RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-218ENST00000550692 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
BRF1-218ENST00000550692 PREX1Q8TCU6 1659 aa17.35■□□□□ 0.37
BRF1-218ENST00000550692 KIF15Q9NS87 1388 aa17.34■□□□□ 0.37
BRF1-218ENST00000550692 DUOX2Q9NRD8 1548 aa17.33■□□□□ 0.37
BRF1-218ENST00000550692 UHRF1BP1Q6BDS2 1440 aa17.32■□□□□ 0.36
BRF1-218ENST00000550692 WASHC2CQ9Y4E1 1318 aa17.32■□□□□ 0.36
BRF1-218ENST00000550692 NPATQ14207 1427 aa17.3■□□□□ 0.36
BRF1-218ENST00000550692 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
BRF1-218ENST00000550692 ANKRD30AQ9BXX3 1397 aa17.3■□□□□ 0.36
BRF1-218ENST00000550692 EIF2AK4Q9P2K8 1649 aaKnown RBP17.29■□□□□ 0.36
BRF1-218ENST00000550692 KDM5DQ9BY66 1539 aa17.29■□□□□ 0.36
BRF1-218ENST00000550692 NCOA1Q15788 1441 aa17.29■□□□□ 0.36
BRF1-218ENST00000550692 RNF17Q9BXT8 1623 aaKnown RBP17.29■□□□□ 0.36
BRF1-218ENST00000550692 FAM135AQ9P2D6 1515 aa17.27■□□□□ 0.36
BRF1-218ENST00000550692 FBXO31Q5XUX0 539 aaPredicted RBP17.27■□□□□ 0.36
BRF1-218ENST00000550692 MROH1Q8NDA8 1641 aa17.26■□□□□ 0.35
BRF1-218ENST00000550692 ERBINQ96RT1 1412 aa17.26■□□□□ 0.35
BRF1-218ENST00000550692 ADGRL2O95490 1459 aa17.25■□□□□ 0.35
BRF1-218ENST00000550692 ABCC3O15438 1527 aa17.24■□□□□ 0.35
BRF1-218ENST00000550692 PZPP20742 1482 aa17.24■□□□□ 0.35
BRF1-218ENST00000550692 ITGAEP38570 1179 aa17.23■□□□□ 0.35
BRF1-218ENST00000550692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.23■□□□□ 0.35
BRF1-218ENST00000550692 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.21■□□□□ 0.35
BRF1-218ENST00000550692 CEP152O94986 1710 aa17.21■□□□□ 0.35
BRF1-218ENST00000550692 MYO3AQ8NEV4 1616 aa17.21■□□□□ 0.35
BRF1-218ENST00000550692 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
BRF1-218ENST00000550692 TNRQ92752 1358 aa17.2■□□□□ 0.34
BRF1-218ENST00000550692 PRDM15P57071 1507 aaPredicted RBP17.2■□□□□ 0.34
BRF1-218ENST00000550692 STRCQ7RTU9 1775 aa17.2■□□□□ 0.34
BRF1-218ENST00000550692 ANKRD50Q9ULJ7 1429 aa17.19■□□□□ 0.34
BRF1-218ENST00000550692 DEPDC5O75140 1603 aa17.18■□□□□ 0.34
BRF1-218ENST00000550692 RRBP1Q9P2E9 1410 aaKnown RBP17.18■□□□□ 0.34
BRF1-218ENST00000550692 CEP170BQ9Y4F5 1589 aaPredicted RBP17.18■□□□□ 0.34
BRF1-218ENST00000550692 CAMSAP1Q5T5Y3 1602 aa17.17■□□□□ 0.34
BRF1-218ENST00000550692 ZNF142P52746 1687 aaPredicted RBP17.16■□□□□ 0.34
BRF1-218ENST00000550692 ROCK1Q13464 1354 aa17.16■□□□□ 0.34
BRF1-218ENST00000550692 CFAP65Q6ZU64 1925 aaKnown RBP17.16■□□□□ 0.34
BRF1-218ENST00000550692 KANK1Q14678 1352 aa17.15■□□□□ 0.34
BRF1-218ENST00000550692 CERKQ8TCT0 537 aa17.15■□□□□ 0.34
BRF1-218ENST00000550692 A2ML1A8K2U0 1454 aa17.15■□□□□ 0.34
BRF1-218ENST00000550692 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
BRF1-218ENST00000550692 ERVK-7P63135 1459 aa17.13■□□□□ 0.33
BRF1-218ENST00000550692 SPATA31D1Q6ZQQ2 1576 aa17.13■□□□□ 0.33
BRF1-218ENST00000550692 VWDEQ8N2E2 1590 aa17.13■□□□□ 0.33
BRF1-218ENST00000550692 ARHGAP31Q2M1Z3 1444 aa17.13■□□□□ 0.33
BRF1-218ENST00000550692 NCKAP5LQ9HCH0 1330 aa17.12■□□□□ 0.33
BRF1-218ENST00000550692 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
BRF1-218ENST00000550692 LMTK2Q8IWU2 1503 aa17.11■□□□□ 0.33
BRF1-218ENST00000550692 PLA2R1Q13018 1463 aa17.1■□□□□ 0.33
BRF1-218ENST00000550692 PTPRTO14522 1441 aa17.09■□□□□ 0.33
BRF1-218ENST00000550692 PKD2Q13563 968 aa17.08■□□□□ 0.32
BRF1-218ENST00000550692 UGGT1Q9NYU2 1555 aa17.06■□□□□ 0.32
BRF1-218ENST00000550692 THEMISQ8N1K5 641 aaPredicted RBP17.06■□□□□ 0.32
BRF1-218ENST00000550692 UNC13BO14795 1591 aa17.06■□□□□ 0.32
BRF1-218ENST00000550692 EFCAB6Q5THR3 1501 aa17.06■□□□□ 0.32
BRF1-218ENST00000550692 NUP155O75694 1391 aa17.02■□□□□ 0.32
BRF1-218ENST00000550692 ANKLE2Q86XL3 938 aa17.02■□□□□ 0.32
BRF1-218ENST00000550692 NOS1P29475 1434 aa17.02■□□□□ 0.31
BRF1-218ENST00000550692 TET3O43151 1660 aa17.01■□□□□ 0.31
BRF1-218ENST00000550692 IDI1Q13907 227 aa17.01■□□□□ 0.31
BRF1-218ENST00000550692 NAIPQ13075 1403 aa17.01■□□□□ 0.31
BRF1-218ENST00000550692 SYNMO15061 1565 aa17■□□□□ 0.31
BRF1-218ENST00000550692 UBR1Q8IWV7 1749 aa17■□□□□ 0.31
BRF1-218ENST00000550692 RPRD2Q5VT52 1461 aaKnown RBP16.99■□□□□ 0.31
BRF1-218ENST00000550692 NEURL4Q96JN8 1562 aa16.99■□□□□ 0.31
BRF1-218ENST00000550692 IQGAP3Q86VI3 1631 aa16.99■□□□□ 0.31
BRF1-218ENST00000550692 POLR1AO95602 1720 aaPredicted RBP16.99■□□□□ 0.31
BRF1-218ENST00000550692 GCC2Q8IWJ2 1684 aa16.98■□□□□ 0.31
BRF1-218ENST00000550692 PIK3C2BO00750 1634 aa16.98■□□□□ 0.31
BRF1-218ENST00000550692 STAG3Q9UJ98 1225 aa16.97■□□□□ 0.31
BRF1-218ENST00000550692 E9PCH4 1651 aa16.97■□□□□ 0.31
BRF1-218ENST00000550692 ZNF335Q9H4Z2 1342 aaPredicted RBP16.96■□□□□ 0.31
BRF1-218ENST00000550692 SLC52A1Q9NWF4 448 aa16.96■□□□□ 0.31
BRF1-218ENST00000550692 LTBP4Q8N2S1 1624 aa16.96■□□□□ 0.3
BRF1-218ENST00000550692 HFM1A2PYH4 1435 aa16.96■□□□□ 0.3
BRF1-218ENST00000550692 LTKP29376 864 aa16.95■□□□□ 0.3
BRF1-218ENST00000550692 NPHP4O75161 1426 aaPredicted RBP16.94■□□□□ 0.3
BRF1-218ENST00000550692 MED14O60244 1454 aa16.93■□□□□ 0.3
BRF1-218ENST00000550692 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
BRF1-218ENST00000550692 SLIT1O75093 1534 aa16.93■□□□□ 0.3
BRF1-218ENST00000550692 TXNDC2Q86VQ3 553 aa16.93■□□□□ 0.3
BRF1-218ENST00000550692 TMEM2Q9UHN6 1383 aa16.92■□□□□ 0.3
BRF1-218ENST00000550692 SCAF11Q99590 1463 aaKnown RBP16.91■□□□□ 0.3
BRF1-218ENST00000550692 KDM5AP29375 1690 aaKnown RBP16.91■□□□□ 0.3
BRF1-218ENST00000550692 TRIM52Q96A61 297 aa16.9■□□□□ 0.3
BRF1-218ENST00000550692 EID1Q9Y6B2 187 aa16.9■□□□□ 0.3
BRF1-218ENST00000550692 ADGRB3O60242 1522 aa16.9■□□□□ 0.3
BRF1-218ENST00000550692 IQGAP1P46940 1657 aa16.89■□□□□ 0.29
BRF1-218ENST00000550692 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
BRF1-218ENST00000550692 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
BRF1-218ENST00000550692 TMEM131LA2VDJ0 1609 aa16.85■□□□□ 0.29
BRF1-218ENST00000550692 SPHKAPQ2M3C7 1700 aa16.83■□□□□ 0.28
BRF1-218ENST00000550692 ILDR2Q71H61 639 aa16.83■□□□□ 0.28
BRF1-218ENST00000550692 SLC4A1APQ9BWU0 796 aaKnown RBP16.83■□□□□ 0.28
BRF1-218ENST00000550692 DISP3Q9P2K9 1392 aa16.83■□□□□ 0.28
BRF1-218ENST00000550692 RIMS2Q9UQ26 1411 aa16.82■□□□□ 0.28
BRF1-218ENST00000550692 IQSEC2Q5JU85 1478 aa16.81■□□□□ 0.28
BRF1-218ENST00000550692 ZFYVE9O95405 1425 aa16.81■□□□□ 0.28
BRF1-218ENST00000550692 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
BRF1-218ENST00000550692 NUTM2DQ5VT03 806 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms