RNA–Protein interactions for RNA: ENST00000550548.1

AC007424.1-202, humanhuman

TSL 1 (best)

Gene AC007424.1, Length 2,945 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007424.1-202ENST00000550548 DNTTIP2Q5QJE6 756 aaKnown RBP15.74■□□□□ 0.11
AC007424.1-202ENST00000550548 POLR3GLQ9BT43 218 aa15.74■□□□□ 0.11
AC007424.1-202ENST00000550548 MYOM3Q5VTT5 1437 aa15.74■□□□□ 0.11
AC007424.1-202ENST00000550548 KDM5BQ9UGL1 1544 aa15.73■□□□□ 0.11
AC007424.1-202ENST00000550548 TRAK2O60296 914 aa15.73■□□□□ 0.11
AC007424.1-202ENST00000550548 RAPGEF2Q9Y4G8 1499 aa15.72■□□□□ 0.11
AC007424.1-202ENST00000550548 ZNF500O60304 480 aaPredicted RBP15.72■□□□□ 0.11
AC007424.1-202ENST00000550548 SCRIBQ14160 1630 aa15.72■□□□□ 0.11
AC007424.1-202ENST00000550548 R3HCC1Q9Y3T6 440 aaKnown RBP15.71■□□□□ 0.11
AC007424.1-202ENST00000550548 DDX11L8A8MPP1 907 aa15.71■□□□□ 0.1
AC007424.1-202ENST00000550548 MMP14P50281 582 aa15.7■□□□□ 0.1
AC007424.1-202ENST00000550548 TICAM2Q86XR7 235 aa15.7■□□□□ 0.1
AC007424.1-202ENST00000550548 DNAJC2Q99543 621 aaKnown RBP15.7■□□□□ 0.1
AC007424.1-202ENST00000550548 CECR2Q9BXF3 1484 aa15.7■□□□□ 0.1
AC007424.1-202ENST00000550548 CCDC9Q9Y3X0 531 aaKnown RBP15.7■□□□□ 0.1
AC007424.1-202ENST00000550548 VIRMAQ69YN4 1812 aaKnown RBP15.69■□□□□ 0.1
AC007424.1-202ENST00000550548 SASS6Q6UVJ0 657 aa15.67■□□□□ 0.1
AC007424.1-202ENST00000550548 GRIPAP1Q4V328 841 aa15.67■□□□□ 0.1
AC007424.1-202ENST00000550548 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.67■□□□□ 0.1
AC007424.1-202ENST00000550548 POLR1AO95602 1720 aaPredicted RBP15.67■□□□□ 0.1
AC007424.1-202ENST00000550548 TOP2AP11388 1531 aaKnown RBP15.66■□□□□ 0.1
AC007424.1-202ENST00000550548 PTMSP20962 102 aa15.66■□□□□ 0.1
AC007424.1-202ENST00000550548 GZF1Q9H116 711 aaPredicted RBP15.66■□□□□ 0.1
AC007424.1-202ENST00000550548 MCM5P33992 734 aa15.66■□□□□ 0.1
AC007424.1-202ENST00000550548 TMED8Q6PL24 325 aaPredicted RBP15.66■□□□□ 0.1
AC007424.1-202ENST00000550548 SCAPERQ9BY12 1400 aa15.66■□□□□ 0.1
AC007424.1-202ENST00000550548 SLKQ9H2G2 1235 aaPredicted RBP15.65■□□□□ 0.1
AC007424.1-202ENST00000550548 USP19O94966 1318 aa15.65■□□□□ 0.1
AC007424.1-202ENST00000550548 CLGNO14967 610 aa15.65■□□□□ 0.1
AC007424.1-202ENST00000550548 IGSF3O75054 1194 aa15.64■□□□□ 0.09
AC007424.1-202ENST00000550548 PNISRQ8TF01 805 aaKnown RBP15.64■□□□□ 0.09
AC007424.1-202ENST00000550548 LRPPRCP42704 1394 aaKnown RBP15.64■□□□□ 0.09
AC007424.1-202ENST00000550548 CCDC144AA2RUR9 1427 aa15.64■□□□□ 0.09
AC007424.1-202ENST00000550548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.64■□□□□ 0.09
AC007424.1-202ENST00000550548 FAM193AP78312 1265 aa15.64■□□□□ 0.09
AC007424.1-202ENST00000550548 SLC52A1Q9NWF4 448 aa15.64■□□□□ 0.09
AC007424.1-202ENST00000550548 CHMP5Q9NZZ3 219 aa15.63■□□□□ 0.09
AC007424.1-202ENST00000550548 NOL7Q9UMY1 257 aaKnown RBP15.63■□□□□ 0.09
AC007424.1-202ENST00000550548 SKOR2Q2VWA4 1001 aaPredicted RBP15.62■□□□□ 0.09
AC007424.1-202ENST00000550548 UACAQ9BZF9 1416 aa15.61■□□□□ 0.09
AC007424.1-202ENST00000550548 KCNA4P22459 653 aa15.61■□□□□ 0.09
AC007424.1-202ENST00000550548 HDAC5Q9UQL6 1122 aa15.61■□□□□ 0.09
AC007424.1-202ENST00000550548 AXDND1Q5T1B0 1012 aaPredicted RBP15.6■□□□□ 0.09
AC007424.1-202ENST00000550548 YY1AP1Q9H869 796 aa15.6■□□□□ 0.09
AC007424.1-202ENST00000550548 CRBNQ96SW2 442 aa15.6■□□□□ 0.09
AC007424.1-202ENST00000550548 IRX5P78411 483 aaPredicted RBP15.59■□□□□ 0.09
AC007424.1-202ENST00000550548 FAM43BQ6ZT52 329 aaPredicted RBP15.59■□□□□ 0.09
AC007424.1-202ENST00000550548 TSPYL1Q9H0U9 437 aa15.59■□□□□ 0.09
AC007424.1-202ENST00000550548 CGNQ9P2M7 1197 aaKnown RBP15.58■□□□□ 0.09
AC007424.1-202ENST00000550548 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.09
AC007424.1-202ENST00000550548 NBPF1Q3BBV0 1214 aa15.57■□□□□ 0.08
AC007424.1-202ENST00000550548 IBTKQ9P2D0 1353 aaPredicted RBP15.57■□□□□ 0.08
AC007424.1-202ENST00000550548 DHX29Q7Z478 1369 aaKnown RBP15.57■□□□□ 0.08
AC007424.1-202ENST00000550548 PTMAP06454 111 aaKnown RBP15.57■□□□□ 0.08
AC007424.1-202ENST00000550548 PSEN1P49768 467 aa15.57■□□□□ 0.08
AC007424.1-202ENST00000550548 SKAP1Q86WV1 359 aa15.57■□□□□ 0.08
AC007424.1-202ENST00000550548 NINLQ9Y2I6 1382 aa15.56■□□□□ 0.08
AC007424.1-202ENST00000550548 PATL2C9JE40 543 aaKnown RBP15.55■□□□□ 0.08
AC007424.1-202ENST00000550548 NASPP49321 788 aaPredicted RBP15.55■□□□□ 0.08
AC007424.1-202ENST00000550548 MYRIPQ8NFW9 859 aa15.55■□□□□ 0.08
AC007424.1-202ENST00000550548 CCDC66A2RUB6 948 aa15.55■□□□□ 0.08
AC007424.1-202ENST00000550548 NLRP1Q9C000 1473 aa15.55■□□□□ 0.08
AC007424.1-202ENST00000550548 ROCK2O75116 1388 aaKnown RBP15.55■□□□□ 0.08
AC007424.1-202ENST00000550548 CBX1P83916 185 aa15.54■□□□□ 0.08
AC007424.1-202ENST00000550548 TMC1Q8TDI8 760 aa15.54■□□□□ 0.08
AC007424.1-202ENST00000550548 ZNF622Q969S3 477 aaKnown RBP eCLIP15.54■□□□□ 0.08
AC007424.1-202ENST00000550548 MYCNP04198 464 aaPredicted RBP15.54■□□□□ 0.08
AC007424.1-202ENST00000550548 GTF2F1P35269 517 aaKnown RBP eCLIP15.54■□□□□ 0.08
AC007424.1-202ENST00000550548 CFAP44Q96MT7 982 aa15.54■□□□□ 0.08
AC007424.1-202ENST00000550548 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
AC007424.1-202ENST00000550548 RBM25P49756 843 aaKnown RBP15.54■□□□□ 0.08
AC007424.1-202ENST00000550548 GAS2L3Q86XJ1 694 aa15.54■□□□□ 0.08
AC007424.1-202ENST00000550548 ZMYM3Q14202 1370 aa15.53■□□□□ 0.08
AC007424.1-202ENST00000550548 ZNF592Q92610 1267 aa15.53■□□□□ 0.08
AC007424.1-202ENST00000550548 PRIMPOLQ96LW4 560 aa15.53■□□□□ 0.08
AC007424.1-202ENST00000550548 TBC1D2Q9BYX2 928 aa15.53■□□□□ 0.08
AC007424.1-202ENST00000550548 GEMIN8Q9NWZ8 242 aaKnown RBP15.53■□□□□ 0.08
AC007424.1-202ENST00000550548 HMGN5P82970 282 aaKnown RBP15.53■□□□□ 0.08
AC007424.1-202ENST00000550548 TMEM132AQ24JP5 1023 aa15.53■□□□□ 0.08
AC007424.1-202ENST00000550548 ARID3AQ99856 593 aa15.53■□□□□ 0.08
AC007424.1-202ENST00000550548 UPF2Q9HAU5 1272 aaKnown RBP15.53■□□□□ 0.08
AC007424.1-202ENST00000550548 INSRP06213 1382 aa15.53■□□□□ 0.08
AC007424.1-202ENST00000550548 KIF7Q2M1P5 1343 aa15.52■□□□□ 0.08
AC007424.1-202ENST00000550548 MAPK8IP2Q13387 824 aaPredicted RBP15.52■□□□□ 0.08
AC007424.1-202ENST00000550548 BRD4O60885 1362 aaPredicted RBP15.52■□□□□ 0.08
AC007424.1-202ENST00000550548 GABPB1Q06547 395 aaPredicted RBP15.52■□□□□ 0.07
AC007424.1-202ENST00000550548 ZKSCAN5Q9Y2L8 839 aa15.52■□□□□ 0.07
AC007424.1-202ENST00000550548 MAPK8IP3Q9UPT6 1336 aa15.5■□□□□ 0.07
AC007424.1-202ENST00000550548 CCDC18Q5T9S5 1454 aa15.49■□□□□ 0.07
AC007424.1-202ENST00000550548 PDLIM2Q96JY6 352 aa15.49■□□□□ 0.07
AC007424.1-202ENST00000550548 FEZ1Q99689 392 aa15.49■□□□□ 0.07
AC007424.1-202ENST00000550548 ZBTB22O15209 634 aa15.48■□□□□ 0.07
AC007424.1-202ENST00000550548 CLSTN1O94985 981 aa15.48■□□□□ 0.07
AC007424.1-202ENST00000550548 KCNJ4P48050 445 aa15.48■□□□□ 0.07
AC007424.1-202ENST00000550548 TIGD1Q96MW7 591 aa15.48■□□□□ 0.07
AC007424.1-202ENST00000550548 TBC1D32Q96NH3 1257 aa15.48■□□□□ 0.07
AC007424.1-202ENST00000550548 PLCD4Q9BRC7 762 aa15.48■□□□□ 0.07
AC007424.1-202ENST00000550548 KIF3AQ9Y496 699 aa15.48■□□□□ 0.07
AC007424.1-202ENST00000550548 ZMYM4Q5VZL5 1548 aa15.48■□□□□ 0.07
AC007424.1-202ENST00000550548 SPATA31E1Q6ZUB1 1445 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms