RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 ARHGEF12Q9NZN5 1544 aa14.34□□□□□ -0.11
TMEM116-216ENST00000552800 PLXNC1O60486 1568 aa14.34□□□□□ -0.11
TMEM116-216ENST00000552800 ANKRD50Q9ULJ7 1429 aa14.33□□□□□ -0.11
TMEM116-216ENST00000552800 KCNH8Q96L42 1107 aa14.33□□□□□ -0.12
TMEM116-216ENST00000552800 MPHOSPH9Q99550 1183 aa14.33□□□□□ -0.12
TMEM116-216ENST00000552800 ZNF777Q9ULD5 760 aaPredicted RBP14.33□□□□□ -0.12
TMEM116-216ENST00000552800 GLI2P10070 1586 aa14.31□□□□□ -0.12
TMEM116-216ENST00000552800 SPDYE4A6NLX3 237 aa14.31□□□□□ -0.12
TMEM116-216ENST00000552800 RIMBP3CA6NJZ7 1639 aa14.3□□□□□ -0.12
TMEM116-216ENST00000552800 RIMBP3BA6NNM3 1639 aa14.3□□□□□ -0.12
TMEM116-216ENST00000552800 RIMBP3Q9UFD9 1639 aa14.3□□□□□ -0.12
TMEM116-216ENST00000552800 ANKRD30BQ9BXX2 1392 aa14.3□□□□□ -0.12
TMEM116-216ENST00000552800 SYCP2Q9BX26 1530 aa14.3□□□□□ -0.12
TMEM116-216ENST00000552800 PZPP20742 1482 aa14.28□□□□□ -0.12
TMEM116-216ENST00000552800 KIF15Q9NS87 1388 aa14.28□□□□□ -0.12
TMEM116-216ENST00000552800 FANCAO15360 1455 aa14.27□□□□□ -0.12
TMEM116-216ENST00000552800 PPP1R15AO75807 674 aaPredicted RBP14.27□□□□□ -0.13
TMEM116-216ENST00000552800 DUOX2Q9NRD8 1548 aa14.26□□□□□ -0.13
TMEM116-216ENST00000552800 CFAP74Q9C0B2 1584 aa14.26□□□□□ -0.13
TMEM116-216ENST00000552800 NEO1Q92859 1461 aa14.25□□□□□ -0.13
TMEM116-216ENST00000552800 ERBINQ96RT1 1412 aa14.25□□□□□ -0.13
TMEM116-216ENST00000552800 TRAPPC8Q9Y2L5 1435 aa14.25□□□□□ -0.13
TMEM116-216ENST00000552800 MAGI2Q86UL8 1455 aa14.25□□□□□ -0.13
TMEM116-216ENST00000552800 CD109Q6YHK3 1445 aa14.24□□□□□ -0.13
TMEM116-216ENST00000552800 ZNF316A6NFI3 1004 aaPredicted RBP14.24□□□□□ -0.13
TMEM116-216ENST00000552800 SIN3AQ96ST3 1273 aa14.23□□□□□ -0.13
TMEM116-216ENST00000552800 UNC13BO14795 1591 aa14.22□□□□□ -0.13
TMEM116-216ENST00000552800 SPDYE2BA6NHP3 402 aa14.22□□□□□ -0.13
TMEM116-216ENST00000552800 C19orf67A6NJJ6 358 aa14.22□□□□□ -0.13
TMEM116-216ENST00000552800 SPDYE6P0CI01 402 aa14.22□□□□□ -0.13
TMEM116-216ENST00000552800 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
TMEM116-216ENST00000552800 RPRD2Q5VT52 1461 aaKnown RBP14.22□□□□□ -0.13
TMEM116-216ENST00000552800 MLH3Q9UHC1 1453 aa14.21□□□□□ -0.13
TMEM116-216ENST00000552800 TRIM52Q96A61 297 aa14.21□□□□□ -0.13
TMEM116-216ENST00000552800 ZNF692Q9BU19 519 aaPredicted RBP14.21□□□□□ -0.13
TMEM116-216ENST00000552800 MAP3K4Q9Y6R4 1608 aa14.21□□□□□ -0.13
TMEM116-216ENST00000552800 INO80Q9ULG1 1556 aaPredicted RBP14.21□□□□□ -0.14
TMEM116-216ENST00000552800 CYB5RLQ6IPT4 315 aa14.2□□□□□ -0.14
TMEM116-216ENST00000552800 SCAPERQ9BY12 1400 aa14.2□□□□□ -0.14
TMEM116-216ENST00000552800 ATP10AO60312 1499 aa14.19□□□□□ -0.14
TMEM116-216ENST00000552800 ADGRL1O94910 1474 aa14.19□□□□□ -0.14
TMEM116-216ENST00000552800 KDM5CP41229 1560 aa14.19□□□□□ -0.14
TMEM116-216ENST00000552800 GABBR2O75899 941 aa14.19□□□□□ -0.14
TMEM116-216ENST00000552800 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
TMEM116-216ENST00000552800 ZFYVE16Q7Z3T8 1539 aa14.19□□□□□ -0.14
TMEM116-216ENST00000552800 ZNF518AQ6AHZ1 1483 aa14.18□□□□□ -0.14
TMEM116-216ENST00000552800 SPAG9O60271 1321 aaKnown RBP14.18□□□□□ -0.14
TMEM116-216ENST00000552800 NUP155O75694 1391 aa14.18□□□□□ -0.14
TMEM116-216ENST00000552800 IQGAP3Q86VI3 1631 aa14.17□□□□□ -0.14
TMEM116-216ENST00000552800 AFAP1Q8N556 730 aa14.17□□□□□ -0.14
TMEM116-216ENST00000552800 DHX29Q7Z478 1369 aaKnown RBP14.17□□□□□ -0.14
TMEM116-216ENST00000552800 DEPDC5O75140 1603 aa14.15□□□□□ -0.14
TMEM116-216ENST00000552800 EIF2AK4Q9P2K8 1649 aaKnown RBP14.15□□□□□ -0.14
TMEM116-216ENST00000552800 VWDEQ8N2E2 1590 aa14.15□□□□□ -0.14
TMEM116-216ENST00000552800 BCORL1Q5H9F3 1711 aa14.15□□□□□ -0.14
TMEM116-216ENST00000552800 ATP7AQ04656 1500 aa14.15□□□□□ -0.14
TMEM116-216ENST00000552800 KIDINS220Q9ULH0 1771 aa14.14□□□□□ -0.15
TMEM116-216ENST00000552800 FAM135AQ9P2D6 1515 aa14.14□□□□□ -0.15
TMEM116-216ENST00000552800 POGZQ7Z3K3 1410 aa14.14□□□□□ -0.15
TMEM116-216ENST00000552800 TONSLQ96HA7 1378 aa14.13□□□□□ -0.15
TMEM116-216ENST00000552800 PKD2Q13563 968 aa14.13□□□□□ -0.15
TMEM116-216ENST00000552800 SSUH2Q9Y2M2 353 aa14.13□□□□□ -0.15
TMEM116-216ENST00000552800 NEUROD1Q13562 356 aa14.12□□□□□ -0.15
TMEM116-216ENST00000552800 DIP2BQ9P265 1576 aa14.12□□□□□ -0.15
TMEM116-216ENST00000552800 TEX14Q8IWB6 1497 aa14.1□□□□□ -0.15
TMEM116-216ENST00000552800 PLSCR2Q9NRY7 297 aa14.09□□□□□ -0.15
TMEM116-216ENST00000552800 LMTK2Q8IWU2 1503 aa14.09□□□□□ -0.15
TMEM116-216ENST00000552800 L3MBTL2Q969R5 705 aa14.08□□□□□ -0.16
TMEM116-216ENST00000552800 PTPRTO14522 1441 aa14.07□□□□□ -0.16
TMEM116-216ENST00000552800 UHRF1BP1Q6BDS2 1440 aa14.07□□□□□ -0.16
TMEM116-216ENST00000552800 RICTORQ6R327 1708 aa14.07□□□□□ -0.16
TMEM116-216ENST00000552800 PLA2R1Q13018 1463 aa14.07□□□□□ -0.16
TMEM116-216ENST00000552800 STAC3Q96MF2 364 aa14.07□□□□□ -0.16
TMEM116-216ENST00000552800 NEURL4Q96JN8 1562 aa14.07□□□□□ -0.16
TMEM116-216ENST00000552800 PRDM15P57071 1507 aaPredicted RBP14.06□□□□□ -0.16
TMEM116-216ENST00000552800 A2MP01023 1474 aa14.06□□□□□ -0.16
TMEM116-216ENST00000552800 ZMYM4Q5VZL5 1548 aa14.05□□□□□ -0.16
TMEM116-216ENST00000552800 HECW2Q9P2P5 1572 aa14.05□□□□□ -0.16
TMEM116-216ENST00000552800 RNF17Q9BXT8 1623 aaKnown RBP14.05□□□□□ -0.16
TMEM116-216ENST00000552800 PPRC1Q5VV67 1664 aaKnown RBP14.05□□□□□ -0.16
TMEM116-216ENST00000552800 DIEXFQ68CQ4 756 aaKnown RBP14.05□□□□□ -0.16
TMEM116-216ENST00000552800 PROM2Q8N271 834 aa14.04□□□□□ -0.16
TMEM116-216ENST00000552800 MROH1Q8NDA8 1641 aa14.04□□□□□ -0.16
TMEM116-216ENST00000552800 FAM69CQ0P6D2 419 aa14.03□□□□□ -0.16
TMEM116-216ENST00000552800 TET3O43151 1660 aa14.03□□□□□ -0.16
TMEM116-216ENST00000552800 REREQ9P2R6 1566 aa14.02□□□□□ -0.16
TMEM116-216ENST00000552800 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
TMEM116-216ENST00000552800 FRMPD1Q5SYB0 1578 aa14.01□□□□□ -0.17
TMEM116-216ENST00000552800 KIF13AQ9H1H9 1805 aa14.01□□□□□ -0.17
TMEM116-216ENST00000552800 KANK1Q14678 1352 aa14□□□□□ -0.17
TMEM116-216ENST00000552800 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
TMEM116-216ENST00000552800 SPATA31E1Q6ZUB1 1445 aa13.98□□□□□ -0.17
TMEM116-216ENST00000552800 E9PCH4 1651 aa13.98□□□□□ -0.17
TMEM116-216ENST00000552800 ABCA6Q8N139 1617 aa13.97□□□□□ -0.17
TMEM116-216ENST00000552800 DIP2CQ9Y2E4 1556 aa13.97□□□□□ -0.17
TMEM116-216ENST00000552800 TRPM2O94759 1503 aa13.97□□□□□ -0.17
TMEM116-216ENST00000552800 AGLP35573 1532 aa13.97□□□□□ -0.17
TMEM116-216ENST00000552800 KIF3BO15066 747 aa13.97□□□□□ -0.17
TMEM116-216ENST00000552800 CCDC144AA2RUR9 1427 aa13.97□□□□□ -0.17
TMEM116-216ENST00000552800 ARHGAP31Q2M1Z3 1444 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms