RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 TESPA1A2RU30 521 aaPredicted RBP13.01□□□□□ -0.33
LETMD1-226ENST00000550755 OSBPP22059 807 aa13□□□□□ -0.33
LETMD1-226ENST00000550755 PSEN2P49810 448 aa13□□□□□ -0.33
LETMD1-226ENST00000550755 KRTAP3-3Q9BYR6 98 aa13□□□□□ -0.33
LETMD1-226ENST00000550755 KRTAP3-2Q9BYR7 98 aa13□□□□□ -0.33
LETMD1-226ENST00000550755 LSM11P83369 360 aaKnown RBP eCLIP12.99□□□□□ -0.33
LETMD1-226ENST00000550755 C6orf132Q5T0Z8 1188 aa12.99□□□□□ -0.33
LETMD1-226ENST00000550755 POTEEQ6S8J3 1075 aa12.98□□□□□ -0.33
LETMD1-226ENST00000550755 ANKRD13DQ6ZTN6 518 aa12.98□□□□□ -0.33
LETMD1-226ENST00000550755 PPP1R3GB7ZBB8 358 aa12.96□□□□□ -0.33
LETMD1-226ENST00000550755 TSR1Q2NL82 804 aaKnown RBP12.93□□□□□ -0.34
LETMD1-226ENST00000550755 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
LETMD1-226ENST00000550755 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
LETMD1-226ENST00000550755 NUTM2FA1L443 756 aa12.91□□□□□ -0.34
LETMD1-226ENST00000550755 TK2O00142 265 aa12.91□□□□□ -0.34
LETMD1-226ENST00000550755 PRIM1P49642 420 aaKnown RBP12.91□□□□□ -0.34
LETMD1-226ENST00000550755 COL9A1P20849 921 aa12.9□□□□□ -0.34
LETMD1-226ENST00000550755 ADGRD1Q6QNK2 874 aa12.89□□□□□ -0.35
LETMD1-226ENST00000550755 STAC3Q96MF2 364 aa12.89□□□□□ -0.35
LETMD1-226ENST00000550755 SLC4A5Q9BY07 1137 aa12.89□□□□□ -0.35
LETMD1-226ENST00000550755 ZBED2Q9BTP6 218 aa12.88□□□□□ -0.35
LETMD1-226ENST00000550755 RBM26Q5T8P6 1007 aaKnown RBP12.86□□□□□ -0.35
LETMD1-226ENST00000550755 BCANQ96GW7 911 aa12.86□□□□□ -0.35
LETMD1-226ENST00000550755 CDHR5Q9HBB8 845 aa12.86□□□□□ -0.35
LETMD1-226ENST00000550755 VPS9D1Q9Y2B5 631 aa12.86□□□□□ -0.35
LETMD1-226ENST00000550755 PROX2Q3B8N5 592 aa12.82□□□□□ -0.36
LETMD1-226ENST00000550755 FCHSD2O94868 740 aa12.81□□□□□ -0.36
LETMD1-226ENST00000550755 PRSS12P56730 875 aa12.81□□□□□ -0.36
LETMD1-226ENST00000550755 SPNS2Q8IVW8 549 aa12.81□□□□□ -0.36
LETMD1-226ENST00000550755 CDCA7LQ96GN5 454 aa12.81□□□□□ -0.36
LETMD1-226ENST00000550755 TRIM6-TRIM34B2RNG4 842 aa12.8□□□□□ -0.36
LETMD1-226ENST00000550755 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
LETMD1-226ENST00000550755 PACS2Q86VP3 889 aa12.8□□□□□ -0.36
LETMD1-226ENST00000550755 GPIHBP1Q8IV16 184 aa12.8□□□□□ -0.36
LETMD1-226ENST00000550755 NBPF3Q9H094 633 aa12.8□□□□□ -0.36
LETMD1-226ENST00000550755 PTGDRQ13258 359 aa12.79□□□□□ -0.36
LETMD1-226ENST00000550755 RABGEF1Q9UJ41 708 aa12.79□□□□□ -0.36
LETMD1-226ENST00000550755 NPDC1Q9NQX5 325 aaPredicted RBP12.78□□□□□ -0.36
LETMD1-226ENST00000550755 RBM27Q9P2N5 1060 aaKnown RBP12.78□□□□□ -0.36
LETMD1-226ENST00000550755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.37
LETMD1-226ENST00000550755 KIAA1468Q9P260 1216 aa12.77□□□□□ -0.37
LETMD1-226ENST00000550755 HRO43593 1189 aa12.76□□□□□ -0.37
LETMD1-226ENST00000550755 LMOD2Q6P5Q4 547 aa12.76□□□□□ -0.37
LETMD1-226ENST00000550755 MRPL50Q8N5N7 158 aaKnown RBP12.76□□□□□ -0.37
LETMD1-226ENST00000550755 MYT1LQ9UL68 1186 aa12.76□□□□□ -0.37
LETMD1-226ENST00000550755 GOLGA8CPA6NN73 597 aa12.75□□□□□ -0.37
LETMD1-226ENST00000550755 HIC1Q14526 733 aa12.75□□□□□ -0.37
LETMD1-226ENST00000550755 TSKSQ9UJT2 592 aa12.74□□□□□ -0.37
LETMD1-226ENST00000550755 NBPF26B4DH59 902 aa12.73□□□□□ -0.37
LETMD1-226ENST00000550755 PADI6Q6TGC4 694 aa12.73□□□□□ -0.37
LETMD1-226ENST00000550755 BHMG1C9JSJ3 638 aaPredicted RBP12.72□□□□□ -0.37
LETMD1-226ENST00000550755 PLSCR2Q9NRY7 297 aa12.71□□□□□ -0.37
LETMD1-226ENST00000550755 GNPATO15228 680 aa12.7□□□□□ -0.38
LETMD1-226ENST00000550755 LAPTM4BQ86VI4 370 aa12.7□□□□□ -0.38
LETMD1-226ENST00000550755 MMRN1Q13201 1228 aa12.68□□□□□ -0.38
LETMD1-226ENST00000550755 TATDN2Q93075 761 aa12.68□□□□□ -0.38
LETMD1-226ENST00000550755 SEPT9Q9UHD8 586 aaPredicted RBP12.68□□□□□ -0.38
LETMD1-226ENST00000550755 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
LETMD1-226ENST00000550755 TTC13Q8NBP0 860 aa12.67□□□□□ -0.38
LETMD1-226ENST00000550755 RNF166Q96A37 237 aaPredicted RBP12.67□□□□□ -0.38
LETMD1-226ENST00000550755 FAM198AQ9UFP1 575 aa12.67□□□□□ -0.38
LETMD1-226ENST00000550755 FAM98CQ17RN3 349 aaKnown RBP12.66□□□□□ -0.38
LETMD1-226ENST00000550755 NUDT18Q6ZVK8 323 aa12.66□□□□□ -0.38
LETMD1-226ENST00000550755 GPR37O15354 613 aa12.65□□□□□ -0.38
LETMD1-226ENST00000550755 SMAPO00193 183 aa12.63□□□□□ -0.39
LETMD1-226ENST00000550755 RBM46Q8TBY0 533 aaKnown RBP12.63□□□□□ -0.39
LETMD1-226ENST00000550755 WNT2BQ93097 391 aa12.63□□□□□ -0.39
LETMD1-226ENST00000550755 HDGFP51858 240 aaKnown RBP12.62□□□□□ -0.39
LETMD1-226ENST00000550755 ANKK1Q8NFD2 765 aa12.62□□□□□ -0.39
LETMD1-226ENST00000550755 KCTD12Q96CX2 325 aaKnown RBP12.62□□□□□ -0.39
LETMD1-226ENST00000550755 OATP04181 439 aa12.61□□□□□ -0.39
LETMD1-226ENST00000550755 ZFRQ96KR1 1074 aaKnown RBP12.61□□□□□ -0.39
LETMD1-226ENST00000550755 ADGRG1Q9Y653 693 aa12.6□□□□□ -0.39
LETMD1-226ENST00000550755 FECHP22830 423 aa12.59□□□□□ -0.39
LETMD1-226ENST00000550755 ZC3H15Q8WU90 426 aaKnown RBP12.58□□□□□ -0.4
LETMD1-226ENST00000550755 C3orf80F5H4A9 247 aa12.57□□□□□ -0.4
LETMD1-226ENST00000550755 FAM161AQ3B820 660 aa12.57□□□□□ -0.4
LETMD1-226ENST00000550755 KRI1Q8N9T8 703 aaKnown RBP12.57□□□□□ -0.4
LETMD1-226ENST00000550755 MAP2K5Q13163 448 aa12.56□□□□□ -0.4
LETMD1-226ENST00000550755 LRCH3Q96II8 777 aa12.56□□□□□ -0.4
LETMD1-226ENST00000550755 EYA1Q99502 592 aa12.56□□□□□ -0.4
LETMD1-226ENST00000550755 SLC4A3P48751 1232 aa12.55□□□□□ -0.4
LETMD1-226ENST00000550755 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-226ENST00000550755 MINK1Q8N4C8 1332 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-226ENST00000550755 DNAJB2P25686 324 aa12.53□□□□□ -0.4
LETMD1-226ENST00000550755 THSD4Q6ZMP0 1018 aa12.53□□□□□ -0.4
LETMD1-226ENST00000550755 ZMYND10O75800 440 aa12.52□□□□□ -0.41
LETMD1-226ENST00000550755 SAMD7Q7Z3H4 446 aa12.52□□□□□ -0.41
LETMD1-226ENST00000550755 METTL3Q86U44 580 aaKnown RBP12.52□□□□□ -0.41
LETMD1-226ENST00000550755 PXYLP1Q8TE99 480 aa12.52□□□□□ -0.41
LETMD1-226ENST00000550755 HCSTQ9UBK5 93 aa12.52□□□□□ -0.41
LETMD1-226ENST00000550755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.51□□□□□ -0.41
LETMD1-226ENST00000550755 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
LETMD1-226ENST00000550755 PTPN5P54829 565 aa12.51□□□□□ -0.41
LETMD1-226ENST00000550755 BARGINQ6ZT62 677 aa12.51□□□□□ -0.41
LETMD1-226ENST00000550755 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
LETMD1-226ENST00000550755 IRF6O14896 467 aa12.5□□□□□ -0.41
LETMD1-226ENST00000550755 BCAMP50895 628 aa12.5□□□□□ -0.41
LETMD1-226ENST00000550755 RNF40O75150 1001 aa12.49□□□□□ -0.41
LETMD1-226ENST00000550755 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms