLA2R1Q13018 1463 aa24.57■■□□□ 1.52
CDK4-215ENST00000553237 ERBINQ96RT1 1412 aa24.56■■□□□ 1.52
CDK4-215ENST00000553237 ZC3H13Q5T200 1668 aaKnown RBP24.52■■□□□ 1.52
CDK4-215ENST00000553237 CEP152O94986 1710 aa24.51■■□□□ 1.51
CDK4-215ENST00000553237 THEMISQ8N1K5 641 aaPredicted RBP24.5■■□□□ 1.51
CDK4-215ENST00000553237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.5■■□□□ 1.518e-9■■■□□ 17.4
CDK4-215ENST00000553237 NLRP1Q9C000 1473 aa24.5■■□□□ 1.51
CDK4-215ENST00000553237 ZNF335Q9H4Z2 1342 aaPredicted RBP24.49■■□□□ 1.51
CDK4-215ENST00000553237 ERVK-7P63135 1459 aa24.49■■□□□ 1.51
CDK4-215ENST00000553237 LTBP4Q8N2S1 1624 aa24.48■■□□□ 1.51
CDK4-215ENST00000553237 SPATA31D1Q6ZQQ2 1576 aa24.47■■□□□ 1.51
CDK4-215ENST00000553237 PRDM15P57071 1507 aaPredicted RBP24.47■■□□□ 1.51
CDK4-215ENST00000553237 KANK1Q14678 1352 aa24.47■■□□□ 1.51
CDK4-215ENST00000553237 CFAP65Q6ZU64 1925 aaKnown RBP24.46■■□□□ 1.51
CDK4-215ENST00000553237 ANKLE2Q86XL3 938 aa24.46■■□□□ 1.51
CDK4-215ENST00000553237 UGGT1Q9NYU2 1555 aa24.46■■□□□ 1.51
CDK4-215ENST00000553237 ADGRL2O95490 1459 aa24.45■■□□□ 1.51
CDK4-215ENST00000553237 ARHGAP31Q2M1Z3 1444 aa24.42■■□□□ 1.5
CDK4-215ENST00000553237 DEPDC5O75140 1603 aa24.42■■□□□ 1.5
CDK4-215ENST00000553237 ITGAEP38570 1179 aa24.4■■□□□ 1.5
CDK4-215ENST00000553237 ANKRD50Q9ULJ7 1429 aa24.39■■□□□ 1.5
CDK4-215ENST00000553237 NEURL4Q96JN8 1562 aa24.38■■□□□ 1.49
CDK4-215ENST00000553237 POLR1AO95602 1720 aaPredicted RBP24.36■■□□□ 1.49
CDK4-215ENST00000553237 VWDEQ8N2E2 1590 aa24.35■■□□□ 1.49
CDK4-215ENST00000553237 LMTK2Q8IWU2 1503 aa24.35■■□□□ 1.49
CDK4-215ENST00000553237 NPHP4O75161 1426 aaPredicted RBP24.34■■□□□ 1.49
CDK4-215ENST00000553237 IQSEC2Q5JU85 1478 aa24.32■■□□□ 1.48
CDK4-215ENST00000553237 STAG3Q9UJ98 1225 aa24.31■■□□□ 1.48
CDK4-215ENST00000553237 IDI1Q13907 227 aa24.3■■□□□ 1.48
CDK4-215ENST00000553237 MED14O60244 1454 aa24.3■■□□□ 1.48
CDK4-215ENST00000553237 UBR1Q8IWV7 1749 aa24.3■■□□□ 1.48
CDK4-215ENST00000553237 ROCK1Q13464 1354 aa24.29■■□□□ 1.48
CDK4-215ENST00000553237 TXNDC2Q86VQ3 553 aa24.29■■□□□ 1.48
CDK4-215ENST00000553237 LTKP29376 864 aa24.28■■□□□ 1.48
CDK4-215ENST00000553237 EFCAB6Q5THR3 1501 aa24.27■■□□□ 1.48
CDK4-215ENST00000553237 UBAP1LF5GYI3 381 aa24.27■■□□□ 1.48
CDK4-215ENST00000553237 NOS1P29475 1434 aa24.25■■□□□ 1.47
CDK4-215ENST00000553237 PIK3C2BO00750 1634 aa24.24■■□□□ 1.47
CDK4-215ENST00000553237 EID1Q9Y6B2 187 aa24.24■■□□□ 1.47
CDK4-215ENST00000553237 SCAF11Q99590 1463 aaKnown RBP24.24■■□□□ 1.47
CDK4-215ENST00000553237 ARHGAP23Q9P227 1491 aa24.23■■□□□ 1.47
CDK4-215ENST00000553237 SYNMO15061 1565 aa24.23■■□□□ 1.47
CDK4-215ENST00000553237 IQGAP1P46940 1657 aa24.23■■□□□ 1.47
CDK4-215ENST00000553237 SLIT1O75093 1534 aa24.21■■□□□ 1.47
CDK4-215ENST00000553237 TMEM2Q9UHN6 1383 aa24.21■■□□□ 1.47
CDK4-215ENST00000553237 CPS1P31327 1500 aa24.2■■□□□ 1.47
CDK4-215ENST00000553237 SLC52A1Q9NWF4 448 aa24.2■■□□□ 1.46
CDK4-215ENST00000553237 UNC13BO14795 1591 aa24.19■■□□□ 1.46
CDK4-215ENST00000553237 RPRD2Q5VT52 1461 aaKnown RBP24.18■■□□□ 1.46
CDK4-215ENST00000553237 NUP155O75694 1391 aa24.17■■□□□ 1.46
CDK4-215ENST00000553237 TET3O43151 1660 aa24.17■■□□□ 1.46
CDK4-215ENST00000553237 RRBP1Q9P2E9 1410 aaKnown RBP24.17■■□□□ 1.46
CDK4-215ENST00000553237 SCAF1Q9H7N4 1312 aaKnown RBP24.13■■□□□ 1.45
CDK4-215ENST00000553237 ADGRB3O60242 1522 aa24.12■■□□□ 1.45
CDK4-215ENST00000553237 PIP4K2BP78356 416 aa24.12■■□□□ 1.45
CDK4-215ENST00000553237 GCC2Q8IWJ2 1684 aa24.11■■□□□ 1.45
CDK4-215ENST00000553237 TOM1O60784 492 aa24.11■■□□□ 1.45
CDK4-215ENST00000553237 CHGAP10645 457 aaKnown RBP24.11■■□□□ 1.45
CDK4-215ENST00000553237 SENP3Q9H4L4 574 aaPredicted RBP24.11■■□□□ 1.45
CDK4-215ENST00000553237 KDM5AP29375 1690 aaKnown RBP24.11■■□□□ 1.45
CDK4-215ENST00000553237 STRCP1A6NGW2 1772 aa24.1■■□□□ 1.45
CDK4-215ENST00000553237 IQGAP3Q86VI3 1631 aa24.1■■□□□ 1.45
CDK4-215ENST00000553237 BCANQ96GW7 911 aa24.09■■□□□ 1.45
CDK4-215ENST00000553237 SLC26A8Q96RN1 970 aa24.09■■□□□ 1.45
CDK4-215ENST00000553237 E9PCH4 1651 aa24.08■■□□□ 1.45
CDK4-215ENST00000553237 LRRC7Q96NW7 1537 aa24.08■■□□□ 1.45
CDK4-215ENST00000553237 NAIPQ13075 1403 aa24.03■■□□□ 1.44
CDK4-215ENST00000553237 PPP1R15AO75807 674 aaPredicted RBP24.03■■□□□ 1.44
CDK4-215ENST00000553237 RIMS2Q9UQ26 1411 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms