RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-223ENST00000550442 ROCK1Q13464 1354 aa17■□□□□ 0.31
LETMD1-223ENST00000550442 MLH3Q9UHC1 1453 aa16.99■□□□□ 0.31
LETMD1-223ENST00000550442 ZNF142P52746 1687 aaPredicted RBP16.97■□□□□ 0.31
LETMD1-223ENST00000550442 NAIPQ13075 1403 aa16.96■□□□□ 0.3
LETMD1-223ENST00000550442 MYO3AQ8NEV4 1616 aa16.95■□□□□ 0.3
LETMD1-223ENST00000550442 CPS1P31327 1500 aa16.95■□□□□ 0.3
LETMD1-223ENST00000550442 ZMYM3Q14202 1370 aa16.94■□□□□ 0.3
LETMD1-223ENST00000550442 KIF14Q15058 1648 aa16.94■□□□□ 0.3
LETMD1-223ENST00000550442 TROQ12816 1431 aaPredicted RBP16.94■□□□□ 0.3
LETMD1-223ENST00000550442 CEP170BQ9Y4F5 1589 aaPredicted RBP16.94■□□□□ 0.3
LETMD1-223ENST00000550442 PTPRKQ15262 1439 aa16.91■□□□□ 0.3
LETMD1-223ENST00000550442 GCC2Q8IWJ2 1684 aa16.89■□□□□ 0.29
LETMD1-223ENST00000550442 KIDINS220Q9ULH0 1771 aa16.89■□□□□ 0.29
LETMD1-223ENST00000550442 CLTCQ00610 1675 aaKnown RBP16.88■□□□□ 0.29
LETMD1-223ENST00000550442 ITSN2Q9NZM3 1697 aa16.88■□□□□ 0.29
LETMD1-223ENST00000550442 CDC42BPBQ9Y5S2 1711 aa16.87■□□□□ 0.29
LETMD1-223ENST00000550442 SHANK2Q9UPX8 1470 aa16.86■□□□□ 0.29
LETMD1-223ENST00000550442 PPP1R15AO75807 674 aaPredicted RBP16.86■□□□□ 0.29
LETMD1-223ENST00000550442 POLR1AO95602 1720 aaPredicted RBP16.86■□□□□ 0.29
LETMD1-223ENST00000550442 ABCC1P33527 1531 aa16.86■□□□□ 0.29
LETMD1-223ENST00000550442 RSPH4AQ5TD94 716 aa16.85■□□□□ 0.29
LETMD1-223ENST00000550442 SENP3Q9H4L4 574 aaPredicted RBP16.84■□□□□ 0.29
LETMD1-223ENST00000550442 DNMT1P26358 1616 aaKnown RBP16.83■□□□□ 0.28
LETMD1-223ENST00000550442 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
LETMD1-223ENST00000550442 PREX2Q70Z35 1606 aa16.81■□□□□ 0.28
LETMD1-223ENST00000550442 A2ML1A8K2U0 1454 aa16.81■□□□□ 0.28
LETMD1-223ENST00000550442 DAPK1P53355 1430 aa16.81■□□□□ 0.28
LETMD1-223ENST00000550442 RGS17Q9UGC6 210 aaPredicted RBP16.79■□□□□ 0.28
LETMD1-223ENST00000550442 ADGRL2O95490 1459 aa16.79■□□□□ 0.28
LETMD1-223ENST00000550442 ALKQ9UM73 1620 aa16.78■□□□□ 0.28
LETMD1-223ENST00000550442 NEURL4Q96JN8 1562 aa16.78■□□□□ 0.28
LETMD1-223ENST00000550442 CFDP1Q9UEE9 299 aaPredicted RBP16.78■□□□□ 0.28
LETMD1-223ENST00000550442 GPATCH8Q9UKJ3 1502 aaKnown RBP16.77■□□□□ 0.28
LETMD1-223ENST00000550442 ABCC5O15440 1437 aa16.77■□□□□ 0.27
LETMD1-223ENST00000550442 SAMD9LQ8IVG5 1584 aa16.77■□□□□ 0.27
LETMD1-223ENST00000550442 GGT6Q6P531 493 aa16.75■□□□□ 0.27
LETMD1-223ENST00000550442 VWDEQ8N2E2 1590 aa16.75■□□□□ 0.27
LETMD1-223ENST00000550442 SPAG9O60271 1321 aaKnown RBP16.74■□□□□ 0.27
LETMD1-223ENST00000550442 MIER1Q8N108 512 aa16.74■□□□□ 0.27
LETMD1-223ENST00000550442 ANKRD30AQ9BXX3 1397 aa16.74■□□□□ 0.27
LETMD1-223ENST00000550442 ANKLE2Q86XL3 938 aa16.73■□□□□ 0.27
LETMD1-223ENST00000550442 RNF17Q9BXT8 1623 aaKnown RBP16.73■□□□□ 0.27
LETMD1-223ENST00000550442 NEUROD1Q13562 356 aa16.72■□□□□ 0.27
LETMD1-223ENST00000550442 A2MP01023 1474 aa16.72■□□□□ 0.27
LETMD1-223ENST00000550442 PLXNC1O60486 1568 aa16.72■□□□□ 0.27
LETMD1-223ENST00000550442 SIN3AQ96ST3 1273 aa16.71■□□□□ 0.27
LETMD1-223ENST00000550442 MPHOSPH9Q99550 1183 aa16.71■□□□□ 0.27
LETMD1-223ENST00000550442 CAMSAP2Q08AD1 1489 aa16.71■□□□□ 0.27
LETMD1-223ENST00000550442 ATP7AQ04656 1500 aa16.7■□□□□ 0.26
LETMD1-223ENST00000550442 CDC42BPAQ5VT25 1732 aa16.7■□□□□ 0.26
LETMD1-223ENST00000550442 ADGBQ8N7X0 1667 aa16.69■□□□□ 0.26
LETMD1-223ENST00000550442 POTEAQ6S8J7 498 aa16.69■□□□□ 0.26
LETMD1-223ENST00000550442 ZNF777Q9ULD5 760 aaPredicted RBP16.69■□□□□ 0.26
LETMD1-223ENST00000550442 SYNMO15061 1565 aa16.68■□□□□ 0.26
LETMD1-223ENST00000550442 TNRQ92752 1358 aa16.68■□□□□ 0.26
LETMD1-223ENST00000550442 TRIM52Q96A61 297 aa16.68■□□□□ 0.26
LETMD1-223ENST00000550442 RRP7BPQ9NSQ0 103 aa16.68■□□□□ 0.26
LETMD1-223ENST00000550442 SYCP2Q9BX26 1530 aa16.68■□□□□ 0.26
LETMD1-223ENST00000550442 NPHP4O75161 1426 aaPredicted RBP16.68■□□□□ 0.26
LETMD1-223ENST00000550442 ARHGEF5Q12774 1597 aa16.68■□□□□ 0.26
LETMD1-223ENST00000550442 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
LETMD1-223ENST00000550442 LRRC7Q96NW7 1537 aa16.67■□□□□ 0.26
LETMD1-223ENST00000550442 TSPY4P0CV99 314 aa16.67■□□□□ 0.26
LETMD1-223ENST00000550442 TSPY10P0CW01 314 aa16.67■□□□□ 0.26
LETMD1-223ENST00000550442 THEMISQ8N1K5 641 aaPredicted RBP16.67■□□□□ 0.26
LETMD1-223ENST00000550442 DEPDC5O75140 1603 aa16.67■□□□□ 0.26
LETMD1-223ENST00000550442 MED14O60244 1454 aa16.66■□□□□ 0.26
LETMD1-223ENST00000550442 IQGAP1P46940 1657 aa16.65■□□□□ 0.26
LETMD1-223ENST00000550442 SETD1AO15047 1707 aaKnown RBP16.65■□□□□ 0.26
LETMD1-223ENST00000550442 INO80Q9ULG1 1556 aaPredicted RBP16.65■□□□□ 0.26
LETMD1-223ENST00000550442 HNRNPMP52272 730 aaKnown RBP eCLIP16.64■□□□□ 0.25
LETMD1-223ENST00000550442 CHIC2Q9UKJ5 165 aa16.64■□□□□ 0.25
LETMD1-223ENST00000550442 STRCP1A6NGW2 1772 aa16.64■□□□□ 0.25
LETMD1-223ENST00000550442 ANKRD30BQ9BXX2 1392 aa16.64■□□□□ 0.25
LETMD1-223ENST00000550442 CROCC2H7BZ55 1655 aa16.63■□□□□ 0.25
LETMD1-223ENST00000550442 RPRD2Q5VT52 1461 aaKnown RBP16.63■□□□□ 0.25
LETMD1-223ENST00000550442 FAM135AQ9P2D6 1515 aa16.63■□□□□ 0.25
LETMD1-223ENST00000550442 CCER2I3L3R5 266 aa16.62■□□□□ 0.25
LETMD1-223ENST00000550442 KIAA1107Q9UPP5 1409 aa16.62■□□□□ 0.25
LETMD1-223ENST00000550442 UGGT1Q9NYU2 1555 aa16.61■□□□□ 0.25
LETMD1-223ENST00000550442 FBXO31Q5XUX0 539 aaPredicted RBP16.61■□□□□ 0.25
LETMD1-223ENST00000550442 PZPP20742 1482 aa16.6■□□□□ 0.25
LETMD1-223ENST00000550442 NLRP1Q9C000 1473 aa16.6■□□□□ 0.25
LETMD1-223ENST00000550442 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
LETMD1-223ENST00000550442 ANKRD50Q9ULJ7 1429 aa16.59■□□□□ 0.25
LETMD1-223ENST00000550442 KDM5DQ9BY66 1539 aa16.58■□□□□ 0.24
LETMD1-223ENST00000550442 MAST1Q9Y2H9 1570 aa16.55■□□□□ 0.24
LETMD1-223ENST00000550442 CCDC141Q6ZP82 1450 aa16.55■□□□□ 0.24
LETMD1-223ENST00000550442 ZNF644Q9H582 1327 aaPredicted RBP16.55■□□□□ 0.24
LETMD1-223ENST00000550442 EIF4G2P78344 907 aaKnown RBP eCLIP16.55■□□□□ 0.24
LETMD1-223ENST00000550442 FAM135BQ49AJ0 1406 aa16.54■□□□□ 0.24
LETMD1-223ENST00000550442 ANP32CO43423 234 aa16.53■□□□□ 0.24
LETMD1-223ENST00000550442 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
LETMD1-223ENST00000550442 UPF1Q92900 1129 aaKnown RBP eCLIP16.53■□□□□ 0.24
LETMD1-223ENST00000550442 MBD5Q9P267 1494 aa16.53■□□□□ 0.24
LETMD1-223ENST00000550442 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.24
LETMD1-223ENST00000550442 XIRP1Q702N8 1843 aaKnown RBP16.51■□□□□ 0.23
LETMD1-223ENST00000550442 ZC3H13Q5T200 1668 aaKnown RBP16.5■□□□□ 0.23
LETMD1-223ENST00000550442 KIF3BO15066 747 aa16.5■□□□□ 0.23
LETMD1-223ENST00000550442 DHX29Q7Z478 1369 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms