RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 STRCQ7RTU9 1775 aa21.85■■□□□ 1.09
DDX54-210ENST00000552375 ABCC5O15440 1437 aa21.85■■□□□ 1.09
DDX54-210ENST00000552375 ZNF142P52746 1687 aaPredicted RBP21.85■■□□□ 1.09
DDX54-210ENST00000552375 RNF17Q9BXT8 1623 aaKnown RBP21.84■■□□□ 1.09
DDX54-210ENST00000552375 PZPP20742 1482 aa21.84■■□□□ 1.09
DDX54-210ENST00000552375 DMRT2Q9Y5R5 561 aa21.84■■□□□ 1.09
DDX54-210ENST00000552375 EIF2AK4Q9P2K8 1649 aaKnown RBP21.84■■□□□ 1.09
DDX54-210ENST00000552375 CEP170BQ9Y4F5 1589 aaPredicted RBP21.83■■□□□ 1.09
DDX54-210ENST00000552375 CROCC2H7BZ55 1655 aa21.82■■□□□ 1.08
DDX54-210ENST00000552375 DAPK1P53355 1430 aa21.82■■□□□ 1.08
DDX54-210ENST00000552375 DUOX2Q9NRD8 1548 aa21.82■■□□□ 1.08
DDX54-210ENST00000552375 FBXO41Q8TF61 875 aa21.82■■□□□ 1.08
DDX54-210ENST00000552375 PTPRTO14522 1441 aa21.81■■□□□ 1.08
DDX54-210ENST00000552375 KIF15Q9NS87 1388 aa21.81■■□□□ 1.08
DDX54-210ENST00000552375 WASHC2CQ9Y4E1 1318 aa21.8■■□□□ 1.08
DDX54-210ENST00000552375 DNMT1P26358 1616 aaKnown RBP21.8■■□□□ 1.08
DDX54-210ENST00000552375 CAMSAP1Q5T5Y3 1602 aa21.8■■□□□ 1.08
DDX54-210ENST00000552375 PLA2R1Q13018 1463 aa21.79■■□□□ 1.08
DDX54-210ENST00000552375 ABCC3O15438 1527 aa21.79■■□□□ 1.08
DDX54-210ENST00000552375 TNRQ92752 1358 aa21.78■■□□□ 1.08
DDX54-210ENST00000552375 MROH1Q8NDA8 1641 aa21.78■■□□□ 1.08
DDX54-210ENST00000552375 ERBINQ96RT1 1412 aa21.78■■□□□ 1.08
DDX54-210ENST00000552375 A2ML1A8K2U0 1454 aa21.77■■□□□ 1.08
DDX54-210ENST00000552375 ZC3H13Q5T200 1668 aaKnown RBP21.76■■□□□ 1.07
DDX54-210ENST00000552375 PRDM15P57071 1507 aaPredicted RBP21.74■■□□□ 1.07
DDX54-210ENST00000552375 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
DDX54-210ENST00000552375 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
DDX54-210ENST00000552375 CERKQ8TCT0 537 aa21.73■■□□□ 1.07
DDX54-210ENST00000552375 ANKRD30AQ9BXX3 1397 aa21.71■■□□□ 1.07
DDX54-210ENST00000552375 RRP7BPQ9NSQ0 103 aa21.7■■□□□ 1.06
DDX54-210ENST00000552375 NLRP1Q9C000 1473 aa21.7■■□□□ 1.06
DDX54-210ENST00000552375 PKD2Q13563 968 aa21.69■■□□□ 1.06
DDX54-210ENST00000552375 ADGRL2O95490 1459 aa21.69■■□□□ 1.06
DDX54-210ENST00000552375 SPATA31D1Q6ZQQ2 1576 aa21.69■■□□□ 1.06
DDX54-210ENST00000552375 ERVK-7P63135 1459 aa21.68■■□□□ 1.06
DDX54-210ENST00000552375 NCKAP5LQ9HCH0 1330 aa21.67■■□□□ 1.06
DDX54-210ENST00000552375 DEPDC5O75140 1603 aa21.66■■□□□ 1.06
DDX54-210ENST00000552375 LTBP4Q8N2S1 1624 aa21.65■■□□□ 1.06
DDX54-210ENST00000552375 FAM50AQ14320 339 aaKnown RBP21.64■■□□□ 1.05
DDX54-210ENST00000552375 CHIC2Q9UKJ5 165 aa21.64■■□□□ 1.05
DDX54-210ENST00000552375 ARHGAP31Q2M1Z3 1444 aa21.63■■□□□ 1.05
DDX54-210ENST00000552375 CEP152O94986 1710 aa21.63■■□□□ 1.05
DDX54-210ENST00000552375 UGGT1Q9NYU2 1555 aa21.62■■□□□ 1.05
DDX54-210ENST00000552375 KANK1Q14678 1352 aa21.6■■□□□ 1.05
DDX54-210ENST00000552375 LMTK2Q8IWU2 1503 aa21.6■■□□□ 1.05
DDX54-210ENST00000552375 VWDEQ8N2E2 1590 aa21.59■■□□□ 1.05
DDX54-210ENST00000552375 NEURL4Q96JN8 1562 aa21.59■■□□□ 1.05
DDX54-210ENST00000552375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.58■■□□□ 1.04
DDX54-210ENST00000552375 IQSEC2Q5JU85 1478 aa21.58■■□□□ 1.04
DDX54-210ENST00000552375 ZNF335Q9H4Z2 1342 aaPredicted RBP21.56■■□□□ 1.04
DDX54-210ENST00000552375 ANKRD50Q9ULJ7 1429 aa21.56■■□□□ 1.04
DDX54-210ENST00000552375 POLR1AO95602 1720 aaPredicted RBP21.56■■□□□ 1.04
DDX54-210ENST00000552375 THEMISQ8N1K5 641 aaPredicted RBP21.56■■□□□ 1.04
DDX54-210ENST00000552375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.56■■□□□ 1.04
DDX54-210ENST00000552375 EFCAB6Q5THR3 1501 aa21.53■■□□□ 1.04
DDX54-210ENST00000552375 MED14O60244 1454 aa21.52■■□□□ 1.04
DDX54-210ENST00000552375 ANKLE2Q86XL3 938 aa21.52■■□□□ 1.04
DDX54-210ENST00000552375 ROCK1Q13464 1354 aa21.51■■□□□ 1.03
DDX54-210ENST00000552375 NPHP4O75161 1426 aaPredicted RBP21.5■■□□□ 1.03
DDX54-210ENST00000552375 UBR1Q8IWV7 1749 aa21.47■■□□□ 1.03
DDX54-210ENST00000552375 NOS1P29475 1434 aa21.46■■□□□ 1.03
DDX54-210ENST00000552375 ARHGAP23Q9P227 1491 aa21.45■■□□□ 1.03
DDX54-210ENST00000552375 SLIT1O75093 1534 aa21.45■■□□□ 1.02
DDX54-210ENST00000552375 UNC13BO14795 1591 aa21.45■■□□□ 1.02
DDX54-210ENST00000552375 RPRD2Q5VT52 1461 aaKnown RBP21.45■■□□□ 1.02
DDX54-210ENST00000552375 SCAF11Q99590 1463 aaKnown RBP21.45■■□□□ 1.02
DDX54-210ENST00000552375 SYNMO15061 1565 aa21.44■■□□□ 1.02
DDX54-210ENST00000552375 CPS1P31327 1500 aa21.44■■□□□ 1.02
DDX54-210ENST00000552375 IQGAP1P46940 1657 aa21.44■■□□□ 1.02
DDX54-210ENST00000552375 PIK3C2BO00750 1634 aa21.42■■□□□ 1.02
DDX54-210ENST00000552375 RRBP1Q9P2E9 1410 aaKnown RBP21.41■■□□□ 1.02
DDX54-210ENST00000552375 TET3O43151 1660 aa21.4■■□□□ 1.02
DDX54-210ENST00000552375 CFAP65Q6ZU64 1925 aaKnown RBP21.4■■□□□ 1.02
DDX54-210ENST00000552375 ITGAEP38570 1179 aa21.4■■□□□ 1.02
DDX54-210ENST00000552375 TMEM2Q9UHN6 1383 aa21.39■■□□□ 1.02
DDX54-210ENST00000552375 ADGRB3O60242 1522 aa21.39■■□□□ 1.01
DDX54-210ENST00000552375 KDM5AP29375 1690 aaKnown RBP21.38■■□□□ 1.01
DDX54-210ENST00000552375 IDI1Q13907 227 aa21.37■■□□□ 1.01
DDX54-210ENST00000552375 LTKP29376 864 aa21.35■■□□□ 1.01
DDX54-210ENST00000552375 SLC52A1Q9NWF4 448 aa21.35■■□□□ 1.01
DDX54-210ENST00000552375 STAG3Q9UJ98 1225 aa21.35■■□□□ 1.01
DDX54-210ENST00000552375 IQGAP3Q86VI3 1631 aa21.35■■□□□ 1.01
DDX54-210ENST00000552375 TXNDC2Q86VQ3 553 aa21.34■■□□□ 1.01
DDX54-210ENST00000552375 EID1Q9Y6B2 187 aa21.34■■□□□ 1.01
DDX54-210ENST00000552375 GCC2Q8IWJ2 1684 aa21.34■■□□□ 1.01
DDX54-210ENST00000552375 UBAP1LF5GYI3 381 aa21.33■■□□□ 1.01
DDX54-210ENST00000552375 NUP155O75694 1391 aa21.3■■□□□ 1
DDX54-210ENST00000552375 E9PCH4 1651 aa21.28■■□□□ 1
DDX54-210ENST00000552375 LRRC7Q96NW7 1537 aa21.27■■□□□ 1
DDX54-210ENST00000552375 ZFYVE9O95405 1425 aa21.25■□□□□ 0.99
DDX54-210ENST00000552375 STRCP1A6NGW2 1772 aa21.25■□□□□ 0.99
DDX54-210ENST00000552375 NAIPQ13075 1403 aa21.24■□□□□ 0.99
DDX54-210ENST00000552375 TMEM131LA2VDJ0 1609 aa21.22■□□□□ 0.99
DDX54-210ENST00000552375 TOM1O60784 492 aa21.21■□□□□ 0.99
DDX54-210ENST00000552375 HFM1A2PYH4 1435 aa21.21■□□□□ 0.99
DDX54-210ENST00000552375 RIMS2Q9UQ26 1411 aa21.21■□□□□ 0.99
DDX54-210ENST00000552375 ALKQ9UM73 1620 aa21.2■□□□□ 0.98
DDX54-210ENST00000552375 PLEKHG1Q9ULL1 1385 aa21.19■□□□□ 0.98
DDX54-210ENST00000552375 NWD1Q149M9 1564 aa21.16■□□□□ 0.98
DDX54-210ENST00000552375 SCAF1Q9H7N4 1312 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms