RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 EIF4G1Q04637 1599 aaKnown RBP9.87□□□□□ -0.83
CPSF6-206ENST00000550987 PRIM1P49642 420 aaKnown RBP9.86□□□□□ -0.83
CPSF6-206ENST00000550987 PELP1Q8IZL8 1130 aaKnown RBP9.86□□□□□ -0.83
CPSF6-206ENST00000550987 RBM33Q96EV2 1170 aaKnown RBP9.86□□□□□ -0.83
CPSF6-206ENST00000550987 ATP1B4Q9UN42 357 aaPredicted RBP9.86□□□□□ -0.83
CPSF6-206ENST00000550987 C7P10643 843 aa9.85□□□□□ -0.83
CPSF6-206ENST00000550987 FLIIQ13045 1269 aa9.85□□□□□ -0.83
CPSF6-206ENST00000550987 GIGYF2Q6Y7W6 1299 aaKnown RBP9.85□□□□□ -0.83
CPSF6-206ENST00000550987 PCMTD1Q96MG8 357 aaPredicted RBP9.85□□□□□ -0.83
CPSF6-206ENST00000550987 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
CPSF6-206ENST00000550987 ERCC6L2Q5T890 1561 aa9.84□□□□□ -0.83
CPSF6-206ENST00000550987 PHF14O94880 888 aa9.83□□□□□ -0.84
CPSF6-206ENST00000550987 GOPCQ9HD26 462 aa9.83□□□□□ -0.84
CPSF6-206ENST00000550987 SLC34A2O95436 690 aa9.82□□□□□ -0.84
CPSF6-206ENST00000550987 CLCN1P35523 988 aa9.82□□□□□ -0.84
CPSF6-206ENST00000550987 EN1Q05925 392 aaPredicted RBP9.82□□□□□ -0.84
CPSF6-206ENST00000550987 DISP3Q9P2K9 1392 aa9.82□□□□□ -0.84
CPSF6-206ENST00000550987 SLAIN1Q8ND83 568 aa9.8□□□□□ -0.84
CPSF6-206ENST00000550987 CDHR5Q9HBB8 845 aa9.8□□□□□ -0.84
CPSF6-206ENST00000550987 METRNQ9UJH8 293 aa9.8□□□□□ -0.84
CPSF6-206ENST00000550987 MS4A1P11836 297 aa9.79□□□□□ -0.84
CPSF6-206ENST00000550987 MDM2Q00987 491 aaPredicted RBP9.79□□□□□ -0.84
CPSF6-206ENST00000550987 TYW1BQ6NUM6 668 aa9.79□□□□□ -0.84
CPSF6-206ENST00000550987 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.79□□□□□ -0.84
CPSF6-206ENST00000550987 ARID3AQ99856 593 aa9.78□□□□□ -0.84
CPSF6-206ENST00000550987 GPCPD1Q9NPB8 672 aa9.78□□□□□ -0.84
CPSF6-206ENST00000550987 NPDC1Q9NQX5 325 aaPredicted RBP9.78□□□□□ -0.84
CPSF6-206ENST00000550987 SSTR3P32745 418 aaPredicted RBP9.77□□□□□ -0.85
CPSF6-206ENST00000550987 FBXW7Q969H0 707 aa9.77□□□□□ -0.85
CPSF6-206ENST00000550987 PCDHGA10Q9Y5H3 936 aa9.77□□□□□ -0.85
CPSF6-206ENST00000550987 BAZ1AQ9NRL2 1556 aaPredicted RBP9.76□□□□□ -0.85
CPSF6-206ENST00000550987 REPIN1Q9BWE0 567 aaKnown RBP9.76□□□□□ -0.85
CPSF6-206ENST00000550987 PCDHGA4Q9Y5G9 962 aa9.76□□□□□ -0.85
CPSF6-206ENST00000550987 POTEFA5A3E0 1075 aa9.75□□□□□ -0.85
CPSF6-206ENST00000550987 OATP04181 439 aa9.75□□□□□ -0.85
CPSF6-206ENST00000550987 TSR1Q2NL82 804 aaKnown RBP9.75□□□□□ -0.85
CPSF6-206ENST00000550987 SH3D19Q5HYK7 790 aa9.73□□□□□ -0.85
CPSF6-206ENST00000550987 CERKQ8TCT0 537 aa9.73□□□□□ -0.85
CPSF6-206ENST00000550987 APBB1O00213 710 aa9.72□□□□□ -0.85
CPSF6-206ENST00000550987 UBTFP17480 764 aaKnown RBP9.72□□□□□ -0.85
CPSF6-206ENST00000550987 BEGAINQ9BUH8 593 aa9.72□□□□□ -0.85
CPSF6-206ENST00000550987 SKIV2LQ15477 1246 aaKnown RBP9.71□□□□□ -0.86
CPSF6-206ENST00000550987 FAM161AQ3B820 660 aa9.71□□□□□ -0.86
CPSF6-206ENST00000550987 JPH4Q96JJ6 628 aa9.71□□□□□ -0.86
CPSF6-206ENST00000550987 THOC2Q8NI27 1593 aaKnown RBP9.71□□□□□ -0.86
CPSF6-206ENST00000550987 PHOX2BQ99453 314 aa9.7□□□□□ -0.86
CPSF6-206ENST00000550987 TMUB1Q9BVT8 246 aa9.7□□□□□ -0.86
CPSF6-206ENST00000550987 ARID3CA6NKF2 412 aa9.69□□□□□ -0.86
CPSF6-206ENST00000550987 ARHGEF11O15085 1522 aa9.69□□□□□ -0.86
CPSF6-206ENST00000550987 C6orf132Q5T0Z8 1188 aa9.69□□□□□ -0.86
CPSF6-206ENST00000550987 ZNF454Q8N9F8 522 aa9.69□□□□□ -0.86
CPSF6-206ENST00000550987 POLR3EQ9NVU0 708 aa9.69□□□□□ -0.86
CPSF6-206ENST00000550987 NACADO15069 1562 aa9.68□□□□□ -0.86
CPSF6-206ENST00000550987 METTL3Q86U44 580 aaKnown RBP9.68□□□□□ -0.86
CPSF6-206ENST00000550987 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
CPSF6-206ENST00000550987 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
CPSF6-206ENST00000550987 NLRP7Q8WX94 980 aa9.67□□□□□ -0.86
CPSF6-206ENST00000550987 FOSBP53539 338 aa9.66□□□□□ -0.86
CPSF6-206ENST00000550987 CLUAP1Q96AJ1 413 aa9.66□□□□□ -0.86
CPSF6-206ENST00000550987 FAM217BQ9NTX9 383 aaPredicted RBP9.66□□□□□ -0.86
CPSF6-206ENST00000550987 A6NJR5 290 aa9.65□□□□□ -0.86
CPSF6-206ENST00000550987 PROCA1Q8NCQ7 364 aaPredicted RBP9.65□□□□□ -0.86
CPSF6-206ENST00000550987 PXYLP1Q8TE99 480 aa9.65□□□□□ -0.86
CPSF6-206ENST00000550987 ADGRG1Q9Y653 693 aa9.65□□□□□ -0.86
CPSF6-206ENST00000550987 RAD21O60216 631 aa9.64□□□□□ -0.87
CPSF6-206ENST00000550987 ONECUT3O60422 494 aaPredicted RBP9.64□□□□□ -0.87
CPSF6-206ENST00000550987 RBM46Q8TBY0 533 aaKnown RBP9.64□□□□□ -0.87
CPSF6-206ENST00000550987 SHROOM4Q9ULL8 1493 aa9.64□□□□□ -0.87
CPSF6-206ENST00000550987 SPATA31D1Q6ZQQ2 1576 aa9.63□□□□□ -0.87
CPSF6-206ENST00000550987 C1orf115Q9H7X2 142 aa9.63□□□□□ -0.87
CPSF6-206ENST00000550987 HECW2Q9P2P5 1572 aa9.63□□□□□ -0.87
CPSF6-206ENST00000550987 RIMBP2O15034 1052 aa9.62□□□□□ -0.87
CPSF6-206ENST00000550987 TRAK2O60296 914 aa9.62□□□□□ -0.87
CPSF6-206ENST00000550987 NUDT7P0C024 238 aa9.62□□□□□ -0.87
CPSF6-206ENST00000550987 DIXDC1Q155Q3 683 aa9.62□□□□□ -0.87
CPSF6-206ENST00000550987 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
CPSF6-206ENST00000550987 POTEIP0CG38 1075 aa9.61□□□□□ -0.87
CPSF6-206ENST00000550987 PRSS12P56730 875 aa9.61□□□□□ -0.87
CPSF6-206ENST00000550987 MCM6Q14566 821 aa9.61□□□□□ -0.87
CPSF6-206ENST00000550987 ARSIQ5FYB1 569 aa9.61□□□□□ -0.87
CPSF6-206ENST00000550987 KDM4FA0A1W2PPD8 638 aa9.6□□□□□ -0.87
CPSF6-206ENST00000550987 CDCA7LQ96GN5 454 aa9.6□□□□□ -0.87
CPSF6-206ENST00000550987 RBM27Q9P2N5 1060 aaKnown RBP9.6□□□□□ -0.87
CPSF6-206ENST00000550987 MYSM1Q5VVJ2 828 aa9.59□□□□□ -0.87
CPSF6-206ENST00000550987 CYB5RLQ6IPT4 315 aa9.59□□□□□ -0.87
CPSF6-206ENST00000550987 TBC1D2Q9BYX2 928 aa9.59□□□□□ -0.87
CPSF6-206ENST00000550987 ADAM33Q9BZ11 813 aa9.59□□□□□ -0.87
CPSF6-206ENST00000550987 CLK2P49760 499 aaKnown RBP9.58□□□□□ -0.88
CPSF6-206ENST00000550987 ZNF710Q8N1W2 664 aa9.58□□□□□ -0.88
CPSF6-206ENST00000550987 KHSRPQ92945 711 aaKnown RBP eCLIP9.58□□□□□ -0.884e-8■■■□□ 17.7
CPSF6-206ENST00000550987 PODXL2Q9NZ53 605 aa9.57□□□□□ -0.88
CPSF6-206ENST00000550987 ZNF777Q9ULD5 760 aaPredicted RBP9.57□□□□□ -0.88
CPSF6-206ENST00000550987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.56□□□□□ -0.88
CPSF6-206ENST00000550987 TTC13Q8NBP0 860 aa9.56□□□□□ -0.88
CPSF6-206ENST00000550987 PPP4R3BQ5MIZ7 849 aa9.55□□□□□ -0.88
CPSF6-206ENST00000550987 PROSER2Q86WR7 435 aaPredicted RBP9.55□□□□□ -0.88
CPSF6-206ENST00000550987 NUTM1Q86Y26 1132 aa9.55□□□□□ -0.88
CPSF6-206ENST00000550987 RCCD1A6NED2 376 aa9.54□□□□□ -0.88
CPSF6-206ENST00000550987 CCDC82Q8N4S0 544 aa9.54□□□□□ -0.88
CPSF6-206ENST00000550987 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms