RNA–Protein interactions for RNA: ENST00000553020.5

CNOT2-242, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-242ENST00000553020 WDR7Q9Y4E6 1490 aa14.42□□□□□ -0.1
CNOT2-242ENST00000553020 SYCP2Q9BX26 1530 aa14.41□□□□□ -0.1
CNOT2-242ENST00000553020 KDM5DQ9BY66 1539 aa14.41□□□□□ -0.1
CNOT2-242ENST00000553020 YTHDC1Q96MU7 727 aaKnown RBP14.41□□□□□ -0.1
CNOT2-242ENST00000553020 CDC42BPBQ9Y5S2 1711 aa14.41□□□□□ -0.1
CNOT2-242ENST00000553020 ANKRD30BQ9BXX2 1392 aa14.4□□□□□ -0.1
CNOT2-242ENST00000553020 RAPGEF3O95398 923 aa14.4□□□□□ -0.1
CNOT2-242ENST00000553020 PZPP20742 1482 aa14.39□□□□□ -0.11
CNOT2-242ENST00000553020 SETD1AO15047 1707 aaKnown RBP14.39□□□□□ -0.11
CNOT2-242ENST00000553020 PLXNC1O60486 1568 aa14.39□□□□□ -0.11
CNOT2-242ENST00000553020 DENND4BO75064 1496 aaPredicted RBP14.38□□□□□ -0.11
CNOT2-242ENST00000553020 MBD5Q9P267 1494 aa14.38□□□□□ -0.11
CNOT2-242ENST00000553020 UHRF1BP1Q6BDS2 1440 aa14.38□□□□□ -0.11
CNOT2-242ENST00000553020 ZNF335Q9H4Z2 1342 aaPredicted RBP14.38□□□□□ -0.11
CNOT2-242ENST00000553020 NUP155O75694 1391 aa14.37□□□□□ -0.11
CNOT2-242ENST00000553020 HNRNPMP52272 730 aaKnown RBP eCLIP14.37□□□□□ -0.111e-8■■■■□ 24.2
CNOT2-242ENST00000553020 EFCAB2Q5VUJ9 269 aa14.37□□□□□ -0.11
CNOT2-242ENST00000553020 POTEAQ6S8J7 498 aa14.37□□□□□ -0.11
CNOT2-242ENST00000553020 POGZQ7Z3K3 1410 aa14.37□□□□□ -0.11
CNOT2-242ENST00000553020 PLCH2O75038 1416 aa14.36□□□□□ -0.11
CNOT2-242ENST00000553020 EIF4G2P78344 907 aaKnown RBP eCLIP14.36□□□□□ -0.11
CNOT2-242ENST00000553020 ANP32CO43423 234 aa14.35□□□□□ -0.11
CNOT2-242ENST00000553020 KCNH8Q96L42 1107 aa14.35□□□□□ -0.11
CNOT2-242ENST00000553020 UPF1Q92900 1129 aaKnown RBP eCLIP14.34□□□□□ -0.11
CNOT2-242ENST00000553020 DUOX2Q9NRD8 1548 aa14.34□□□□□ -0.11
CNOT2-242ENST00000553020 FER1L4A9Z1Z3 1794 aa14.34□□□□□ -0.11
CNOT2-242ENST00000553020 ABCC1P33527 1531 aa14.33□□□□□ -0.12
CNOT2-242ENST00000553020 TOM1O60784 492 aa14.33□□□□□ -0.12
CNOT2-242ENST00000553020 PKD2Q13563 968 aa14.33□□□□□ -0.12
CNOT2-242ENST00000553020 MLECQ14165 292 aa14.33□□□□□ -0.12
CNOT2-242ENST00000553020 ERBINQ96RT1 1412 aa14.32□□□□□ -0.12
CNOT2-242ENST00000553020 CEBPAP49715 358 aaPredicted RBP14.32□□□□□ -0.12
CNOT2-242ENST00000553020 UNC13BO14795 1591 aa14.31□□□□□ -0.12
CNOT2-242ENST00000553020 DDX10Q13206 875 aaKnown RBP14.31□□□□□ -0.12
CNOT2-242ENST00000553020 FOXD1Q16676 465 aa14.31□□□□□ -0.12
CNOT2-242ENST00000553020 L3MBTL2Q969R5 705 aa14.31□□□□□ -0.12
CNOT2-242ENST00000553020 FANCAO15360 1455 aa14.31□□□□□ -0.12
CNOT2-242ENST00000553020 ARHGEF12Q9NZN5 1544 aa14.31□□□□□ -0.12
CNOT2-242ENST00000553020 ARHGEF40Q8TER5 1519 aa14.3□□□□□ -0.12
CNOT2-242ENST00000553020 FAM135AQ9P2D6 1515 aa14.29□□□□□ -0.12
CNOT2-242ENST00000553020 SENP3Q9H4L4 574 aaPredicted RBP14.28□□□□□ -0.12
CNOT2-242ENST00000553020 CFAP74Q9C0B2 1584 aa14.27□□□□□ -0.12
CNOT2-242ENST00000553020 FRMPD1Q5SYB0 1578 aa14.26□□□□□ -0.13
CNOT2-242ENST00000553020 RTEL1-TNFRSF6BF6WH68 1400 aa14.26□□□□□ -0.13
CNOT2-242ENST00000553020 HSPA5P11021 654 aaKnown RBP14.26□□□□□ -0.13
CNOT2-242ENST00000553020 ABCA9Q8IUA7 1624 aa14.26□□□□□ -0.13
CNOT2-242ENST00000553020 CCDC144AA2RUR9 1427 aa14.25□□□□□ -0.13
CNOT2-242ENST00000553020 SPAG9O60271 1321 aaKnown RBP14.25□□□□□ -0.13
CNOT2-242ENST00000553020 CCER2I3L3R5 266 aa14.25□□□□□ -0.13
CNOT2-242ENST00000553020 IQGAP3Q86VI3 1631 aa14.25□□□□□ -0.13
CNOT2-242ENST00000553020 SETD1BQ9UPS6 1966 aaKnown RBP14.24□□□□□ -0.13
CNOT2-242ENST00000553020 HIRIP3Q9BW71 556 aaPredicted RBP14.23□□□□□ -0.13
CNOT2-242ENST00000553020 KANK1Q14678 1352 aa14.22□□□□□ -0.13
CNOT2-242ENST00000553020 SIGLEC1Q9BZZ2 1709 aa14.21□□□□□ -0.13
CNOT2-242ENST00000553020 MAGI2Q86UL8 1455 aa14.21□□□□□ -0.13
CNOT2-242ENST00000553020 MYT1LQ9UL68 1186 aa14.21□□□□□ -0.13
CNOT2-242ENST00000553020 GTF3C3Q9Y5Q9 886 aa14.21□□□□□ -0.13
CNOT2-242ENST00000553020 CNTLNQ9NXG0 1405 aa14.21□□□□□ -0.13
CNOT2-242ENST00000553020 ZFYVE16Q7Z3T8 1539 aa14.2□□□□□ -0.14
CNOT2-242ENST00000553020 RALGAPBQ86X10 1494 aa14.2□□□□□ -0.14
CNOT2-242ENST00000553020 ZNF326Q5BKZ1 582 aaKnown RBP14.19□□□□□ -0.14
CNOT2-242ENST00000553020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.19□□□□□ -0.146e-8■■■■□ 21.8
CNOT2-242ENST00000553020 ATP7AQ04656 1500 aa14.19□□□□□ -0.14
CNOT2-242ENST00000553020 POLR1AO95602 1720 aaPredicted RBP14.18□□□□□ -0.14
CNOT2-242ENST00000553020 TRAPPC8Q9Y2L5 1435 aa14.17□□□□□ -0.14
CNOT2-242ENST00000553020 EIF2AK4Q9P2K8 1649 aaKnown RBP14.17□□□□□ -0.14
CNOT2-242ENST00000553020 INO80Q9ULG1 1556 aaPredicted RBP14.17□□□□□ -0.14
CNOT2-242ENST00000553020 USP47Q96K76 1375 aa14.16□□□□□ -0.14
CNOT2-242ENST00000553020 CCDC7Q96M83 1385 aa14.16□□□□□ -0.14
CNOT2-242ENST00000553020 NBPF8Q3BBV2 869 aa14.15□□□□□ -0.14
CNOT2-242ENST00000553020 NCKAP5LQ9HCH0 1330 aa14.15□□□□□ -0.15
CNOT2-242ENST00000553020 ZNF518AQ6AHZ1 1483 aa14.14□□□□□ -0.15
CNOT2-242ENST00000553020 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
CNOT2-242ENST00000553020 SCAPERQ9BY12 1400 aa14.14□□□□□ -0.15
CNOT2-242ENST00000553020 WASHC2AQ641Q2 1341 aa14.14□□□□□ -0.15
CNOT2-242ENST00000553020 NEO1Q92859 1461 aa14.13□□□□□ -0.15
CNOT2-242ENST00000553020 CARD11Q9BXL7 1154 aa14.13□□□□□ -0.15
CNOT2-242ENST00000553020 ATP10AO60312 1499 aa14.12□□□□□ -0.15
CNOT2-242ENST00000553020 KDM5CP41229 1560 aa14.12□□□□□ -0.15
CNOT2-242ENST00000553020 CAMSAP1Q5T5Y3 1602 aa14.12□□□□□ -0.15
CNOT2-242ENST00000553020 DCAF11Q8TEB1 546 aa14.11□□□□□ -0.15
CNOT2-242ENST00000553020 SPATA31E1Q6ZUB1 1445 aa14.1□□□□□ -0.15
CNOT2-242ENST00000553020 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
CNOT2-242ENST00000553020 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
CNOT2-242ENST00000553020 TET3O43151 1660 aa14.1□□□□□ -0.15
CNOT2-242ENST00000553020 ALKQ9UM73 1620 aa14.09□□□□□ -0.15
CNOT2-242ENST00000553020 RBM33Q96EV2 1170 aaKnown RBP14.09□□□□□ -0.15
CNOT2-242ENST00000553020 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
CNOT2-242ENST00000553020 TRPM2O94759 1503 aa14.09□□□□□ -0.15
CNOT2-242ENST00000553020 LAMC1P11047 1609 aa14.08□□□□□ -0.16
CNOT2-242ENST00000553020 DHX29Q7Z478 1369 aaKnown RBP14.08□□□□□ -0.16
CNOT2-242ENST00000553020 PRAG1Q86YV5 1406 aa14.07□□□□□ -0.16
CNOT2-242ENST00000553020 PRDM15P57071 1507 aaPredicted RBP14.07□□□□□ -0.16
CNOT2-242ENST00000553020 AFAP1Q8N556 730 aa14.07□□□□□ -0.16
CNOT2-242ENST00000553020 STAC3Q96MF2 364 aa14.07□□□□□ -0.16
CNOT2-242ENST00000553020 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
CNOT2-242ENST00000553020 RICTORQ6R327 1708 aa14.06□□□□□ -0.16
CNOT2-242ENST00000553020 TRPM1Q7Z4N2 1603 aa14.05□□□□□ -0.16
CNOT2-242ENST00000553020 SPHKAPQ2M3C7 1700 aa14.05□□□□□ -0.16
CNOT2-242ENST00000553020 A2MP01023 1474 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms