RNA–Protein interactions for RNA: ENST00000552351.5

CHPT1-210, Transcript of choline phosphotransferase 1, human

TSL 2

Gene CHPT1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHPT1-210	ENST00000552351	FAM135A	Q9P2D6	1515 aa		41.04	■■■■■ 4.16
CHPT1-210	ENST00000552351	ESF1	Q9H501	851 aa	Known RBP	41.03	■■■■■ 4.16
CHPT1-210	ENST00000552351	GGT6	Q6P531	493 aa		41.02	■■■■■ 4.16
CHPT1-210	ENST00000552351	MROH2A	A6NES4	1674 aa		40.99	■■■■■ 4.15
CHPT1-210	ENST00000552351	ITGAE	P38570	1179 aa		40.98	■■■■■ 4.15
CHPT1-210	ENST00000552351	CLTC	Q00610	1675 aa	Known RBP	40.93	■■■■■ 4.14
CHPT1-210	ENST00000552351	ANKRD50	Q9ULJ7	1429 aa		40.92	■■■■■ 4.14
CHPT1-210	ENST00000552351	DEPDC5	O75140	1603 aa		40.91	■■■■■ 4.14
CHPT1-210	ENST00000552351	KDM5D	Q9BY66	1539 aa		40.91	■■■■■ 4.14
CHPT1-210	ENST00000552351	MROH1	Q8NDA8	1641 aa		40.89	■■■■■ 4.14
CHPT1-210	ENST00000552351	C3	P01024	1663 aa		40.88	■■■■■ 4.14
CHPT1-210	ENST00000552351	PRDM15	P57071	1507 aa	Predicted RBP	40.88	■■■■■ 4.13
CHPT1-210	ENST00000552351	ZC3H13	Q5T200	1668 aa	Known RBP	40.88	■■■■■ 4.13
CHPT1-210	ENST00000552351	ZMYM3	Q14202	1370 aa		40.83	■■■■■ 4.13
CHPT1-210	ENST00000552351	WASHC2C	Q9Y4E1	1318 aa		40.82	■■■■■ 4.13
CHPT1-210	ENST00000552351	ABCC3	O15438	1527 aa		40.77	■■■■■ 4.12
CHPT1-210	ENST00000552351	GCC2	Q8IWJ2	1684 aa		40.76	■■■■■ 4.11
CHPT1-210	ENST00000552351	CEBPA	P49715	358 aa	Predicted RBP	40.75	■■■■■ 4.11
CHPT1-210	ENST00000552351	KANK1	Q14678	1352 aa		40.74	■■■■■ 4.11
CHPT1-210	ENST00000552351	SETD1B	Q9UPS6	1966 aa	Known RBP	40.73	■■■■■ 4.11
CHPT1-210	ENST00000552351	VWDE	Q8N2E2	1590 aa		40.72	■■■■■ 4.11
CHPT1-210	ENST00000552351	HFM1	A2PYH4	1435 aa		40.72	■■■■■ 4.11
CHPT1-210	ENST00000552351	NPAT	Q14207	1427 aa		40.72	■■■■■ 4.11
CHPT1-210	ENST00000552351	CEP152	O94986	1710 aa		40.71	■■■■■ 4.11
CHPT1-210	ENST00000552351	UNC13B	O14795	1591 aa		40.71	■■■■■ 4.11
CHPT1-210	ENST00000552351	NAIP	Q13075	1403 aa		40.71	■■■■■ 4.11
CHPT1-210	ENST00000552351	PLPPR3	Q6T4P5	718 aa		40.7	■■■■■ 4.11
CHPT1-210	ENST00000552351	PZP	P20742	1482 aa		40.67	■■■■■ 4.1
CHPT1-210	ENST00000552351	CAMSAP1	Q5T5Y3	1602 aa		40.67	■■■■■ 4.1
CHPT1-210	ENST00000552351	LMTK2	Q8IWU2	1503 aa		40.66	■■■■■ 4.1
CHPT1-210	ENST00000552351	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	40.66	■■■■■ 4.1
CHPT1-210	ENST00000552351	PREX1	Q8TCU6	1659 aa		40.65	■■■■■ 4.1
CHPT1-210	ENST00000552351	ARHGAP31	Q2M1Z3	1444 aa		40.6	■■■■■ 4.09
CHPT1-210	ENST00000552351	LMTK3	Q96Q04	1460 aa		40.55	■■■■■ 4.08
CHPT1-210	ENST00000552351	IQGAP3	Q86VI3	1631 aa		40.55	■■■■■ 4.08
CHPT1-210	ENST00000552351	UHRF1BP1	Q6BDS2	1440 aa		40.52	■■■■■ 4.08
CHPT1-210	ENST00000552351	EFCAB6	Q5THR3	1501 aa		40.51	■■■■■ 4.08
CHPT1-210	ENST00000552351	TET3	O43151	1660 aa		40.51	■■■■■ 4.08
CHPT1-210	ENST00000552351	SPATA31D1	Q6ZQQ2	1576 aa		40.49	■■■■■ 4.07
CHPT1-210	ENST00000552351	NUP155	O75694	1391 aa		40.48	■■■■■ 4.07
CHPT1-210	ENST00000552351	MYO3A	Q8NEV4	1616 aa		40.46	■■■■■ 4.07
CHPT1-210	ENST00000552351	FBXO31	Q5XUX0	539 aa	Predicted RBP	40.46	■■■■■ 4.07
CHPT1-210	ENST00000552351	ERVK-7	P63135	1459 aa		40.45	■■■■■ 4.07
CHPT1-210	ENST00000552351	RPRD2	Q5VT52	1461 aa	Known RBP	40.45	■■■■■ 4.07
CHPT1-210	ENST00000552351	TNR	Q92752	1358 aa		40.45	■■■■■ 4.07
CHPT1-210	ENST00000552351	ZNF142	P52746	1687 aa	Predicted RBP	40.41	■■■■■ 4.06
CHPT1-210	ENST00000552351	ACIN1	Q9UKV3	1341 aa	Known RBP	40.4	■■■■■ 4.06
CHPT1-210	ENST00000552351	CFAP65	Q6ZU64	1925 aa	Known RBP	40.4	■■■■■ 4.06
CHPT1-210	ENST00000552351	SETD5	Q9C0A6	1442 aa		40.38	■■■■■ 4.05
CHPT1-210	ENST00000552351	NLRP1	Q9C000	1473 aa		40.36	■■■■■ 4.05
CHPT1-210	ENST00000552351	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	40.36	■■■■■ 4.05
CHPT1-210	ENST00000552351		E9PCH4	1651 aa		40.33	■■■■■ 4.05
CHPT1-210	ENST00000552351	A2ML1	A8K2U0	1454 aa		40.32	■■■■■ 4.05
CHPT1-210	ENST00000552351	NOS1	P29475	1434 aa		40.3	■■■■■ 4.04
CHPT1-210	ENST00000552351	TRIM52	Q96A61	297 aa		40.26	■■■■■ 4.03
CHPT1-210	ENST00000552351	HSPA2	P54652	639 aa		40.24	■■■■■ 4.03
CHPT1-210	ENST00000552351	SYNM	O15061	1565 aa		40.22	■■■■■ 4.03
CHPT1-210	ENST00000552351	RAB3GAP2	Q9H2M9	1393 aa		40.21	■■■■■ 4.03
CHPT1-210	ENST00000552351	UGGT1	Q9NYU2	1555 aa		40.18	■■■■■ 4.02
CHPT1-210	ENST00000552351	HRC	P23327	699 aa		40.17	■■■■■ 4.02
CHPT1-210	ENST00000552351	SLC52A1	Q9NWF4	448 aa		40.16	■■■■■ 4.02
CHPT1-210	ENST00000552351	PLA2R1	Q13018	1463 aa		40.15	■■■■■ 4.02
CHPT1-210	ENST00000552351	KDM5A	P29375	1690 aa	Known RBP	40.14	■■■■■ 4.02
CHPT1-210	ENST00000552351	SLC4A1AP	Q9BWU0	796 aa	Known RBP	40.14	■■■■■ 4.02
CHPT1-210	ENST00000552351	SPHKAP	Q2M3C7	1700 aa		40.12	■■■■■ 4.01
CHPT1-210	ENST00000552351	UBR1	Q8IWV7	1749 aa		40.12	■■■■■ 4.01
CHPT1-210	ENST00000552351	TRIM26	Q12899	539 aa	Predicted RBP	40.11	■■■■■ 4.01
CHPT1-210	ENST00000552351	THEMIS	Q8N1K5	641 aa	Predicted RBP	40.11	■■■■■ 4.01
CHPT1-210	ENST00000552351	PIK3C2B	O00750	1634 aa		40.1	■■■■■ 4.01
CHPT1-210	ENST00000552351	PTPRT	O14522	1441 aa		40.09	■■■■■ 4.01
CHPT1-210	ENST00000552351	STRC	Q7RTU9	1775 aa		40.08	■■■■■ 4.01
CHPT1-210	ENST00000552351	PKD2	Q13563	968 aa		40.06	■■■■■ 4
CHPT1-210	ENST00000552351	IDI1	Q13907	227 aa		40.06	■■■■■ 4
CHPT1-210	ENST00000552351	MPHOSPH9	Q99550	1183 aa		40.03	■■■■■ 4
CHPT1-210	ENST00000552351	TRPM2	O94759	1503 aa		40.01	■■■■■ 4
CHPT1-210	ENST00000552351	ADGRB3	O60242	1522 aa		40	■■■■□ 3.99
CHPT1-210	ENST00000552351	STAG3	Q9UJ98	1225 aa		39.96	■■■■□ 3.99
CHPT1-210	ENST00000552351	DMRT2	Q9Y5R5	561 aa		39.96	■■■■□ 3.99
CHPT1-210	ENST00000552351	POLR1A	O95602	1720 aa	Predicted RBP	39.96	■■■■□ 3.99
CHPT1-210	ENST00000552351	SLIT1	O75093	1534 aa		39.94	■■■■□ 3.98
CHPT1-210	ENST00000552351	TMEM131L	A2VDJ0	1609 aa		39.92	■■■■□ 3.98
CHPT1-210	ENST00000552351	ARHGAP23	Q9P227	1491 aa		39.92	■■■■□ 3.98
CHPT1-210	ENST00000552351	ANKLE2	Q86XL3	938 aa		39.9	■■■■□ 3.98
CHPT1-210	ENST00000552351	TMEM2	Q9UHN6	1383 aa		39.87	■■■■□ 3.97
CHPT1-210	ENST00000552351	MYO5B	Q9ULV0	1848 aa		39.86	■■■■□ 3.97
CHPT1-210	ENST00000552351	CLTCL1	P53675	1640 aa		39.86	■■■■□ 3.97
CHPT1-210	ENST00000552351	NCKAP5L	Q9HCH0	1330 aa		39.86	■■■■□ 3.97
CHPT1-210	ENST00000552351	NEURL4	Q96JN8	1562 aa		39.83	■■■■□ 3.97
CHPT1-210	ENST00000552351	MED14	O60244	1454 aa		39.83	■■■■□ 3.97
CHPT1-210	ENST00000552351	FOXD1	Q16676	465 aa		39.81	■■■■□ 3.96
CHPT1-210	ENST00000552351	KIF1B	O60333	1816 aa		39.81	■■■■□ 3.96
CHPT1-210	ENST00000552351	SCAF11	Q99590	1463 aa	Known RBP	39.81	■■■■□ 3.96
CHPT1-210	ENST00000552351	EID1	Q9Y6B2	187 aa		39.78	■■■■□ 3.96
CHPT1-210	ENST00000552351	CHGA	P10645	457 aa	Known RBP	39.75	■■■■□ 3.95
CHPT1-210	ENST00000552351	CCDC144A	A2RUR9	1427 aa		39.75	■■■■□ 3.95
CHPT1-210	ENST00000552351	TXNDC2	Q86VQ3	553 aa		39.74	■■■■□ 3.95
CHPT1-210	ENST00000552351	IQGAP1	P46940	1657 aa		39.73	■■■■□ 3.95
CHPT1-210	ENST00000552351	HDGF	P51858	240 aa	Known RBP	39.73	■■■■□ 3.95
CHPT1-210	ENST00000552351	ZFYVE9	O95405	1425 aa		39.73	■■■■□ 3.95
CHPT1-210	ENST00000552351	NPHP4	O75161	1426 aa	Predicted RBP	39.72	■■■■□ 3.95

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms