RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 RRP7BPQ9NSQ0 103 aa16.71■□□□□ 0.27
CNOT2-239ENST00000552483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.7■□□□□ 0.263e-6■■□□□ 12.8
CNOT2-239ENST00000552483 CEP152O94986 1710 aa16.7■□□□□ 0.26
CNOT2-239ENST00000552483 ANKRD30AQ9BXX3 1397 aa16.69■□□□□ 0.26
CNOT2-239ENST00000552483 ERBINQ96RT1 1412 aa16.69■□□□□ 0.26
CNOT2-239ENST00000552483 DEPDC5O75140 1603 aa16.68■□□□□ 0.26
CNOT2-239ENST00000552483 CNTLNQ9NXG0 1405 aa16.68■□□□□ 0.26
CNOT2-239ENST00000552483 KDM5DQ9BY66 1539 aa16.67■□□□□ 0.26
CNOT2-239ENST00000552483 ITGAEP38570 1179 aa16.66■□□□□ 0.26
CNOT2-239ENST00000552483 ABCC3O15438 1527 aa16.65■□□□□ 0.26
CNOT2-239ENST00000552483 PRDM15P57071 1507 aaPredicted RBP16.65■□□□□ 0.26
CNOT2-239ENST00000552483 LMTK3Q96Q04 1460 aa16.65■□□□□ 0.26
CNOT2-239ENST00000552483 ZC3H13Q5T200 1668 aaKnown RBP16.65■□□□□ 0.26
CNOT2-239ENST00000552483 PREX1Q8TCU6 1659 aa16.65■□□□□ 0.26
CNOT2-239ENST00000552483 FAM135AQ9P2D6 1515 aa16.65■□□□□ 0.26
CNOT2-239ENST00000552483 ZMYM3Q14202 1370 aa16.64■□□□□ 0.26
CNOT2-239ENST00000552483 ESF1Q9H501 851 aaKnown RBP16.63■□□□□ 0.25
CNOT2-239ENST00000552483 ROCK1Q13464 1354 aa16.63■□□□□ 0.25
CNOT2-239ENST00000552483 CAMSAP1Q5T5Y3 1602 aa16.63■□□□□ 0.25
CNOT2-239ENST00000552483 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
CNOT2-239ENST00000552483 ANKRD50Q9ULJ7 1429 aa16.62■□□□□ 0.25
CNOT2-239ENST00000552483 VWDEQ8N2E2 1590 aa16.61■□□□□ 0.25
CNOT2-239ENST00000552483 GCC2Q8IWJ2 1684 aa16.6■□□□□ 0.25
CNOT2-239ENST00000552483 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
CNOT2-239ENST00000552483 SETD1BQ9UPS6 1966 aaKnown RBP16.6■□□□□ 0.25
CNOT2-239ENST00000552483 UNC13BO14795 1591 aa16.6■□□□□ 0.25
CNOT2-239ENST00000552483 MYO3AQ8NEV4 1616 aa16.59■□□□□ 0.25
CNOT2-239ENST00000552483 WASHC2CQ9Y4E1 1318 aa16.58■□□□□ 0.24
CNOT2-239ENST00000552483 PZPP20742 1482 aa16.58■□□□□ 0.24
CNOT2-239ENST00000552483 CFAP65Q6ZU64 1925 aaKnown RBP16.58■□□□□ 0.24
CNOT2-239ENST00000552483 NPATQ14207 1427 aa16.57■□□□□ 0.24
CNOT2-239ENST00000552483 HSPA2P54652 639 aa16.55■□□□□ 0.24
CNOT2-239ENST00000552483 FBXO31Q5XUX0 539 aaPredicted RBP16.55■□□□□ 0.24
CNOT2-239ENST00000552483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.246e-8■■■■□ 21.8
CNOT2-239ENST00000552483 ZNF142P52746 1687 aaPredicted RBP16.55■□□□□ 0.24
CNOT2-239ENST00000552483 LMTK2Q8IWU2 1503 aa16.55■□□□□ 0.24
CNOT2-239ENST00000552483 NAIPQ13075 1403 aa16.53■□□□□ 0.24
CNOT2-239ENST00000552483 UHRF1BP1Q6BDS2 1440 aa16.53■□□□□ 0.24
CNOT2-239ENST00000552483 SPATA31D1Q6ZQQ2 1576 aa16.53■□□□□ 0.24
CNOT2-239ENST00000552483 ERVK-7P63135 1459 aa16.52■□□□□ 0.23
CNOT2-239ENST00000552483 IQGAP3Q86VI3 1631 aa16.52■□□□□ 0.23
CNOT2-239ENST00000552483 EFCAB6Q5THR3 1501 aa16.51■□□□□ 0.23
CNOT2-239ENST00000552483 TET3O43151 1660 aa16.51■□□□□ 0.23
CNOT2-239ENST00000552483 CEP170BQ9Y4F5 1589 aaPredicted RBP16.51■□□□□ 0.23
CNOT2-239ENST00000552483 KANK1Q14678 1352 aa16.5■□□□□ 0.23
CNOT2-239ENST00000552483 TNRQ92752 1358 aa16.5■□□□□ 0.23
CNOT2-239ENST00000552483 STRCQ7RTU9 1775 aa16.49■□□□□ 0.23
CNOT2-239ENST00000552483 HFM1A2PYH4 1435 aa16.49■□□□□ 0.23
CNOT2-239ENST00000552483 ARHGAP31Q2M1Z3 1444 aa16.49■□□□□ 0.23
CNOT2-239ENST00000552483 E9PCH4 1651 aa16.48■□□□□ 0.23
CNOT2-239ENST00000552483 SYNMO15061 1565 aa16.47■□□□□ 0.23
CNOT2-239ENST00000552483 A2ML1A8K2U0 1454 aa16.46■□□□□ 0.23
CNOT2-239ENST00000552483 NUP155O75694 1391 aa16.42■□□□□ 0.22
CNOT2-239ENST00000552483 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
CNOT2-239ENST00000552483 NOS1P29475 1434 aa16.42■□□□□ 0.22
CNOT2-239ENST00000552483 UBR1Q8IWV7 1749 aa16.42■□□□□ 0.22
CNOT2-239ENST00000552483 NLRP1Q9C000 1473 aa16.42■□□□□ 0.22
CNOT2-239ENST00000552483 PIK3C2BO00750 1634 aa16.41■□□□□ 0.22
CNOT2-239ENST00000552483 UGGT1Q9NYU2 1555 aa16.39■□□□□ 0.21
CNOT2-239ENST00000552483 RPRD2Q5VT52 1461 aaKnown RBP16.39■□□□□ 0.21
CNOT2-239ENST00000552483 MYO5BQ9ULV0 1848 aa16.38■□□□□ 0.21
CNOT2-239ENST00000552483 PLA2R1Q13018 1463 aa16.37■□□□□ 0.21
CNOT2-239ENST00000552483 POLR1AO95602 1720 aaPredicted RBP16.37■□□□□ 0.21
CNOT2-239ENST00000552483 SPHKAPQ2M3C7 1700 aa16.36■□□□□ 0.21
CNOT2-239ENST00000552483 NEURL4Q96JN8 1562 aa16.36■□□□□ 0.21
CNOT2-239ENST00000552483 NCKAP5LQ9HCH0 1330 aa16.34■□□□□ 0.21
CNOT2-239ENST00000552483 SETD5Q9C0A6 1442 aa16.34■□□□□ 0.21
CNOT2-239ENST00000552483 ADGRB3O60242 1522 aa16.33■□□□□ 0.2
CNOT2-239ENST00000552483 KDM5AP29375 1690 aaKnown RBP16.33■□□□□ 0.2
CNOT2-239ENST00000552483 IDI1Q13907 227 aa16.32■□□□□ 0.2
CNOT2-239ENST00000552483 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
CNOT2-239ENST00000552483 RAB3GAP2Q9H2M9 1393 aa16.31■□□□□ 0.2
CNOT2-239ENST00000552483 TMEM131LA2VDJ0 1609 aa16.3■□□□□ 0.2
CNOT2-239ENST00000552483 CLTCL1P53675 1640 aa16.3■□□□□ 0.2
CNOT2-239ENST00000552483 SLIT1O75093 1534 aa16.29■□□□□ 0.2
CNOT2-239ENST00000552483 ARHGAP23Q9P227 1491 aa16.29■□□□□ 0.2
CNOT2-239ENST00000552483 PTPRTO14522 1441 aa16.29■□□□□ 0.2
CNOT2-239ENST00000552483 TRPM2O94759 1503 aa16.28■□□□□ 0.2
CNOT2-239ENST00000552483 PKD2Q13563 968 aa16.27■□□□□ 0.2
CNOT2-239ENST00000552483 THEMISQ8N1K5 641 aaPredicted RBP16.27■□□□□ 0.2
CNOT2-239ENST00000552483 IQGAP1P46940 1657 aa16.26■□□□□ 0.19
CNOT2-239ENST00000552483 FOXD1Q16676 465 aa16.25■□□□□ 0.19
CNOT2-239ENST00000552483 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
CNOT2-239ENST00000552483 SLC52A1Q9NWF4 448 aa16.25■□□□□ 0.19
CNOT2-239ENST00000552483 MED14O60244 1454 aa16.24■□□□□ 0.19
CNOT2-239ENST00000552483 TMEM2Q9UHN6 1383 aa16.24■□□□□ 0.19
CNOT2-239ENST00000552483 SCAF11Q99590 1463 aaKnown RBP16.23■□□□□ 0.19
CNOT2-239ENST00000552483 LTKP29376 864 aa16.23■□□□□ 0.19
CNOT2-239ENST00000552483 NPHP4O75161 1426 aaPredicted RBP16.22■□□□□ 0.19
CNOT2-239ENST00000552483 MPHOSPH9Q99550 1183 aa16.22■□□□□ 0.19
CNOT2-239ENST00000552483 KIF1BO60333 1816 aa16.22■□□□□ 0.19
CNOT2-239ENST00000552483 ZFYVE9O95405 1425 aa16.21■□□□□ 0.19
CNOT2-239ENST00000552483 LTBP4Q8N2S1 1624 aa16.21■□□□□ 0.19
CNOT2-239ENST00000552483 ANKLE2Q86XL3 938 aa16.21■□□□□ 0.19
CNOT2-239ENST00000552483 STAG3Q9UJ98 1225 aa16.21■□□□□ 0.19
CNOT2-239ENST00000552483 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
CNOT2-239ENST00000552483 STRCP1A6NGW2 1772 aa16.19■□□□□ 0.18
CNOT2-239ENST00000552483 RIMS2Q9UQ26 1411 aa16.19■□□□□ 0.18
CNOT2-239ENST00000552483 CHGAP10645 457 aaKnown RBP16.18■□□□□ 0.18
CNOT2-239ENST00000552483 TXNDC2Q86VQ3 553 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms