RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 ARHGEF1Q92888 912 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-213ENST00000552627 JPH4Q96JJ6 628 aa10.04□□□□□ -0.8
SMARCC2-213ENST00000552627 LAMC3Q9Y6N6 1575 aa10.04□□□□□ -0.8
SMARCC2-213ENST00000552627 ERCC6Q03468 1493 aa10.04□□□□□ -0.8
SMARCC2-213ENST00000552627 KIF21AQ7Z4S6 1674 aa10.03□□□□□ -0.8
SMARCC2-213ENST00000552627 SUPT5HO00267 1087 aaKnown RBP10.03□□□□□ -0.8
SMARCC2-213ENST00000552627 PBX2P40425 430 aa10.03□□□□□ -0.8
SMARCC2-213ENST00000552627 KRTAP3-3Q9BYR6 98 aa10.03□□□□□ -0.8
SMARCC2-213ENST00000552627 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
SMARCC2-213ENST00000552627 PTGER2P43116 358 aa10.02□□□□□ -0.81
SMARCC2-213ENST00000552627 CCDC88BA6NC98 1476 aa10.02□□□□□ -0.81
SMARCC2-213ENST00000552627 ZDHHC16Q969W1 377 aa10.01□□□□□ -0.81
SMARCC2-213ENST00000552627 PCDHGA10Q9Y5H3 936 aa10.01□□□□□ -0.81
SMARCC2-213ENST00000552627 ARHGAP33O14559 1287 aa10□□□□□ -0.81
SMARCC2-213ENST00000552627 PHF14O94880 888 aa10□□□□□ -0.81
SMARCC2-213ENST00000552627 DDX12PQ92771 950 aa10□□□□□ -0.81
SMARCC2-213ENST00000552627 AXIN2Q9Y2T1 843 aa10□□□□□ -0.81
SMARCC2-213ENST00000552627 CADPSQ9ULU8 1353 aa10□□□□□ -0.81
SMARCC2-213ENST00000552627 POTEEQ6S8J3 1075 aa9.99□□□□□ -0.81
SMARCC2-213ENST00000552627 TYW1BQ6NUM6 668 aa9.98□□□□□ -0.81
SMARCC2-213ENST00000552627 EPAS1Q99814 870 aa9.98□□□□□ -0.81
SMARCC2-213ENST00000552627 FBXW7Q969H0 707 aa9.97□□□□□ -0.81
SMARCC2-213ENST00000552627 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
SMARCC2-213ENST00000552627 BCL2L12Q9HB09 334 aa9.97□□□□□ -0.81
SMARCC2-213ENST00000552627 LSM11P83369 360 aaKnown RBP eCLIP9.96□□□□□ -0.82
SMARCC2-213ENST00000552627 ANKRD13DQ6ZTN6 518 aa9.96□□□□□ -0.82
SMARCC2-213ENST00000552627 KCNK17Q96T54 332 aa9.96□□□□□ -0.82
SMARCC2-213ENST00000552627 ADAM33Q9BZ11 813 aa9.96□□□□□ -0.82
SMARCC2-213ENST00000552627 CFTRP13569 1480 aa9.96□□□□□ -0.82
SMARCC2-213ENST00000552627 THOC2Q8NI27 1593 aaKnown RBP9.96□□□□□ -0.82
SMARCC2-213ENST00000552627 PRDM2Q13029 1718 aa9.96□□□□□ -0.82
SMARCC2-213ENST00000552627 GRXCR2A6NFK2 248 aa9.95□□□□□ -0.82
SMARCC2-213ENST00000552627 PSEN2P49810 448 aa9.95□□□□□ -0.82
SMARCC2-213ENST00000552627 PDS5BQ9NTI5 1447 aa9.94□□□□□ -0.82
SMARCC2-213ENST00000552627 PTPREP23469 700 aa9.94□□□□□ -0.82
SMARCC2-213ENST00000552627 NBR1Q14596 966 aa9.94□□□□□ -0.82
SMARCC2-213ENST00000552627 FANCD2Q9BXW9 1451 aa9.92□□□□□ -0.82
SMARCC2-213ENST00000552627 SPNS2Q8IVW8 549 aa9.92□□□□□ -0.82
SMARCC2-213ENST00000552627 RBM33Q96EV2 1170 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-213ENST00000552627 DMRTA1Q5VZB9 504 aa9.91□□□□□ -0.82
SMARCC2-213ENST00000552627 CEP164Q9UPV0 1460 aa9.91□□□□□ -0.82
SMARCC2-213ENST00000552627 PLSCR2Q9NRY7 297 aa9.9□□□□□ -0.82
SMARCC2-213ENST00000552627 EN1Q05925 392 aaPredicted RBP9.89□□□□□ -0.83
SMARCC2-213ENST00000552627 C6orf132Q5T0Z8 1188 aa9.89□□□□□ -0.83
SMARCC2-213ENST00000552627 MRC2Q9UBG0 1479 aa9.89□□□□□ -0.83
SMARCC2-213ENST00000552627 SEMA3EO15041 775 aa9.88□□□□□ -0.83
SMARCC2-213ENST00000552627 MAP3K7O43318 606 aa9.88□□□□□ -0.83
SMARCC2-213ENST00000552627 OSBPP22059 807 aa9.88□□□□□ -0.83
SMARCC2-213ENST00000552627 MLLT3P42568 568 aaPredicted RBP9.88□□□□□ -0.83
SMARCC2-213ENST00000552627 CUX2O14529 1486 aa9.87□□□□□ -0.83
SMARCC2-213ENST00000552627 TK2O00142 265 aa9.87□□□□□ -0.83
SMARCC2-213ENST00000552627 ADGRD1Q6QNK2 874 aa9.87□□□□□ -0.83
SMARCC2-213ENST00000552627 PPP1R3GB7ZBB8 358 aa9.86□□□□□ -0.83
SMARCC2-213ENST00000552627 WDR62O43379 1518 aa9.86□□□□□ -0.83
SMARCC2-213ENST00000552627 COL9A1P20849 921 aa9.85□□□□□ -0.83
SMARCC2-213ENST00000552627 PRIM1P49642 420 aaKnown RBP9.85□□□□□ -0.83
SMARCC2-213ENST00000552627 SLC4A5Q9BY07 1137 aa9.85□□□□□ -0.83
SMARCC2-213ENST00000552627 URB2Q14146 1524 aaKnown RBP9.85□□□□□ -0.83
SMARCC2-213ENST00000552627 TSR1Q2NL82 804 aaKnown RBP9.84□□□□□ -0.83
SMARCC2-213ENST00000552627 ZBED2Q9BTP6 218 aa9.84□□□□□ -0.83
SMARCC2-213ENST00000552627 VPS9D1Q9Y2B5 631 aa9.84□□□□□ -0.83
SMARCC2-213ENST00000552627 MMRN1Q13201 1228 aa9.82□□□□□ -0.84
SMARCC2-213ENST00000552627 TESPA1A2RU30 521 aaPredicted RBP9.81□□□□□ -0.84
SMARCC2-213ENST00000552627 SMYD5Q6GMV2 418 aa9.81□□□□□ -0.84
SMARCC2-213ENST00000552627 STAC3Q96MF2 364 aa9.81□□□□□ -0.84
SMARCC2-213ENST00000552627 MYT1LQ9UL68 1186 aa9.8□□□□□ -0.84
SMARCC2-213ENST00000552627 HRO43593 1189 aa9.79□□□□□ -0.84
SMARCC2-213ENST00000552627 SLC24A1O60721 1099 aa9.79□□□□□ -0.84
SMARCC2-213ENST00000552627 PROX2Q3B8N5 592 aa9.78□□□□□ -0.84
SMARCC2-213ENST00000552627 CERKQ8TCT0 537 aa9.78□□□□□ -0.84
SMARCC2-213ENST00000552627 TOPBP1Q92547 1522 aa9.77□□□□□ -0.84
SMARCC2-213ENST00000552627 DNMBPQ6XZF7 1577 aa9.77□□□□□ -0.85
SMARCC2-213ENST00000552627 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
SMARCC2-213ENST00000552627 ONECUT3O60422 494 aaPredicted RBP9.76□□□□□ -0.85
SMARCC2-213ENST00000552627 RABGEF1Q9UJ41 708 aa9.76□□□□□ -0.85
SMARCC2-213ENST00000552627 BHMG1C9JSJ3 638 aaPredicted RBP9.75□□□□□ -0.85
SMARCC2-213ENST00000552627 KIAA1468Q9P260 1216 aa9.75□□□□□ -0.85
SMARCC2-213ENST00000552627 NUTM2FA1L443 756 aa9.74□□□□□ -0.85
SMARCC2-213ENST00000552627 TRIM6-TRIM34B2RNG4 842 aa9.74□□□□□ -0.85
SMARCC2-213ENST00000552627 PRSS12P56730 875 aa9.74□□□□□ -0.85
SMARCC2-213ENST00000552627 RNF166Q96A37 237 aaPredicted RBP9.74□□□□□ -0.85
SMARCC2-213ENST00000552627 CDCA7LQ96GN5 454 aa9.74□□□□□ -0.85
SMARCC2-213ENST00000552627 NBPF3Q9H094 633 aa9.74□□□□□ -0.85
SMARCC2-213ENST00000552627 CUX1P39880 1505 aa9.73□□□□□ -0.85
SMARCC2-213ENST00000552627 RBM26Q5T8P6 1007 aaKnown RBP9.73□□□□□ -0.85
SMARCC2-213ENST00000552627 MRPL50Q8N5N7 158 aaKnown RBP9.73□□□□□ -0.85
SMARCC2-213ENST00000552627 NPDC1Q9NQX5 325 aaPredicted RBP9.73□□□□□ -0.85
SMARCC2-213ENST00000552627 ABCC8Q09428 1581 aa9.72□□□□□ -0.85
SMARCC2-213ENST00000552627 TULP1O00294 542 aaPredicted RBP9.72□□□□□ -0.85
SMARCC2-213ENST00000552627 PACS2Q86VP3 889 aa9.72□□□□□ -0.85
SMARCC2-213ENST00000552627 TSKSQ9UJT2 592 aa9.71□□□□□ -0.86
SMARCC2-213ENST00000552627 GOLGA8CPA6NN73 597 aa9.7□□□□□ -0.86
SMARCC2-213ENST00000552627 PTGDRQ13258 359 aa9.7□□□□□ -0.86
SMARCC2-213ENST00000552627 RBM27Q9P2N5 1060 aaKnown RBP9.7□□□□□ -0.86
SMARCC2-213ENST00000552627 POLA1P09884 1462 aaPredicted RBP9.7□□□□□ -0.86
SMARCC2-213ENST00000552627 TARBP1Q13395 1621 aaKnown RBP9.69□□□□□ -0.86
SMARCC2-213ENST00000552627 FGD5Q6ZNL6 1462 aa9.69□□□□□ -0.86
SMARCC2-213ENST00000552627 ZNF608Q9ULD9 1512 aaPredicted RBP9.69□□□□□ -0.86
SMARCC2-213ENST00000552627 SYNJ1O43426 1573 aa9.68□□□□□ -0.86
SMARCC2-213ENST00000552627 FCHSD2O94868 740 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms