RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 SMYD5Q6GMV2 418 aa14.8□□□□□ -0.04
CHPT1-209ENST00000552329 BCL2L12Q9HB09 334 aa14.8□□□□□ -0.04
CHPT1-209ENST00000552329 C6orf132Q5T0Z8 1188 aa14.79□□□□□ -0.04
CHPT1-209ENST00000552329 CDHR5Q9HBB8 845 aa14.79□□□□□ -0.04
CHPT1-209ENST00000552329 NUTM2FA1L443 756 aa14.78□□□□□ -0.04
CHPT1-209ENST00000552329 PTPREP23469 700 aa14.78□□□□□ -0.04
CHPT1-209ENST00000552329 ARHGAP33O14559 1287 aa14.76□□□□□ -0.05
CHPT1-209ENST00000552329 COL9A1P20849 921 aa14.76□□□□□ -0.05
CHPT1-209ENST00000552329 DMRTA1Q5VZB9 504 aa14.76□□□□□ -0.05
CHPT1-209ENST00000552329 TULP1O00294 542 aaPredicted RBP14.74□□□□□ -0.05
CHPT1-209ENST00000552329 KCNH8Q96L42 1107 aa14.74□□□□□ -0.05
CHPT1-209ENST00000552329 KRTAP3-3Q9BYR6 98 aa14.74□□□□□ -0.05
CHPT1-209ENST00000552329 KRTAP3-2Q9BYR7 98 aa14.74□□□□□ -0.05
CHPT1-209ENST00000552329 ANKRD13DQ6ZTN6 518 aa14.73□□□□□ -0.05
CHPT1-209ENST00000552329 PBX2P40425 430 aa14.71□□□□□ -0.05
CHPT1-209ENST00000552329 LMOD2Q6P5Q4 547 aa14.7□□□□□ -0.06
CHPT1-209ENST00000552329 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.7□□□□□ -0.06
CHPT1-209ENST00000552329 LSM11P83369 360 aaKnown RBP eCLIP14.69□□□□□ -0.06
CHPT1-209ENST00000552329 PROX2Q3B8N5 592 aa14.67□□□□□ -0.06
CHPT1-209ENST00000552329 PPP1R3GB7ZBB8 358 aa14.66□□□□□ -0.06
CHPT1-209ENST00000552329 GPIHBP1Q8IV16 184 aa14.65□□□□□ -0.06
CHPT1-209ENST00000552329 NPDC1Q9NQX5 325 aaPredicted RBP14.64□□□□□ -0.07
CHPT1-209ENST00000552329 ZBED2Q9BTP6 218 aa14.62□□□□□ -0.07
CHPT1-209ENST00000552329 PTGDRQ13258 359 aa14.61□□□□□ -0.07
CHPT1-209ENST00000552329 ADGRD1Q6QNK2 874 aa14.59□□□□□ -0.07
CHPT1-209ENST00000552329 VPS9D1Q9Y2B5 631 aa14.59□□□□□ -0.07
CHPT1-209ENST00000552329 FCHSD2O94868 740 aa14.58□□□□□ -0.08
CHPT1-209ENST00000552329 CDCA7LQ96GN5 454 aa14.58□□□□□ -0.08
CHPT1-209ENST00000552329 FECHP22830 423 aa14.56□□□□□ -0.08
CHPT1-209ENST00000552329 PRSS12P56730 875 aa14.56□□□□□ -0.08
CHPT1-209ENST00000552329 PADI6Q6TGC4 694 aa14.56□□□□□ -0.08
CHPT1-209ENST00000552329 TSKSQ9UJT2 592 aa14.56□□□□□ -0.08
CHPT1-209ENST00000552329 GPR37O15354 613 aa14.55□□□□□ -0.08
CHPT1-209ENST00000552329 PCDH10Q9P2E7 1040 aa14.55□□□□□ -0.08
CHPT1-209ENST00000552329 FAM198AQ9UFP1 575 aa14.55□□□□□ -0.08
CHPT1-209ENST00000552329 CERKQ8TCT0 537 aa14.54□□□□□ -0.08
CHPT1-209ENST00000552329 KIAA1468Q9P260 1216 aa14.54□□□□□ -0.08
CHPT1-209ENST00000552329 TRIM6-TRIM34B2RNG4 842 aa14.53□□□□□ -0.08
CHPT1-209ENST00000552329 FAM161AQ3B820 660 aa14.53□□□□□ -0.08
CHPT1-209ENST00000552329 C3orf80F5H4A9 247 aa14.51□□□□□ -0.09
CHPT1-209ENST00000552329 TK2O00142 265 aa14.5□□□□□ -0.09
CHPT1-209ENST00000552329 SMAPO00193 183 aa14.5□□□□□ -0.09
CHPT1-209ENST00000552329 ZC3H15Q8WU90 426 aaKnown RBP14.5□□□□□ -0.09
CHPT1-209ENST00000552329 SEPT9Q9UHD8 586 aaPredicted RBP14.5□□□□□ -0.09
CHPT1-209ENST00000552329 HIC1Q14526 733 aa14.49□□□□□ -0.09
CHPT1-209ENST00000552329 GNPATO15228 680 aa14.48□□□□□ -0.09
CHPT1-209ENST00000552329 STAC3Q96MF2 364 aa14.48□□□□□ -0.09
CHPT1-209ENST00000552329 SLC4A5Q9BY07 1137 aa14.48□□□□□ -0.09
CHPT1-209ENST00000552329 PACS2Q86VP3 889 aa14.47□□□□□ -0.09
CHPT1-209ENST00000552329 RABGEF1Q9UJ41 708 aa14.46□□□□□ -0.09
CHPT1-209ENST00000552329 HRO43593 1189 aa14.45□□□□□ -0.1
CHPT1-209ENST00000552329 PNMA3Q9UL41 463 aa14.45□□□□□ -0.1
CHPT1-209ENST00000552329 NUDT18Q6ZVK8 323 aa14.44□□□□□ -0.1
CHPT1-209ENST00000552329 SPNS2Q8IVW8 549 aa14.44□□□□□ -0.1
CHPT1-209ENST00000552329 BHMG1C9JSJ3 638 aaPredicted RBP14.42□□□□□ -0.1
CHPT1-209ENST00000552329 MRPL50Q8N5N7 158 aaKnown RBP14.42□□□□□ -0.1
CHPT1-209ENST00000552329 TTC13Q8NBP0 860 aa14.42□□□□□ -0.1
CHPT1-209ENST00000552329 TATDN2Q93075 761 aa14.42□□□□□ -0.1
CHPT1-209ENST00000552329 NBPF3Q9H094 633 aa14.42□□□□□ -0.1
CHPT1-209ENST00000552329 RBM27Q9P2N5 1060 aaKnown RBP14.42□□□□□ -0.1
CHPT1-209ENST00000552329 KRI1Q8N9T8 703 aaKnown RBP14.41□□□□□ -0.1
CHPT1-209ENST00000552329 NBPF26B4DH59 902 aa14.4□□□□□ -0.1
CHPT1-209ENST00000552329 ADGRG1Q9Y653 693 aa14.39□□□□□ -0.11
CHPT1-209ENST00000552329 ONECUT3O60422 494 aaPredicted RBP14.38□□□□□ -0.11
CHPT1-209ENST00000552329 ZMYND10O75800 440 aa14.38□□□□□ -0.11
CHPT1-209ENST00000552329 GOLGA8CPA6NN73 597 aa14.37□□□□□ -0.11
CHPT1-209ENST00000552329 MYT1LQ9UL68 1186 aa14.37□□□□□ -0.11
CHPT1-209ENST00000552329 TPRNQ4KMQ1 711 aa14.36□□□□□ -0.11
CHPT1-209ENST00000552329 NLRP7Q8WX94 980 aa14.36□□□□□ -0.11
CHPT1-209ENST00000552329 BARGINQ6ZT62 677 aa14.34□□□□□ -0.11
CHPT1-209ENST00000552329 MAP2K5Q13163 448 aa14.33□□□□□ -0.12
CHPT1-209ENST00000552329 KCTD12Q96CX2 325 aaKnown RBP14.33□□□□□ -0.12
CHPT1-209ENST00000552329 IRF6O14896 467 aa14.32□□□□□ -0.12
CHPT1-209ENST00000552329 FAM98CQ17RN3 349 aaKnown RBP14.32□□□□□ -0.12
CHPT1-209ENST00000552329 RBM46Q8TBY0 533 aaKnown RBP14.32□□□□□ -0.12
CHPT1-209ENST00000552329 EYA1Q99502 592 aa14.32□□□□□ -0.12
CHPT1-209ENST00000552329 CCDC102AQ96A19 550 aa14.31□□□□□ -0.12
CHPT1-209ENST00000552329 ZFRQ96KR1 1074 aaKnown RBP14.31□□□□□ -0.12
CHPT1-209ENST00000552329 PLSCR2Q9NRY7 297 aa14.31□□□□□ -0.12
CHPT1-209ENST00000552329 PRKCSHP14314 528 aaPredicted RBP14.3□□□□□ -0.12
CHPT1-209ENST00000552329 WNT2BQ93097 391 aa14.3□□□□□ -0.12
CHPT1-209ENST00000552329 SLC24A3Q9HC58 644 aa14.3□□□□□ -0.12
CHPT1-209ENST00000552329 MMRN1Q13201 1228 aa14.29□□□□□ -0.12
CHPT1-209ENST00000552329 METTL3Q86U44 580 aaKnown RBP14.29□□□□□ -0.12
CHPT1-209ENST00000552329 LAPTM4BQ86VI4 370 aa14.29□□□□□ -0.12
CHPT1-209ENST00000552329 PHOX2BQ99453 314 aa14.29□□□□□ -0.12
CHPT1-209ENST00000552329 MINK1Q8N4C8 1332 aaPredicted RBP14.29□□□□□ -0.12
CHPT1-209ENST00000552329 PXYLP1Q8TE99 480 aa14.28□□□□□ -0.12
CHPT1-209ENST00000552329 RNF40O75150 1001 aa14.27□□□□□ -0.13
CHPT1-209ENST00000552329 OATP04181 439 aa14.27□□□□□ -0.13
CHPT1-209ENST00000552329 RCCD1A6NED2 376 aa14.26□□□□□ -0.13
CHPT1-209ENST00000552329 BCAMP50895 628 aa14.26□□□□□ -0.13
CHPT1-209ENST00000552329 SAMD7Q7Z3H4 446 aa14.26□□□□□ -0.13
CHPT1-209ENST00000552329 RNF166Q96A37 237 aaPredicted RBP14.26□□□□□ -0.13
CHPT1-209ENST00000552329 ANKK1Q8NFD2 765 aa14.25□□□□□ -0.13
CHPT1-209ENST00000552329 SWT1Q5T5J6 900 aaKnown RBP14.24□□□□□ -0.13
CHPT1-209ENST00000552329 PTPN5P54829 565 aa14.23□□□□□ -0.13
CHPT1-209ENST00000552329 DNAJB2P25686 324 aa14.22□□□□□ -0.13
CHPT1-209ENST00000552329 LRCH3Q96II8 777 aa14.21□□□□□ -0.13
CHPT1-209ENST00000552329 HDGFP51858 240 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms