RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 TRAPPC8Q9Y2L5 1435 aa14.17□□□□□ -0.14
CNOT2-243ENST00000553078 EIF2AK4Q9P2K8 1649 aaKnown RBP14.17□□□□□ -0.14
CNOT2-243ENST00000553078 INO80Q9ULG1 1556 aaPredicted RBP14.17□□□□□ -0.14
CNOT2-243ENST00000553078 USP47Q96K76 1375 aa14.16□□□□□ -0.14
CNOT2-243ENST00000553078 CCDC7Q96M83 1385 aa14.16□□□□□ -0.14
CNOT2-243ENST00000553078 ARID4BQ4LE39 1312 aaPredicted RBP14.15□□□□□ -0.14
CNOT2-243ENST00000553078 NBPF8Q3BBV2 869 aa14.15□□□□□ -0.14
CNOT2-243ENST00000553078 ZNF518AQ6AHZ1 1483 aa14.14□□□□□ -0.15
CNOT2-243ENST00000553078 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
CNOT2-243ENST00000553078 SCAPERQ9BY12 1400 aa14.14□□□□□ -0.15
CNOT2-243ENST00000553078 WASHC2AQ641Q2 1341 aa14.14□□□□□ -0.15
CNOT2-243ENST00000553078 CARD11Q9BXL7 1154 aa14.13□□□□□ -0.15
CNOT2-243ENST00000553078 ATP10AO60312 1499 aa14.12□□□□□ -0.15
CNOT2-243ENST00000553078 KDM5CP41229 1560 aa14.12□□□□□ -0.15
CNOT2-243ENST00000553078 DCAF11Q8TEB1 546 aa14.11□□□□□ -0.15
CNOT2-243ENST00000553078 CD109Q6YHK3 1445 aa14.1□□□□□ -0.15
CNOT2-243ENST00000553078 SPATA31E1Q6ZUB1 1445 aa14.1□□□□□ -0.15
CNOT2-243ENST00000553078 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
CNOT2-243ENST00000553078 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
CNOT2-243ENST00000553078 TET3O43151 1660 aa14.1□□□□□ -0.15
CNOT2-243ENST00000553078 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
CNOT2-243ENST00000553078 TRPM2O94759 1503 aa14.09□□□□□ -0.15
CNOT2-243ENST00000553078 LAMC1P11047 1609 aa14.08□□□□□ -0.16
CNOT2-243ENST00000553078 DHX29Q7Z478 1369 aaKnown RBP14.08□□□□□ -0.16
CNOT2-243ENST00000553078 PRAG1Q86YV5 1406 aa14.07□□□□□ -0.16
CNOT2-243ENST00000553078 PRDM15P57071 1507 aaPredicted RBP14.07□□□□□ -0.16
CNOT2-243ENST00000553078 AFAP1Q8N556 730 aa14.07□□□□□ -0.16
CNOT2-243ENST00000553078 STAC3Q96MF2 364 aa14.07□□□□□ -0.16
CNOT2-243ENST00000553078 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
CNOT2-243ENST00000553078 NEO1Q92859 1461 aa14.06□□□□□ -0.16
CNOT2-243ENST00000553078 POGZQ7Z3K3 1410 aa14.06□□□□□ -0.16
CNOT2-243ENST00000553078 HECW2Q9P2P5 1572 aa14.05□□□□□ -0.16
CNOT2-243ENST00000553078 TRPM1Q7Z4N2 1603 aa14.05□□□□□ -0.16
CNOT2-243ENST00000553078 SPHKAPQ2M3C7 1700 aa14.05□□□□□ -0.16
CNOT2-243ENST00000553078 A2MP01023 1474 aa14.05□□□□□ -0.16
CNOT2-243ENST00000553078 POLR3GLQ9BT43 218 aa14.04□□□□□ -0.16
CNOT2-243ENST00000553078 KIF3BO15066 747 aa14.03□□□□□ -0.16
CNOT2-243ENST00000553078 CEP152O94986 1710 aa14.02□□□□□ -0.16
CNOT2-243ENST00000553078 E9PCH4 1651 aa14.02□□□□□ -0.16
CNOT2-243ENST00000553078 VWDEQ8N2E2 1590 aa14.02□□□□□ -0.16
CNOT2-243ENST00000553078 PLA2R1Q13018 1463 aa14.02□□□□□ -0.16
CNOT2-243ENST00000553078 NEFLP07196 543 aa14.02□□□□□ -0.17
CNOT2-243ENST00000553078 RGL3Q3MIN7 710 aa14.02□□□□□ -0.17
CNOT2-243ENST00000553078 MLH3Q9UHC1 1453 aa14.01□□□□□ -0.17
CNOT2-243ENST00000553078 NEURL4Q96JN8 1562 aa14□□□□□ -0.17
CNOT2-243ENST00000553078 GPRASP1Q5JY77 1395 aa14□□□□□ -0.17
CNOT2-243ENST00000553078 RNF17Q9BXT8 1623 aaKnown RBP14□□□□□ -0.17
CNOT2-243ENST00000553078 EFCAB6Q5THR3 1501 aa14□□□□□ -0.17
CNOT2-243ENST00000553078 LMTK2Q8IWU2 1503 aa14□□□□□ -0.17
CNOT2-243ENST00000553078 PTPRTO14522 1441 aa13.99□□□□□ -0.17
CNOT2-243ENST00000553078 KIDINS220Q9ULH0 1771 aa13.99□□□□□ -0.17
CNOT2-243ENST00000553078 EIF3AQ14152 1382 aaKnown RBP13.98□□□□□ -0.17
CNOT2-243ENST00000553078 KTN1Q86UP2 1357 aaKnown RBP13.98□□□□□ -0.17
CNOT2-243ENST00000553078 PRKRIP1Q9H875 184 aaPredicted RBP13.97□□□□□ -0.17
CNOT2-243ENST00000553078 MRS2Q9HD23 443 aa13.96□□□□□ -0.17
CNOT2-243ENST00000553078 CLTCL1P53675 1640 aa13.96□□□□□ -0.17
CNOT2-243ENST00000553078 GLI2P10070 1586 aa13.96□□□□□ -0.18
CNOT2-243ENST00000553078 BCORL1Q5H9F3 1711 aa13.95□□□□□ -0.18
CNOT2-243ENST00000553078 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
CNOT2-243ENST00000553078 ST20-MTHFSA0A0A6YYL1 179 aa13.95□□□□□ -0.18
CNOT2-243ENST00000553078 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
CNOT2-243ENST00000553078 MADDQ8WXG6 1647 aa13.94□□□□□ -0.18
CNOT2-243ENST00000553078 C11orf95C9JLR9 678 aaPredicted RBP13.94□□□□□ -0.18
CNOT2-243ENST00000553078 TMF1P82094 1093 aa13.94□□□□□ -0.18
CNOT2-243ENST00000553078 HNRNPUQ00839 825 aaKnown RBP eCLIP13.94□□□□□ -0.18
CNOT2-243ENST00000553078 CDCA8Q53HL2 280 aa13.94□□□□□ -0.18
CNOT2-243ENST00000553078 MAP3K4Q9Y6R4 1608 aa13.93□□□□□ -0.18
CNOT2-243ENST00000553078 COL17A1Q9UMD9 1497 aaPredicted RBP13.93□□□□□ -0.18
CNOT2-243ENST00000553078 MYOM2P54296 1465 aa13.93□□□□□ -0.18
CNOT2-243ENST00000553078 KIF1BO60333 1816 aa13.92□□□□□ -0.18
CNOT2-243ENST00000553078 ZC3H13Q5T200 1668 aaKnown RBP13.91□□□□□ -0.18
CNOT2-243ENST00000553078 RIMBP3CA6NJZ7 1639 aa13.91□□□□□ -0.18
CNOT2-243ENST00000553078 RIMBP3BA6NNM3 1639 aa13.91□□□□□ -0.18
CNOT2-243ENST00000553078 ABCA6Q8N139 1617 aa13.91□□□□□ -0.18
CNOT2-243ENST00000553078 RIMBP3Q9UFD9 1639 aa13.91□□□□□ -0.18
CNOT2-243ENST00000553078 PPRC1Q5VV67 1664 aaKnown RBP13.91□□□□□ -0.18
CNOT2-243ENST00000553078 KIAA1210Q9ULL0 1709 aa13.9□□□□□ -0.18
CNOT2-243ENST00000553078 SCAF11Q99590 1463 aaKnown RBP13.9□□□□□ -0.18
CNOT2-243ENST00000553078 RALBP1Q15311 655 aa13.89□□□□□ -0.19
CNOT2-243ENST00000553078 DIP2CQ9Y2E4 1556 aa13.88□□□□□ -0.19
CNOT2-243ENST00000553078 FRMPD1Q5SYB0 1578 aa13.88□□□□□ -0.19
CNOT2-243ENST00000553078 CYB5RLQ6IPT4 315 aa13.87□□□□□ -0.19
CNOT2-243ENST00000553078 GGT6Q6P531 493 aa13.87□□□□□ -0.19
CNOT2-243ENST00000553078 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
CNOT2-243ENST00000553078 ABCC3O15438 1527 aa13.86□□□□□ -0.19
CNOT2-243ENST00000553078 IQGAP1P46940 1657 aa13.86□□□□□ -0.19
CNOT2-243ENST00000553078 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
CNOT2-243ENST00000553078 RICTORQ6R327 1708 aa13.86□□□□□ -0.19
CNOT2-243ENST00000553078 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
CNOT2-243ENST00000553078 CAMSAP1Q5T5Y3 1602 aa13.86□□□□□ -0.19
CNOT2-243ENST00000553078 ADGRB3O60242 1522 aa13.85□□□□□ -0.19
CNOT2-243ENST00000553078 NBPF1Q3BBV0 1214 aa13.85□□□□□ -0.19
CNOT2-243ENST00000553078 ZMYM4Q5VZL5 1548 aa13.85□□□□□ -0.19
CNOT2-243ENST00000553078 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
CNOT2-243ENST00000553078 DIP2BQ9P265 1576 aa13.84□□□□□ -0.19
CNOT2-243ENST00000553078 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
CNOT2-243ENST00000553078 TMC1Q8TDI8 760 aa13.84□□□□□ -0.19
CNOT2-243ENST00000553078 SUPT16HQ9Y5B9 1047 aaKnown RBP13.84□□□□□ -0.19
CNOT2-243ENST00000553078 ZBED9Q6R2W3 1325 aa13.84□□□□□ -0.19
CNOT2-243ENST00000553078 RPGRIP1LQ68CZ1 1315 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms